#Unique_Reads Genus Species # 4 reads uniquely mapped to Achromobacter (multi-hits among diff. species in Achromobacter allowed) 3 Achromobacter Achromobacter xylosoxidans 1 Achromobacter Achromobacter sp. DMS1 # 4 reads uniquely mapped to Acidovorax (multi-hits among diff. species in Acidovorax allowed) 2 Acidovorax Acidovorax sp. RAC01 1 Acidovorax Acidovorax citrulli AAC00-1 1 Acidovorax Acidovorax sp. KKS102 # 59501 reads uniquely mapped to Acinetobacter (multi-hits among diff. species in Acinetobacter allowed) 59489 Acinetobacter Acinetobacter rudis 4 Acinetobacter Acinetobacter baumannii 2 Acinetobacter Acinetobacter pittii PHEA-2 1 Acinetobacter Acinetobacter sp. NCu2D-2 1 Acinetobacter NZ_CP015483 1 Acinetobacter Acinetobacter gyllenbergii NIPH 230 1 Acinetobacter Acinetobacter pittii 1 Acinetobacter Acinetobacter gerneri DSM 14967 = CIP 107464 1 Acinetobacter Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 # 8 reads uniquely mapped to Aerococcus (multi-hits among diff. species in Aerococcus allowed) 5 Aerococcus Aerococcus viridans 1 Aerococcus Aerococcus urinaeequi 1 Aerococcus Aerococcus sanguinicola 1 Aerococcus Aerococcus urinae # 1 reads uniquely mapped to Aeromicrobium (multi-hits among diff. species in Aeromicrobium allowed) 1 Aeromicrobium Aeromicrobium sp. Root495 # 10 reads uniquely mapped to Aliihoeflea (multi-hits among diff. species in Aliihoeflea allowed) 10 Aliihoeflea Aliihoeflea sp. 2WW # 88 reads uniquely mapped to Bacillus (multi-hits among diff. species in Bacillus allowed) 42 Bacillus Bacillus badius 41 Bacillus Bacillus weihenstephanensis 2 Bacillus Bacillus thermotolerans 1 Bacillus Bacillus safensis 1 Bacillus Bacillus subtilis subsp. subtilis str. RO-NN-1 1 Bacillus Bacillus thuringiensis MC28 # 59535 reads uniquely mapped to Brachybacterium (multi-hits among diff. species in Brachybacterium allowed) 59534 Brachybacterium Brachybacterium muris UCD-AY4 1 Brachybacterium Brachybacterium paraconglomeratum LC44 # 6 reads uniquely mapped to Bradyrhizobium (multi-hits among diff. species in Bradyrhizobium allowed) 2 Bradyrhizobium Bradyrhizobium sp. BTAi1 1 Bradyrhizobium Bradyrhizobium sp. S23321 1 Bradyrhizobium Bradyrhizobium valentinum 1 Bradyrhizobium Bradyrhizobium sp. LTSP885 1 Bradyrhizobium Bradyrhizobium lablabi # 7 reads uniquely mapped to Brevibacterium (multi-hits among diff. species in Brevibacterium allowed) 5 Brevibacterium Brevibacterium casei S18 1 Brevibacterium Brevibacterium linens 1 Brevibacterium Brevibacterium mcbrellneri ATCC 49030 # 9 reads uniquely mapped to Burkholderia (multi-hits among diff. species in Burkholderia allowed) 1 Burkholderia Candidatus Burkholderia crenata 1 Burkholderia Burkholderia sp. PAMC 28687 1 Burkholderia Burkholderia ubonensis 1 Burkholderia Burkholderia cenocepacia 1 Burkholderia Burkholderia ubonensis MSMB22 1 Burkholderia Burkholderia multivorans 1 Burkholderia Burkholderia contaminans 1 Burkholderia Burkholderia pseudomallei HBPUB10134a 1 Burkholderia Burkholderia lata # 294 reads uniquely mapped to Campylobacter (multi-hits among diff. species in Campylobacter allowed) 293 Campylobacter Campylobacter mucosalis 1 Campylobacter Campylobacter cuniculorum DSM 23162 = LMG 24588 # 5 reads uniquely mapped to Caulobacter (multi-hits among diff. species in Caulobacter allowed) 4 Caulobacter Caulobacter henricii 1 Caulobacter Caulobacter vibrioides # 22 reads uniquely mapped to Chryseobacterium (multi-hits among diff. species in Chryseobacterium allowed) 21 Chryseobacterium Chryseobacterium sp. JAH 1 Chryseobacterium Chryseobacterium koreense CCUG 49689 # 4 reads uniquely mapped to Comamonas (multi-hits among diff. species in Comamonas allowed) 2 Comamonas Comamonas kerstersii 1 Comamonas Comamonas testosteroni P19 1 Comamonas Comamonas composti DSM 21721 # 9 reads uniquely mapped to Corynebacterium (multi-hits among diff. species in Corynebacterium allowed) 3 Corynebacterium Corynebacterium pseudotuberculosis 2 Corynebacterium Corynebacterium lipophiloflavum DSM 44291 1 Corynebacterium Corynebacterium aurimucosum 1 Corynebacterium Corynebacterium diphtheriae C7 (beta) 1 Corynebacterium Corynebacterium frankenforstense DSM 45800 1 Corynebacterium Corynebacterium kroppenstedtii DSM 44385 # 4 reads uniquely mapped to Cupriavidus (multi-hits among diff. species in Cupriavidus allowed) 1 Cupriavidus Ralstonia eutropha H16 1 Cupriavidus Cupriavidus metallidurans CH34 1 Cupriavidus Cupriavidus gilardii CR3 1 Cupriavidus Cupriavidus sp. USMAA2-4 # 75 reads uniquely mapped to Cutibacterium (multi-hits among diff. species in Cutibacterium allowed) 27 Cutibacterium Cutibacterium acnes 8 Cutibacterium Propionibacterium acnes C1 7 Cutibacterium Propionibacterium acnes subsp. defendens ATCC 11828 5 Cutibacterium Propionibacterium acnes 6609 4 Cutibacterium Propionibacterium acnes TypeIA2 P.acn31 4 Cutibacterium Propionibacterium acnes hdn-1 4 Cutibacterium Propionibacterium acnes TypeIA2 P.acn17 3 Cutibacterium Cutibacterium granulosum DSM 20700 3 Cutibacterium Propionibacterium acnes SK137 3 Cutibacterium Propionibacterium acnes TypeIA2 P.acn33 3 Cutibacterium Propionibacterium acnes 266 2 Cutibacterium [Propionibacterium] namnetense SK182B-JCVI 1 Cutibacterium Propionibacterium acnes HL096PA1 1 Cutibacterium Propionibacterium acnes KPA171202 # 4 reads uniquely mapped to Dechloromonas (multi-hits among diff. species in Dechloromonas allowed) 3 Dechloromonas Dechloromonas agitata is5 1 Dechloromonas Dechloromonas aromatica RCB # 3 reads uniquely mapped to Delftia (multi-hits among diff. species in Delftia allowed) 1 Delftia Delftia tsuruhatensis 1 Delftia Delftia sp. HK171 1 Delftia Delftia acidovorans SPH-1 # 7 reads uniquely mapped to Dietzia (multi-hits among diff. species in Dietzia allowed) 4 Dietzia Dietzia maris 2 Dietzia Dietzia sp. UCD-THP 1 Dietzia Dietzia alimentaria 72 # 7 reads uniquely mapped to Enterococcus (multi-hits among diff. species in Enterococcus allowed) 3 Enterococcus Enterococcus faecium 1 Enterococcus Enterococcus faecium T110 1 Enterococcus Enterococcus durans 1 Enterococcus Enterococcus casseliflavus EC20 1 Enterococcus Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 # 405 reads uniquely mapped to Escherichia (multi-hits among diff. species in Escherichia allowed) 239 Escherichia Escherichia coli 28 Escherichia Escherichia coli K-12 13 Escherichia Escherichia coli str. K-12 substr. MG1655 10 Escherichia Escherichia coli O157:H7 6 Escherichia Escherichia coli BL21(DE3) 6 Escherichia Escherichia coli UMNK88 6 Escherichia Escherichia coli BW25113 4 Escherichia Escherichia coli KO11FL 4 Escherichia Escherichia coli O157:H7 str. SS52 4 Escherichia Escherichia coli str. Sanji 4 Escherichia Escherichia coli BW2952 4 Escherichia NZ_CP014670 4 Escherichia Escherichia coli O104:H4 str. 2009EL-2071 3 Escherichia Escherichia coli KLY 3 Escherichia Escherichia coli B 3 Escherichia Escherichia coli DH1 3 Escherichia Escherichia coli PCN061 3 Escherichia Escherichia coli ETEC H10407 3 Escherichia Escherichia coli str. K-12 substr. DH10B 3 Escherichia Escherichia coli ER2796 2 Escherichia Escherichia coli P12b 2 Escherichia Escherichia coli O145:H28 str. RM13516 2 Escherichia Escherichia coli SMS-3-5 2 Escherichia Escherichia coli SE11 2 Escherichia Escherichia coli SE15 2 Escherichia Escherichia coli VR50 2 Escherichia Escherichia coli O55:H7 str. RM12579 2 Escherichia Escherichia coli O145:H28 str. RM13514 2 Escherichia NZ_CP018770 2 Escherichia Escherichia coli O157 2 Escherichia Escherichia coli 'BL21-Gold(DE3)pLysS AG' 2 Escherichia Escherichia coli ECC-1470 2 Escherichia Escherichia coli 55989 2 Escherichia Escherichia coli O157:H7 str. EDL933 1 Escherichia Escherichia coli O157:H7 str. SS17 1 Escherichia Escherichia fergusonii ATCC 35469 1 Escherichia Escherichia coli O103:H2 str. 12009 1 Escherichia Escherichia coli O139:H28 str. E24377A 1 Escherichia Escherichia coli O55:H7 str. CB9615 1 Escherichia Escherichia coli PCN033 1 Escherichia Escherichia coli UTI89 1 Escherichia Escherichia coli 536 1 Escherichia Escherichia coli str. K-12 substr. MDS42 1 Escherichia Escherichia coli O157:H16 1 Escherichia Escherichia coli str. K-12 substr. MC4100 1 Escherichia Escherichia coli O157:H7 str. Sakai 1 Escherichia Escherichia coli ATCC 8739 1 Escherichia Escherichia coli 1303 1 Escherichia Escherichia coli Xuzhou21 1 Escherichia Escherichia coli O157:H7 str. TW14359 1 Escherichia NZ_CP014197 1 Escherichia Escherichia coli APEC O78 1 Escherichia Escherichia coli 042 1 Escherichia Escherichia coli str. 'clone D i2' 1 Escherichia Escherichia coli RS218 1 Escherichia Escherichia coli IAI1 1 Escherichia Escherichia coli IAI39 1 Escherichia Escherichia coli O26:H11 str. 11368 # 60227 reads uniquely mapped to Flavobacterium (multi-hits among diff. species in Flavobacterium allowed) 60225 Flavobacterium Flavobacterium succinicans LMG 10402 1 Flavobacterium Flavobacterium sp. PK15 1 Flavobacterium Flavobacterium sp. B17 # 3 reads uniquely mapped to Gemella (multi-hits among diff. species in Gemella allowed) 2 Gemella Gemella haemolysans ATCC 10379 1 Gemella Gemella sp. oral taxon 928 # 5 reads uniquely mapped to Granulicatella (multi-hits among diff. species in Granulicatella allowed) 3 Granulicatella Granulicatella elegans ATCC 700633 2 Granulicatella Granulicatella adiacens ATCC 49175 # 5 reads uniquely mapped to Haemophilus (multi-hits among diff. species in Haemophilus allowed) 3 Haemophilus [Haemophilus] ducreyi 1 Haemophilus Haemophilus influenzae 1 Haemophilus [Haemophilus] parasuis # 3 reads uniquely mapped to Jeotgalicoccus (multi-hits among diff. species in Jeotgalicoccus allowed) 1 Jeotgalicoccus Jeotgalicoccus psychrophilus DSM 19085 1 Jeotgalicoccus Jeotgalicoccus marinus DSM 19772 1 Jeotgalicoccus Jeotgalicoccus saudimassiliensis # 1 reads uniquely mapped to Kocuria (multi-hits among diff. species in Kocuria allowed) 1 Kocuria Kocuria kristinae # 4 reads uniquely mapped to Massilia (multi-hits among diff. species in Massilia allowed) 2 Massilia Massilia sp. WG5 1 Massilia Massilia timonae 1 Massilia Massilia sp. 9096 # 5 reads uniquely mapped to Meiothermus (multi-hits among diff. species in Meiothermus allowed) 3 Meiothermus Meiothermus cerbereus DSM 11376 2 Meiothermus Meiothermus silvanus DSM 9946 # 59861 reads uniquely mapped to Mesorhizobium (multi-hits among diff. species in Mesorhizobium allowed) 30044 Mesorhizobium Mesorhizobium plurifarium 29811 Mesorhizobium Mesorhizobium sp. ORS3324 3 Mesorhizobium Mesorhizobium sp. B7 1 Mesorhizobium Mesorhizobium opportunistum WSM2075 1 Mesorhizobium Mesorhizobium sp. LC103 1 Mesorhizobium Mesorhizobium alhagi CCNWXJ12-2 # 59900 reads uniquely mapped to Microbacterium (multi-hits among diff. species in Microbacterium allowed) 59898 Microbacterium Microbacterium sp. C448 1 Microbacterium Microbacterium luticocti DSM 19459 1 Microbacterium Microbacterium chocolatum # 8 reads uniquely mapped to Micrococcus (multi-hits among diff. species in Micrococcus allowed) 8 Micrococcus Micrococcus luteus NCTC 2665 # 7 reads uniquely mapped to Mycoplasma (multi-hits among diff. species in Mycoplasma allowed) 4 Mycoplasma Mycoplasma mycoides subsp. capri 1 Mycoplasma Mycoplasma mycoides subsp. mycoides SC str. PG1 1 Mycoplasma Mycoplasma synoviae ATCC 25204 1 Mycoplasma Mycoplasma mycoides subsp. capri str. GM12 # 3 reads uniquely mapped to Nesterenkonia (multi-hits among diff. species in Nesterenkonia allowed) 2 Nesterenkonia Nesterenkonia jeotgali 1 Nesterenkonia Nesterenkonia massiliensis # 1570 reads uniquely mapped to Nocardia (multi-hits among diff. species in Nocardia allowed) 505 Nocardia Nocardia brevicatena NBRC 12119 471 Nocardia Nocardia pneumoniae NBRC 100136 198 Nocardia Nocardia jiangxiensis NBRC 101359 164 Nocardia Nocardia niigatensis NBRC 100131 157 Nocardia Nocardia veterana NBRC 100344 75 Nocardia Nocardia otitidiscaviarum NBRC 14405 # 1 reads uniquely mapped to Nocardioides (multi-hits among diff. species in Nocardioides allowed) 1 Nocardioides Nocardioides sp. Soil797 # 6 reads uniquely mapped to Paraburkholderia (multi-hits among diff. species in Paraburkholderia allowed) 3 Paraburkholderia Paraburkholderia fungorum 1 Paraburkholderia Paraburkholderia andropogonis 1 Paraburkholderia Paraburkholderia caribensis MBA4 1 Paraburkholderia Paraburkholderia caribensis # 4 reads uniquely mapped to Paracoccus (multi-hits among diff. species in Paracoccus allowed) 2 Paracoccus Paracoccus sp. 228 1 Paracoccus Paracoccus yeei ATCC BAA-599 1 Paracoccus Paracoccus aminovorans # 1 reads uniquely mapped to Prevotella (multi-hits among diff. species in Prevotella allowed) 1 Prevotella Prevotella disiens JCM 6334 = ATCC 29426 # 59554 reads uniquely mapped to Pseudomonas (multi-hits among diff. species in Pseudomonas allowed) 59543 Pseudomonas Pseudomonas pelagia CL-AP6 2 Pseudomonas Pseudomonas aeruginosa 1 Pseudomonas Pseudomonas sp. LPH1 1 Pseudomonas Pseudomonas amygdali pv. lachrymans 1 Pseudomonas Pseudomonas veronii 1 Pseudomonas Pseudomonas parafulva 1 Pseudomonas Pseudomonas protegens CHA0 1 Pseudomonas Pseudomonas versuta 1 Pseudomonas Pseudomonas fluorescens 1 Pseudomonas Pseudomonas chlororaphis 1 Pseudomonas Pseudomonas fluorescens F113 # 19 reads uniquely mapped to Ralstonia (multi-hits among diff. species in Ralstonia allowed) 10 Ralstonia Ralstonia pickettii 12J 6 Ralstonia Ralstonia insidiosa 1 Ralstonia Ralstonia pickettii 12D 1 Ralstonia Ralstonia solanacearum 1 Ralstonia Ralstonia mannitolilytica # 1 reads uniquely mapped to Rhodococcus (multi-hits among diff. species in Rhodococcus allowed) 1 Rhodococcus Rhodococcus fascians D188 # 50 reads uniquely mapped to Shewanella (multi-hits among diff. species in Shewanella allowed) 46 Shewanella Shewanella benthica KT99 2 Shewanella Shewanella psychrophila 1 Shewanella Shewanella putrefaciens 200 1 Shewanella Shewanella frigidimarina NCIMB 400 # 12 reads uniquely mapped to Sphingomonas (multi-hits among diff. species in Sphingomonas allowed) 2 Sphingomonas Sphingomonas sp. Leaf33 2 Sphingomonas Sphingomonas taxi 1 Sphingomonas Sphingomonas jaspsi DSM 18422 1 Sphingomonas Sphingomonas sp. Root241 1 Sphingomonas Sphingomonas paucimobilis NBRC 13935 1 Sphingomonas Sphingomonas wittichii RW1 1 Sphingomonas Sphingomonas echinoides ATCC 14820 1 Sphingomonas Sphingomonas melonis TY 1 Sphingomonas Sphingomonas sp. Leaf357 1 Sphingomonas Sphingomonas sp. ERG5 # 127 reads uniquely mapped to Staphylococcus (multi-hits among diff. species in Staphylococcus allowed) 31 Staphylococcus Staphylococcus epidermidis 22 Staphylococcus Staphylococcus capitis subsp. capitis 16 Staphylococcus Staphylococcus epidermidis PM221 16 Staphylococcus Staphylococcus epidermidis ATCC 12228 14 Staphylococcus Staphylococcus epidermidis RP62A 11 Staphylococcus Staphylococcus capitis 10 Staphylococcus Staphylococcus hominis subsp. hominis C80 2 Staphylococcus Staphylococcus pasteuri SP1 1 Staphylococcus Staphylococcus aureus subsp. aureus Tager 104 1 Staphylococcus Staphylococcus haemolyticus 1 Staphylococcus Staphylococcus aureus subsp. aureus ST228 1 Staphylococcus Staphylococcus aureus 1 Staphylococcus Staphylococcus aureus subsp. aureus # 10 reads uniquely mapped to Streptococcus (multi-hits among diff. species in Streptococcus allowed) 2 Streptococcus Streptococcus mitis B6 1 Streptococcus Streptococcus criceti HS-6 1 Streptococcus Streptococcus mutans GS-5 1 Streptococcus Streptococcus salivarius CCHSS3 1 Streptococcus Streptococcus oralis subsp. tigurinus AZ_3a 1 Streptococcus Streptococcus pseudopneumoniae IS7493 1 Streptococcus Streptococcus sp. FDAARGOS_192 1 Streptococcus Streptococcus pneumoniae 1 Streptococcus Streptococcus infantis ATCC 700779 # 5 reads uniquely mapped to Tepidimonas (multi-hits among diff. species in Tepidimonas allowed) 5 Tepidimonas Tepidimonas taiwanensis # 4 reads uniquely mapped to Thermus (multi-hits among diff. species in Thermus allowed) 1 Thermus Thermus filiformis 1 Thermus Thermus igniterrae ATCC 700962 1 Thermus Thermus scotoductus SA-01 1 Thermus Thermus oshimai JL-2