OpenContami

Open Cell Microbial Contaminants by High-throughput Sequencing
OpenContami is temporarlly out of service (2024.04.01~)

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Content of OpenContami DB

'Lymphocryptovirus' has been removed from the samples of CCLE, 1000 Genomes, and GEUVADIS
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BlackList
SARS-CoV-2 Genome Browser
SARS-CoV-2 Records

Latest Contaminants (>10^4 RPMH)
2023-08-23 OLP-105-1064 (OCT-105-1)
test
Alteromonas (1,397,947.86)
Synechococcus (150,516.80)
Pelomonas (51,066.93)
Bradyrhizobium (48,159.25)
Pseudomonas (13,536.61)

2023-08-10 OLP-104-1061 (OCT-104-1)
Skin contaminant
Cutibacterium (4,842,064,000.00)
Halomonas (3,045,643,000.00)
Shewanella (2,055,048,000.00)
Pseudomonas (1,796,600,000.00)
Ralstonia (1,548,359,000.00)

2022-11-30 OLP-72-882 (OCT-72-34)
EC ATAC Seq
Acholeplasma (791,003.80)

2022-11-29 OLP-72-881 (OCT-72-33)
EC ATAC Seq
Acholeplasma (790,777.69)

2022-11-28 OLP-72-880 (OCT-72-32)
EC ATAC Seq
Acholeplasma (443,797.57)