#--------------------------------------------------------------------------- # Description: # 1. Symbol "#" indicates comment line # 2. Input file has to include "#ITEM: name1 name2 name3 ...." # 3. Each line has to be TAB deliminated; 'name[tab]0[tab]1[tab]1[tab]0...' # 4. Two columns for one item: '0[tab]1' means absence, '1[tab]0' means presence #--------------------------------------------------------------------------- # #ITEM: CCAAT OCT1 TATA E2F H4TF2 AC GC Human|H1|3024|-|6 1 0 0 1 1 0 0 1 0 1 1 0 1 0 Mouse|H1|80838|+|13 1 0 0 1 1 0 0 1 0 1 0 1 1 0 Human|H1|3006|-|6 1 0 0 1 1 0 0 1 0 1 1 0 0 1 Mouse|H1|50708|+|13 1 0 0 1 1 0 0 1 0 1 1 0 0 1 Human|H1|3007|-|6 1 0 0 1 1 0 1 0 0 1 1 0 0 1 Mouse|H1|14957|+|13 1 0 0 1 1 0 1 0 0 1 1 0 0 1 Human|H1|3008|+|6 1 0 0 1 1 0 0 1 0 1 1 0 0 1 Mouse|H1|50709|-|13 1 0 0 1 1 0 0 1 0 1 1 0 0 1 Human|H1|3009|-|6 1 0 0 1 1 0 1 0 0 1 1 0 0 1 Mouse|H1|56702|-|13 1 0 0 1 1 0 0 1 0 1 1 0 0 1 Human|H1|3005|+|22 0 1 0 1 0 1 1 0 1 0 1 0 1 0 Mouse|H1|14958|+|15 0 1 0 1 0 1 0 1 1 0 1 0 0 1 Human|H1|8971|-|3 0 1 0 1 1 0 0 1 1 0 1 0 0 1 Human|H1|132243|+|3 1 0 0 1 1 0 0 1 0 1 0 1 0 1 Mouse|H1|171506|+|6 1 0 0 1 1 0 0 1 0 1 0 1 0 1 Mouse|H1|107970|+|13 1 0 0 1 1 0 0 1 0 1 1 0 1 0 Rat|H1|24438|+|17 1 0 0 1 1 0 0 1 0 1 1 0 1 0 Human|H1|3010|-|6 1 0 0 1 1 0 0 1 0 1 1 0 1 0 Human|H2A|221613|-|6 1 0 1 0 1 0 0 1 0 1 0 1 0 1 Mouse|H2A|319163|+|13 1 0 1 0 1 0 0 1 0 1 1 0 0 1 Human|H2A|8335|-|6 1 0 1 0 1 0 0 1 0 1 0 1 0 1 Mouse|H2A|319172|+|13 1 0 1 0 0 1 1 0 0 1 1 0 0 1 Human|H2A|8334|+|6 1 0 1 0 0 1 0 1 0 1 0 1 0 1 Mouse|H2A|319164|-|13 1 0 1 0 1 0 0 1 0 1 0 1 0 1 Human|H2A|3012|+|6 1 0 1 0 1 0 0 1 0 1 0 1 0 1 Mouse|H2A|319166|-|13 1 0 1 0 0 1 1 0 0 1 1 0 0 1 Human|H2A|85235|+|6 1 0 1 0 1 0 1 0 0 1 0 1 0 1 Mouse|H2A|319168|-|13 1 0 1 0 0 1 1 0 0 1 0 1 0 1 Human|H2A|8330|-|6 1 0 0 1 0 1 1 0 0 1 0 1 0 1 Mouse|H2A|319169|-|13 1 0 0 1 1 0 1 0 0 1 0 1 0 1 Mouse|H2A|319173|+|13 1 0 1 0 0 1 1 0 0 1 0 1 0 1 Human|H2A|8969|+|6 1 0 1 0 1 0 1 0 0 1 0 1 0 1 Mouse|H2A|319191|+|13 1 0 0 1 1 0 1 0 0 1 1 0 0 1 Human|H2A|8331|-|6 1 0 1 0 0 1 1 0 0 1 0 1 0 1 Human|H2A|8332|+|6 1 0 1 0 0 1 1 0 0 1 0 1 1 0 Human|H2A|8336|-|6 1 0 1 0 1 0 1 0 0 1 0 1 0 1 Mouse|H2A|319170|-|13 1 0 1 0 1 0 1 0 0 1 1 0 0 1 Human|H2A|317772|-|1 1 0 0 1 0 1 0 1 0 1 1 0 1 0 Human|H2A|8338|+|1 1 0 1 0 1 0 0 1 0 1 1 0 1 0 Human|H2A|92815|-|1 1 0 1 0 0 1 0 1 0 1 0 1 0 1 Mouse|H2A|319162|+|11 1 0 1 0 0 1 0 1 0 1 0 1 0 1 Human|H2A|3014|-|11 1 0 0 1 1 0 0 1 0 1 0 1 1 0 Mouse|H2A|15270|+|9 1 0 0 1 0 1 0 1 0 1 0 1 0 1 Rat|H2A|29384|+|17 0 1 0 1 0 1 0 1 0 1 0 1 1 0 Human|H2A|3015|-|4 1 0 0 1 1 0 0 1 0 1 0 1 0 1 Mouse|H2A|51788|+|3 1 0 0 1 1 0 0 1 0 1 0 1 0 1 Rat|H2A|24828|-|17 1 0 1 0 1 0 0 1 0 1 0 1 0 1 Mouse|H2B|319177|-|13 1 0 1 0 1 0 0 1 0 1 1 0 0 1 Human|H2B|255626|+|6 1 0 1 0 1 0 0 1 0 1 1 0 0 1 Human|H2B|3018|-|6 1 0 1 0 1 0 0 1 0 1 1 0 1 0 Mouse|H2B|319178|+|13 1 0 1 0 0 1 0 1 0 1 1 0 0 1 Human|H2B|8347|-|6 1 0 1 0 1 0 0 1 0 1 0 1 0 1 Mouse|H2B|68024|+|13 1 0 1 0 1 0 0 1 0 1 0 1 0 1 Mouse|H2B|319179|-|13 1 0 1 0 0 1 0 1 0 1 0 1 0 1 Human|H2B|8344|+|6 1 0 1 0 0 1 0 1 0 1 0 1 0 1 Mouse|H2B|319180|-|13 1 0 1 0 0 1 1 0 0 1 0 1 0 1 Human|H2B|8343|+|6 1 0 1 0 0 1 0 1 0 1 0 1 0 1 Mouse|H2B|319182|-|13 1 0 1 0 0 1 0 1 1 0 0 1 0 1 Human|H2B|8345|+|6 1 0 1 0 0 1 0 1 0 1 1 0 0 1 Human|H2B|85236|-|6 1 0 1 0 1 0 1 0 0 1 0 1 0 1 Mouse|H2B|319184|+|13 1 0 1 0 0 1 1 0 0 1 0 1 0 1 Human|H2B|8340|-|6 1 0 0 1 0 1 1 0 0 1 0 1 0 1 Mouse|H2B|319185|-|13 1 0 0 1 1 0 1 0 0 1 1 0 0 1 Human|H2B|8342|+|6 1 0 1 0 0 1 1 0 0 1 0 1 0 1 Mouse|H2B|319186|+|13 1 0 1 0 0 1 0 1 0 1 1 0 1 0 Human|H2B|8341|+|6 1 0 0 1 0 1 1 0 0 1 0 1 0 1 Mouse|H2B|319187|+|13 1 0 0 1 1 0 1 0 0 1 0 1 0 1 Human|H2B|8339|-|6 1 0 1 0 1 0 0 1 0 1 0 1 0 1 Human|H2B|8346|+|6 1 0 1 0 0 1 0 1 0 1 0 1 0 1 Human|H2B|8970|-|6 1 0 1 0 1 0 1 0 0 1 0 1 0 1 Human|H2B|8348|+|6 1 0 1 0 1 0 1 0 0 1 0 1 0 1 Mouse|H2B|319188|+|13 1 0 1 0 1 0 1 0 0 1 0 1 0 1 Rat|H2B|64647|+|17 1 0 0 1 0 1 1 0 0 1 1 0 0 1 Mouse|H2B|319189|+|3 1 0 1 0 1 0 0 1 0 1 0 1 1 0 Human|H2B|8349|-|1 1 0 1 0 0 1 0 1 0 1 0 1 1 0 Mouse|H2B|78303|+|11 1 0 1 0 0 1 0 1 0 1 0 1 0 1 Human|H2B|128312|+|1 1 0 1 0 0 1 0 1 0 1 0 1 0 1 Rat|H2B|24829|+|17 1 0 1 0 1 0 0 1 0 1 0 1 0 1 Human|H3|8350|+|6 1 0 0 1 1 0 0 1 0 1 0 1 0 1 Mouse|H3|360198|-|13 1 0 0 1 1 0 0 1 0 1 1 0 0 1 Human|H3|8358|-|6 1 0 0 1 0 1 0 1 0 1 0 1 0 1 Mouse|H3|319150|+|13 1 0 0 1 1 0 0 1 0 1 0 1 1 0 Human|H3|8352|+|6 1 0 0 1 0 1 0 1 0 1 1 0 0 1 Mouse|H3|319148|-|13 1 0 0 1 0 1 0 1 0 1 0 1 0 1 Human|H3|8353|+|6 1 0 0 1 0 1 0 1 0 1 0 1 0 1 Mouse|H3|319151|-|13 1 0 0 1 0 1 0 1 0 1 0 1 0 1 Human|H3|8968|-|6 1 0 0 1 0 1 1 0 0 1 0 1 0 1 Human|H3|8355|-|6 1 0 0 1 0 1 0 1 0 1 0 1 0 1 Mouse|H3|97908|+|13 1 0 0 1 0 1 0 1 0 1 0 1 0 1 Human|H3|8354|-|6 1 0 0 1 1 0 0 1 0 1 1 0 0 1 Mouse|H3|319153|-|13 1 0 0 1 0 1 0 1 0 1 0 1 0 1 Mouse|H3|319149|+|13 1 0 1 0 0 1 1 0 0 1 0 1 0 1 Mouse|H3|319152|+|13 1 0 0 1 0 1 0 1 0 1 0 1 0 1 Human|H3|8356|-|6 1 0 0 1 0 1 0 1 0 1 0 1 0 1 Mouse|H3|97114|-|3 0 1 0 1 0 1 0 1 0 1 0 1 1 0 Human|H3|3020|+|1 1 0 0 1 0 1 0 1 0 1 1 0 1 0 Mouse|H3|15078|-|1 1 0 0 1 0 1 0 1 0 1 1 0 1 0 Human|H3|3021|-|17 1 0 1 0 0 1 0 1 0 1 0 1 0 1 Rat|H3|117056|-|10 1 0 1 0 0 1 0 1 0 1 0 1 0 1 Human|H3|8290|-|1 1 0 0 1 1 0 0 1 0 1 0 1 0 1 Human|H4|8359|+|6 1 0 0 1 1 0 1 0 0 1 0 1 1 0 Mouse|H4|326619|-|13 1 0 0 1 1 0 1 0 0 1 1 0 1 0 Human|H4|8366|-|6 0 1 0 1 1 0 1 0 1 0 0 1 1 0 Mouse|H4|326620|+|13 0 1 0 1 0 1 0 1 1 0 0 1 0 1 Human|H4|8364|+|6 1 0 0 1 0 1 0 1 1 0 0 1 0 1 Mouse|H4|319155|-|13 1 0 1 0 0 1 0 1 1 0 0 1 1 0 Human|H4|8360|-|6 0 1 0 1 1 0 0 1 1 0 0 1 1 0 Mouse|H4|319156|+|13 0 1 0 1 1 0 0 1 1 0 0 1 0 1 Human|H4|8361|+|6 0 1 0 1 1 0 1 0 1 0 1 0 1 0 Mouse|H4|319157|-|13 0 1 0 1 1 0 0 1 1 0 0 1 1 0 Human|H4|8365|-|6 0 1 0 1 0 1 0 1 1 0 1 0 1 0 Mouse|H4|69386|+|13 0 1 0 1 0 1 0 1 1 0 1 0 1 0 Human|H4|8363|+|6 0 1 0 1 1 0 1 0 1 0 0 1 1 0 Mouse|H4|319159|+|13 0 1 0 1 1 0 0 1 1 0 1 0 1 0 Human|H4|8362|-|6 0 1 0 1 1 0 0 1 1 0 0 1 1 0 Mouse|H4|319160|-|13 0 1 0 1 1 0 0 1 1 0 1 0 1 0 Human|H4|8367|+|6 0 1 0 1 0 1 0 1 1 0 0 1 0 1 Human|H4|8369|-|6 0 1 0 1 1 0 1 0 0 1 0 1 0 1 Human|H4|8294|+|6 0 1 0 1 0 1 0 1 1 0 1 0 1 0 Human|H4|8368|-|6 0 1 0 1 1 0 0 1 1 0 0 1 0 1 Rat|H4|64627|-|17 1 0 0 1 0 1 0 1 1 0 0 1 1 0 Mouse|H4|97122|-|3 0 1 0 1 0 1 0 1 1 0 1 0 1 0 Human|H4|121504|-|12 0 1 0 1 0 1 0 1 1 0 0 1 1 0 Mouse|H4|320332|-|6 0 1 0 1 0 1 0 1 1 0 1 0 1 0