OpenContami

Open Cell Microbial Contaminants by High-throughput Sequencing

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Content of OpenContami DB

'Lymphocryptovirus' has been removed from the samples of CCLE, 1000 Genomes, and GEUVADIS
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BlackList
SARS-CoV-2 Genome Browser
SARS-CoV-2 Records

Latest Contaminants (>10^4 RPMH)
2021-01-20 OLP-1-693 (OCT-1-27)
SARSeq
Betacoronavirus (57,619.93)

2020-04-19 OLP-26-605 (OCT-26-2)
ATAC_mouse_LC
Mycoplasma (5,120,910.76)

2020-01-30 OLP-1-595 (OCT-1-18)
WHU03 (2019-nCov, Fu ...
Prevotella (2,391,681.59)
Veillonella (507,303.92)
Leptotrichia (69,977.42)
Porphyromonas (62,721.04)
Selenomonas (48,246.21)

2020-01-29 OLP-1-594 (OCT-1-24)
WHU02 (2019-nCov, Wu ...
Phix174microvirus (4,743,067.48)
Acinetobacter (4,691,682.51)
Betacoronavirus (361,502.81)
Veillonella (34,391.84)
Prevotella (16,977.88)

2019-08-07 OLP-1-569 (OCT-1-15)
Yersinia Spike-in
Yersinia (20,998.29)