#Unique_Reads Genus Species # 4756 reads uniquely mapped to Acaryochloris (multi-hits among diff. species in Acaryochloris allowed) 4756 Acaryochloris Acaryochloris marina MBIC11017 # 13726 reads uniquely mapped to Acetobacter (multi-hits among diff. species in Acetobacter allowed) 3442 Acetobacter Acetobacter pasteurianus subsp. paradoxus 3274 Acetobacter Acetobacter senegalensis 2896 Acetobacter Acetobacter persici 1419 Acetobacter Acetobacter pasteurianus subsp. ascendens 726 Acetobacter Acetobacter ghanensis 677 Acetobacter Acetobacter papayae JCM 25143 224 Acetobacter Acetobacter aceti NBRC 14818 193 Acetobacter Acetobacter aceti 124 Acetobacter Acetobacter nitrogenifigens DSM 23921 = LMG 23498 67 Acetobacter Acetobacter sp. SLV-7 57 Acetobacter Acetobacter cibinongensis 4H-1 57 Acetobacter Acetobacter pasteurianus IFO 3283-03 56 Acetobacter Acetobacter pasteurianus IFO 3283-26 54 Acetobacter Acetobacter pasteurianus IFO 3283-01 54 Acetobacter Acetobacter pasteurianus IFO 3283-07 51 Acetobacter Acetobacter pasteurianus 386B 51 Acetobacter Acetobacter pasteurianus IFO 3283-22 47 Acetobacter Acetobacter pasteurianus 46 Acetobacter Acetobacter malorum 44 Acetobacter Acetobacter pasteurianus NBRC 101655 44 Acetobacter Acetobacter pasteurianus IFO 3283-01-42C 43 Acetobacter Acetobacter pasteurianus IFO 3283-32 42 Acetobacter Acetobacter pasteurianus IFO 3283-12 27 Acetobacter Acetobacter orientalis 21F-2 11 Acetobacter Acetobacter indonesiensis 5H-1 # 61520 reads uniquely mapped to Achromobacter (multi-hits among diff. species in Achromobacter allowed) 22107 Achromobacter Achromobacter xylosoxidans 9683 Achromobacter Achromobacter insolitus 7455 Achromobacter Achromobacter xylosoxidans A8 7340 Achromobacter Achromobacter denitrificans 7336 Achromobacter Achromobacter xylosoxidans C54 3912 Achromobacter Achromobacter denitrificans NBRC 15125 3687 Achromobacter Achromobacter sp. DMS1 # 3368 reads uniquely mapped to Acidimicrobium (multi-hits among diff. species in Acidimicrobium allowed) 3368 Acidimicrobium Acidimicrobium ferrooxidans DSM 10331 # 51903 reads uniquely mapped to Acidovorax (multi-hits among diff. species in Acidovorax allowed) 8774 Acidovorax Acidovorax sp. RAC01 8722 Acidovorax Acidovorax sp. KKS102 8029 Acidovorax Acidovorax sp. Root217 7659 Acidovorax Acidovorax ebreus TPSY 7604 Acidovorax Acidovorax sp. JS42 3960 Acidovorax Acidovorax radicis N35 3607 Acidovorax Acidovorax sp. Leaf160 1483 Acidovorax Acidovorax avenae subsp. avenae ATCC 19860 1218 Acidovorax Acidovorax citrulli AAC00-1 847 Acidovorax Acidovorax caeni # 95929 reads uniquely mapped to Acinetobacter (multi-hits among diff. species in Acinetobacter allowed) 42904 Acinetobacter Acinetobacter baumannii 3578 Acinetobacter Acinetobacter pittii 2143 Acinetobacter Acinetobacter schindleri 2040 Acinetobacter Acinetobacter lwoffii NCTC 5866 = CIP 64.10 = NIPH 512 2009 Acinetobacter Acinetobacter calcoaceticus 1931 Acinetobacter Acinetobacter sp. TGL-Y2 1702 Acinetobacter Acinetobacter nectaris CIP 110549 1445 Acinetobacter Acinetobacter equi 1339 Acinetobacter Acinetobacter sp. TTH0-4 1336 Acinetobacter Acinetobacter indicus CIP 110367 1298 Acinetobacter Acinetobacter johnsonii XBB1 1258 Acinetobacter NZ_CP015483 1255 Acinetobacter Acinetobacter baumannii MDR-ZJ06 1237 Acinetobacter Acinetobacter baumannii BJAB07104 1186 Acinetobacter Acinetobacter baumannii BJAB0868 1096 Acinetobacter Acinetobacter baumannii MDR-TJ 1060 Acinetobacter Acinetobacter nosocomialis 1016 Acinetobacter Acinetobacter baumannii NCGM 237 1011 Acinetobacter Acinetobacter baumannii 1656-2 1004 Acinetobacter Acinetobacter baumannii AB307-0294 985 Acinetobacter Acinetobacter baumannii DU202 983 Acinetobacter NC_011586 978 Acinetobacter Acinetobacter baumannii ACICU 967 Acinetobacter Acinetobacter baumannii LAC-4 954 Acinetobacter Acinetobacter baumannii AYE 945 Acinetobacter Acinetobacter baumannii D1279779 935 Acinetobacter Acinetobacter baumannii BJAB0715 922 Acinetobacter Acinetobacter soli 918 Acinetobacter Acinetobacter haemolyticus 914 Acinetobacter Acinetobacter baumannii ZW85-1 910 Acinetobacter Acinetobacter brisouii CIP 110357 887 Acinetobacter Acinetobacter sp. ADP1 884 Acinetobacter Acinetobacter gerneri DSM 14967 = CIP 107464 880 Acinetobacter Acinetobacter oleivorans DR1 857 Acinetobacter Acinetobacter beijerinckii CIP 110307 824 Acinetobacter Acinetobacter bohemicus ANC 3994 808 Acinetobacter Acinetobacter gyllenbergii NIPH 230 799 Acinetobacter Acinetobacter baumannii TYTH-1 763 Acinetobacter Acinetobacter junii 761 Acinetobacter Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 701 Acinetobacter Acinetobacter larvae 668 Acinetobacter Acinetobacter bereziniae LMG 1003 = CIP 70.12 642 Acinetobacter Acinetobacter ursingii DSM 16037 = CIP 107286 628 Acinetobacter Acinetobacter parvus DSM 16617 = CIP 108168 616 Acinetobacter Acinetobacter bouvetii DSM 14964 = CIP 107468 565 Acinetobacter Acinetobacter harbinensis 522 Acinetobacter Acinetobacter sp. NCu2D-2 385 Acinetobacter Acinetobacter tandoii DSM 14970 = CIP 107469 321 Acinetobacter Acinetobacter pittii PHEA-2 306 Acinetobacter Acinetobacter schindleri CIP 107287 293 Acinetobacter Acinetobacter rudis 198 Acinetobacter Acinetobacter bohemicus 193 Acinetobacter Acinetobacter towneri 160 Acinetobacter Acinetobacter sp. Ver3 9 Acinetobacter NZ_CP015484 # 3135 reads uniquely mapped to Actinobaculum (multi-hits among diff. species in Actinobaculum allowed) 2116 Actinobaculum Actinobaculum massiliense ACS-171-V-Col2 681 Actinobaculum Actinobaculum suis 338 Actinobaculum Actinobaculum sp. oral taxon 183 str. F0552 # 2845 reads uniquely mapped to Actinomyces (multi-hits among diff. species in Actinomyces allowed) 362 Actinomyces Actinomyces timonensis DSM 23838 347 Actinomyces Actinomyces sp. VUL4_3 296 Actinomyces Actinomyces radicidentis 275 Actinomyces Actinomyces vaccimaxillae DSM 15804 168 Actinomyces Actinomyces sp. oral taxon 848 str. F0332 141 Actinomyces Actinomyces oris 130 Actinomyces Actinomyces coleocanis DSM 15436 127 Actinomyces Actinomyces suimastitidis DSM 15538 123 Actinomyces Actinomyces graevenitzii C83 100 Actinomyces Actinomyces sp. oral taxon 414 93 Actinomyces Actinomyces europaeus ACS-120-V-Col10b 90 Actinomyces Actinomyces odontolyticus ATCC 17982 78 Actinomyces Actinomyces polynesiensis 66 Actinomyces Actinomyces sp. Marseille-P2985 59 Actinomyces Actinomyces gerencseriae DSM 6844 57 Actinomyces Actinomyces massiliensis 4401292 52 Actinomyces Actinomyces turicensis ACS-279-V-Col4 47 Actinomyces Actinomyces dentalis DSM 19115 45 Actinomyces Actinomyces hongkongensis 38 Actinomyces Actinomyces johnsonii F0542 37 Actinomyces Actinomyces meyeri 32 Actinomyces Actinomyces urogenitalis DSM 15434 29 Actinomyces Actinomyces sp. oral taxon 448 str. F0400 15 Actinomyces Actinomyces slackii ATCC 49928 15 Actinomyces Actinomyces cardiffensis F0333 13 Actinomyces Actinomyces israelii DSM 43320 10 Actinomyces Actinomyces neuii subsp. neuii DSM 8576 # 21606 reads uniquely mapped to Aerococcus (multi-hits among diff. species in Aerococcus allowed) 7298 Aerococcus Aerococcus urinaehominis 7065 Aerococcus Aerococcus urinaeequi 3207 Aerococcus Aerococcus viridans 1914 Aerococcus Aerococcus sanguinicola 1545 Aerococcus Aerococcus christensenii 335 Aerococcus Aerococcus urinae 242 Aerococcus Aerococcus urinae ACS-120-V-Col10a # 2683 reads uniquely mapped to Aeromicrobium (multi-hits among diff. species in Aeromicrobium allowed) 676 Aeromicrobium Aeromicrobium massiliense JC14 629 Aeromicrobium Aeromicrobium erythreum 311 Aeromicrobium Aeromicrobium marinum DSM 15272 299 Aeromicrobium Aeromicrobium sp. Root495 279 Aeromicrobium Aeromicrobium sp. Root472D3 267 Aeromicrobium Aeromicrobium sp. Leaf291 222 Aeromicrobium Aeromicrobium sp. Root236 # 129316 reads uniquely mapped to Aeromonas (multi-hits among diff. species in Aeromonas allowed) 34368 Aeromonas Aeromonas hydrophila 12374 Aeromonas Aeromonas veronii 8794 Aeromonas Aeromonas salmonicida subsp. salmonicida A449 8718 Aeromonas Aeromonas schubertii 6802 Aeromonas Aeromonas hydrophila YL17 6199 Aeromonas Aeromonas aquatica 6040 Aeromonas Aeromonas veronii B565 5941 Aeromonas Aeromonas hydrophila subsp. hydrophila ATCC 7966 5562 Aeromonas Aeromonas hydrophila pc104A 5556 Aeromonas Aeromonas hydrophila ML09-119 5541 Aeromonas Aeromonas hydrophila NJ-35 5529 Aeromonas Aeromonas hydrophila AL09-71 5370 Aeromonas Aeromonas hydrophila J-1 4976 Aeromonas Aeromonas hydrophila 4AK4 4462 Aeromonas Aeromonas media WS 1348 Aeromonas Aeromonas simiae 944 Aeromonas Aeromonas eucrenophila 792 Aeromonas Aeromonas enteropelogenes # 30431 reads uniquely mapped to Afipia (multi-hits among diff. species in Afipia allowed) 12147 Afipia Afipia birgiae 34632 11908 Afipia Afipia sp. Root123D2 1943 Afipia Afipia clevelandensis ATCC 49720 1681 Afipia Afipia sp. P52-10 1445 Afipia Afipia broomeae ATCC 49717 1307 Afipia Afipia felis ATCC 53690 # 102262 reads uniquely mapped to Agarivorans (multi-hits among diff. species in Agarivorans allowed) 68634 Agarivorans Agarivorans gilvus 33628 Agarivorans Agarivorans albus MKT 106 # 85414 reads uniquely mapped to Aggregatibacter (multi-hits among diff. species in Aggregatibacter allowed) 35336 Aggregatibacter Aggregatibacter aphrophilus NJ8700 24206 Aggregatibacter Aggregatibacter actinomycetemcomitans 18590 Aggregatibacter Aggregatibacter aphrophilus 2583 Aggregatibacter NZ_CP008984 2504 Aggregatibacter Aggregatibacter actinomycetemcomitans HK1651 2195 Aggregatibacter NC_016513 # 15002 reads uniquely mapped to Agrobacterium (multi-hits among diff. species in Agrobacterium allowed) 5141 Agrobacterium Agrobacterium rhizogenes 3226 Agrobacterium Agrobacterium radiobacter K84 2503 Agrobacterium Agrobacterium sp. RAC06 1462 Agrobacterium Agrobacterium tumefaciens 593 Agrobacterium Agrobacterium vitis S4 581 Agrobacterium Agrobacterium sp. H13-3 518 Agrobacterium Agrobacterium fabrum str. C58 469 Agrobacterium Rhizobium rhizogenes NBRC 13257 221 Agrobacterium Agrobacterium albertimagni AOL15 178 Agrobacterium Rhizobium larrymoorei ATCC 51759 66 Agrobacterium Rhizobium rubi NBRC 13261 44 Agrobacterium Agrobacterium arsenijevicii # 42256 reads uniquely mapped to Akkermansia (multi-hits among diff. species in Akkermansia allowed) 19922 Akkermansia NZ_CP015409 19869 Akkermansia Akkermansia muciniphila ATCC BAA-835 2465 Akkermansia Akkermansia glycaniphila # 44572 reads uniquely mapped to Algiphilus (multi-hits among diff. species in Algiphilus allowed) 44572 Algiphilus Algiphilus aromaticivorans DG1253 # 82266 reads uniquely mapped to Aliiglaciecola (multi-hits among diff. species in Aliiglaciecola allowed) 82266 Aliiglaciecola Aliiglaciecola lipolytica E3 # 32450 reads uniquely mapped to Aliihoeflea (multi-hits among diff. species in Aliihoeflea allowed) 32450 Aliihoeflea Aliihoeflea sp. 2WW # 130908 reads uniquely mapped to Aliivibrio (multi-hits among diff. species in Aliivibrio allowed) 68704 Aliivibrio Vibrio fischeri ES114 44582 Aliivibrio Aliivibrio salmonicida LFI1238 17622 Aliivibrio Aliivibrio wodanis # 107115 reads uniquely mapped to Alishewanella (multi-hits among diff. species in Alishewanella allowed) 107115 Alishewanella Alishewanella agri BL06 # 17577 reads uniquely mapped to Alistipes (multi-hits among diff. species in Alistipes allowed) 6176 Alistipes Alistipes finegoldii DSM 17242 5841 Alistipes Alistipes ihumii AP11 1176 Alistipes Alistipes timonensis JC136 1166 Alistipes Alistipes senegalensis JC50 1139 Alistipes Alistipes shahii WAL 8301 807 Alistipes Alistipes inops 645 Alistipes Alistipes indistinctus YIT 12060 608 Alistipes Alistipes obesi 19 Alistipes Alistipes putredinis DSM 17216 # 2402 reads uniquely mapped to Aliterella (multi-hits among diff. species in Aliterella allowed) 2402 Aliterella Aliterella atlantica CENA595 # 69195 reads uniquely mapped to Alkanindiges (multi-hits among diff. species in Alkanindiges allowed) 69195 Alkanindiges Alkanindiges illinoisensis DSM 15370 # 1580 reads uniquely mapped to Alloprevotella (multi-hits among diff. species in Alloprevotella allowed) 1126 Alloprevotella Alloprevotella tannerae ATCC 51259 454 Alloprevotella Alloprevotella rava F0323 # 13125 reads uniquely mapped to Altererythrobacter (multi-hits among diff. species in Altererythrobacter allowed) 4640 Altererythrobacter Altererythrobacter ishigakiensis 2892 Altererythrobacter Altererythrobacter atlanticus 2485 Altererythrobacter Altererythrobacter namhicola 1987 Altererythrobacter Altererythrobacter epoxidivorans 427 Altererythrobacter Altererythrobacter marensis 252 Altererythrobacter Altererythrobacter dongtanensis 224 Altererythrobacter Altererythrobacter sp. Root672 218 Altererythrobacter Altererythrobacter troitsensis # 98852 reads uniquely mapped to Alteromonas (multi-hits among diff. species in Alteromonas allowed) 27985 Alteromonas Alteromonas australica 13747 Alteromonas Alteromonas mediterranea 6893 Alteromonas Alteromonas stellipolaris 4796 Alteromonas Alteromonas macleodii 3594 Alteromonas Alteromonas mediterranea DE 3566 Alteromonas Alteromonas mediterranea UM7 3456 Alteromonas Alteromonas sp. LOR 3405 Alteromonas Alteromonas mediterranea UM4b 2943 Alteromonas Alteromonas mediterranea U8 2721 Alteromonas Alteromonas mediterranea DE1 2718 Alteromonas Alteromonas stellipolaris LMG 21856 2592 Alteromonas Alteromonas naphthalenivorans 2512 Alteromonas Alteromonas sp. RW2A1 2459 Alteromonas Alteromonas macleodii ATCC 27126 2436 Alteromonas Alteromonas mediterranea MED64 2387 Alteromonas Alteromonas addita 2345 Alteromonas Alteromonas macleodii str. 'English Channel 673' 2282 Alteromonas Alteromonas macleodii str. 'Black Sea 11' 2266 Alteromonas Alteromonas macleodii str. 'Balearic Sea AD45' 2134 Alteromonas Alteromonas mediterranea U7 1615 Alteromonas Alteromonas sp. Mac1 # 14441 reads uniquely mapped to Aminobacter (multi-hits among diff. species in Aminobacter allowed) 10474 Aminobacter Aminobacter sp. J41 2027 Aminobacter Aminobacter aminovorans 1940 Aminobacter Aminobacter sp. Root100 # 5485 reads uniquely mapped to Aminobacterium (multi-hits among diff. species in Aminobacterium allowed) 3358 Aminobacterium Aminobacterium mobile DSM 12262 2127 Aminobacterium Aminobacterium colombiense DSM 12261 # 4027 reads uniquely mapped to Anabaena (multi-hits among diff. species in Anabaena allowed) 1778 Anabaena Anabaena cylindrica PCC 7122 833 Anabaena Anabaena sp. 90 709 Anabaena Anabaena sp. WA102 707 Anabaena Anabaena sp. PCC 7108 # 8728 reads uniquely mapped to Anaerococcus (multi-hits among diff. species in Anaerococcus allowed) 3055 Anaerococcus Anaerococcus lactolyticus ATCC 51172 1814 Anaerococcus Anaerococcus provenciensis 1641 Anaerococcus Anaerococcus mediterraneensis 851 Anaerococcus Anaerococcus tetradius ATCC 35098 695 Anaerococcus Anaerococcus prevotii ACS-065-V-Col13 276 Anaerococcus Anaerococcus prevotii DSM 20548 271 Anaerococcus Anaerococcus hydrogenalis DSM 7454 76 Anaerococcus Anaerococcus obesiensis ph10 49 Anaerococcus Anaerococcus pacaensis 9403502 # 1996 reads uniquely mapped to Anaerophaga (multi-hits among diff. species in Anaerophaga allowed) 1996 Anaerophaga Anaerophaga thermohalophila DSM 12881 # 7458 reads uniquely mapped to Anaplasma (multi-hits among diff. species in Anaplasma allowed) 2421 Anaplasma Anaplasma marginale str. Florida 2362 Anaplasma Anaplasma marginale str. St. Maries 2168 Anaplasma Anaplasma centrale str. Israel 141 Anaplasma Anaplasma phagocytophilum str. HZ 126 Anaplasma Anaplasma phagocytophilum str. Norway variant2 124 Anaplasma Anaplasma phagocytophilum str. JM 116 Anaplasma Anaplasma phagocytophilum str. HZ2 # 17106 reads uniquely mapped to Aneurinibacillus (multi-hits among diff. species in Aneurinibacillus allowed) 8362 Aneurinibacillus Aneurinibacillus migulanus 8087 Aneurinibacillus Aneurinibacillus sp. XH2 657 Aneurinibacillus Aneurinibacillus tyrosinisolvens # 24219 reads uniquely mapped to Anoxybacillus (multi-hits among diff. species in Anoxybacillus allowed) 8580 Anoxybacillus Anoxybacillus sp. B2M1 6312 Anoxybacillus Anoxybacillus amylolyticus 3147 Anoxybacillus Anoxybacillus sp. B7M1 3068 Anoxybacillus Anoxybacillus gonensis 3014 Anoxybacillus Anoxybacillus flavithermus WK1 98 Anoxybacillus Anoxybacillus tepidamans PS2 # 44231 reads uniquely mapped to Aquabacterium (multi-hits among diff. species in Aquabacterium allowed) 22430 Aquabacterium Aquabacterium parvum 21801 Aquabacterium Aquabacterium sp. NJ1 # 43405 reads uniquely mapped to Aquincola (multi-hits among diff. species in Aquincola allowed) 43405 Aquincola Aquincola tertiaricarbonis # 726 reads uniquely mapped to Ardenticatena (multi-hits among diff. species in Ardenticatena allowed) 726 Ardenticatena Ardenticatena maritima # 155796 reads uniquely mapped to Arsenophonus (multi-hits among diff. species in Arsenophonus allowed) 115275 Arsenophonus Arsenophonus endosymbiont str. Hangzhou of Nilaparvata lugens 33527 Arsenophonus Arsenophonus nasoniae DSM 15247 6994 Arsenophonus Arsenophonus symbiont of Lipoptena fortisetosa # 3911 reads uniquely mapped to Arthrobacter (multi-hits among diff. species in Arthrobacter allowed) 571 Arthrobacter Arthrobacter alpinus 545 Arthrobacter Arthrobacter sp. L77 414 Arthrobacter Arthrobacter sp. ZXY-2 311 Arthrobacter Arthrobacter sp. YC-RL1 200 Arthrobacter Arthrobacter sp. QXT-31 193 Arthrobacter Arthrobacter sp. Rue61a 167 Arthrobacter Arthrobacter sp. ATCC 21022 138 Arthrobacter Arthrobacter sp. LS16 130 Arthrobacter Arthrobacter sp. IHBB 11108 118 Arthrobacter Arthrobacter sp. U41 115 Arthrobacter Arthrobacter sp. FB24 104 Arthrobacter Arthrobacter sp. H20 99 Arthrobacter Arthrobacter sp. ERGS1:01 95 Arthrobacter Arthrobacter sp. A3 88 Arthrobacter Arthrobacter sp. Soil782 86 Arthrobacter Arthrobacter sp. Br18 81 Arthrobacter Arthrobacter sp. PAMC 25486 72 Arthrobacter Arthrobacter crystallopoietes BAB-32 70 Arthrobacter Arthrobacter sp. Hiyo1 58 Arthrobacter Arthrobacter sp. H14 47 Arthrobacter Arthrobacter sp. 35W 47 Arthrobacter Arthrobacter sp. Soil763 38 Arthrobacter Arthrobacter sp. H5 37 Arthrobacter Arthrobacter castelli DSM 16402 36 Arthrobacter Arthrobacter sp. Leaf141 29 Arthrobacter Arthrobacter sp. Edens01 22 Arthrobacter Arthrobacter globiformis NBRC 12137 # 6591 reads uniquely mapped to Arthrospira (multi-hits among diff. species in Arthrospira allowed) 6591 Arthrospira Arthrospira platensis NIES-39 # 130014 reads uniquely mapped to Asticcacaulis (multi-hits among diff. species in Asticcacaulis allowed) 68962 Asticcacaulis Asticcacaulis sp. AC466 57857 Asticcacaulis Asticcacaulis sp. YBE204 2527 Asticcacaulis Asticcacaulis excentricus CB 48 337 Asticcacaulis Asticcacaulis biprosthecum C19 331 Asticcacaulis Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 # 70307 reads uniquely mapped to Avibacterium (multi-hits among diff. species in Avibacterium allowed) 70307 Avibacterium Avibacterium paragallinarum JF4211 # 14916 reads uniquely mapped to Azorhizobium (multi-hits among diff. species in Azorhizobium allowed) 10644 Azorhizobium Azorhizobium caulinodans ORS 571 4272 Azorhizobium Azorhizobium doebereinerae UFLA1-100 # 35234 reads uniquely mapped to Azospirillum (multi-hits among diff. species in Azospirillum allowed) 18991 Azospirillum Azospirillum halopraeferens DSM 3675 4418 Azospirillum Azospirillum lipoferum 4B 4137 Azospirillum Azospirillum brasilense 3775 Azospirillum Azospirillum sp. B510 2423 Azospirillum Azospirillum thiophilum 1490 Azospirillum Azospirillum humicireducens # 72336 reads uniquely mapped to Bacillus (multi-hits among diff. species in Bacillus allowed) 57009 Bacillus Bacillus anthracis 5840 Bacillus Bacillus sp. FJAT-22090 2081 Bacillus Bacillus sp. FJAT-25496 1799 Bacillus Bacillus cellulosilyticus DSM 2522 1008 Bacillus Bacillus humi 281 Bacillus Bacillus cecembensis 245 Bacillus Bacillus thuringiensis 242 Bacillus Bacillus sp. FJAT-18019 198 Bacillus Bacillus sp. FJAT-18017 191 Bacillus Bacillus cereus 129 Bacillus Bacillus pumilus 126 Bacillus Bacillus coagulans 123 Bacillus Bacillus sp. X1(2014) 120 Bacillus Bacillus bogoriensis ATCC BAA-922 106 Bacillus Bacillus sp. FJAT-27916 85 Bacillus Bacillus ndiopicus 83 Bacillus Bacillus beveridgei 81 Bacillus Bacillus mycoides 79 Bacillus Bacillus rubiinfantis 70 Bacillus Bacillus velezensis 69 Bacillus Bacillus amyloliquefaciens 67 Bacillus Bacillus subtilis 67 Bacillus Bacillus andreraoultii 57 Bacillus Bacillus smithii 56 Bacillus Bacillus sp. OxB-1 54 Bacillus Bacillus sp. FJAT-26652 53 Bacillus Bacillus clausii 51 Bacillus Bacillus campisalis 51 Bacillus Bacillus licheniformis 49 Bacillus Bacillus cereus E33L 46 Bacillus Bacillus azotoformans LMG 9581 46 Bacillus Bacillus testis 45 Bacillus Bacillus coagulans 36D1 40 Bacillus Bacillus cereus FRI-35 39 Bacillus Bacillus sp. B-jedd 39 Bacillus Bacillus velezensis YAU B9601-Y2 35 Bacillus Bacillus endophyticus 34 Bacillus Bacillus infantis NRRL B-14911 34 Bacillus Bacillus solani 33 Bacillus Bacillus coagulans DSM 1 = ATCC 7050 32 Bacillus Bacillus bataviensis LMG 21833 32 Bacillus Bacillus velezensis NAU-B3 30 Bacillus Bacillus methanolicus MGA3 30 Bacillus Bacillus subtilis subsp. subtilis 29 Bacillus Bacillus cereus D17 28 Bacillus Bacillus cereus G9241 28 Bacillus Bacillus shackletonii 27 Bacillus Bacillus thuringiensis serovar tolworthi 27 Bacillus Bacillus weihaiensis 26 Bacillus Bacillus sp. FDAARGOS_235 25 Bacillus Bacillus thuringiensis HD-771 25 Bacillus Bacillus oceanisediminis 2691 23 Bacillus Bacillus thuringiensis str. Al Hakam 23 Bacillus Bacillus cereus ATCC 4342 22 Bacillus Bacillus anthracis str. Sterne 22 Bacillus Bacillus flexus 21 Bacillus Bacillus coahuilensis m4-4 21 Bacillus Bacillus mannanilyticus JCM 10596 21 Bacillus Bacillus sp. 1NLA3E 21 Bacillus Bacillus coagulans 2-6 21 Bacillus Bacillus anthracis str. V770-NP-1R 21 Bacillus Bacillus subtilis subsp. globigii 20 Bacillus Bacillus muralis 20 Bacillus Bacillus lehensis G1 19 Bacillus Bacillus sp. FJAT-14266 18 Bacillus Bacillus megaterium WSH-002 17 Bacillus Bacillus manliponensis 17 Bacillus Bacillus sp. FJAT-14578 17 Bacillus Bacillus sp. ABP14 16 Bacillus Bacillus sp. SDLI1 16 Bacillus Bacillus thuringiensis serovar kurstaki str. YBT-1520 16 Bacillus Bacillus amyloliquefaciens IT-45 15 Bacillus Bacillus halodurans C-125 14 Bacillus Bacillus cereus F837/76 14 Bacillus Bacillus weihenstephanensis KBAB4 14 Bacillus Bacillus okuhidensis 14 Bacillus Bacillus sp. Pc3 14 Bacillus Bacillus clausii KSM-K16 14 Bacillus NZ_CP014858 13 Bacillus Bacillus safensis 13 Bacillus Bacillus sp. 275 13 Bacillus Bacillus subtilis subsp. subtilis str. BSP1 12 Bacillus Bacillus badius NBRC 15713 12 Bacillus Bacillus weihenstephanensis 12 Bacillus Bacillus simplex 10 Bacillus Bacillus vietnamensis NBRC 101237 10 Bacillus Bacillus aurantiacus DSM 18675 10 Bacillus Bacillus xiamenensis 9 Bacillus Bacillus luciferensis 9 Bacillus Bacillus thuringiensis HD1002 9 Bacillus Bacillus cereus 03BB102 9 Bacillus Bacillus massiliogorillae 9 Bacillus Bacillus megaterium DSM 319 9 Bacillus Bacillus gobiensis 9 Bacillus Bacillus cytotoxicus NVH 391-98 9 Bacillus Bacillus timonensis 8 Bacillus Bacillus subtilis subsp. subtilis str. 168 8 Bacillus Bacillus indicus 8 Bacillus Bacillus megaterium MSP20.1 8 Bacillus Bacillus licheniformis DSM 13 = ATCC 14580 8 Bacillus Bacillus massiliosenegalensis JC6 7 Bacillus Bacillus amyloliquefaciens DSM 7 7 Bacillus Bacillus ligniniphilus 7 Bacillus Bacillus thuringiensis HD-789 7 Bacillus Bacillus vireti LMG 21834 7 Bacillus Bacillus megaterium QM B1551 7 Bacillus Bacillus jeddahensis 7 Bacillus Bacillus megaterium Q3 7 Bacillus Bacillus psychrosaccharolyticus ATCC 23296 7 Bacillus Bacillus massilioanorexius AP8 7 Bacillus Bacillus velezensis NJN-6 7 Bacillus Bacillus alcalophilus ATCC 27647 = CGMCC 1.3604 6 Bacillus Bacillus megaterium 6 Bacillus Bacillus amyloliquefaciens UMAF6639 6 Bacillus Bacillus cereus ATCC 10987 6 Bacillus Bacillus subtilis BSn5 6 Bacillus Bacillus pseudofirmus OF4 6 Bacillus Bacillus thuringiensis serovar galleriae 6 Bacillus NZ_CP015350 6 Bacillus Bacillus thuringiensis BMB171 6 Bacillus Bacillus thuringiensis serovar finitimus YBT-020 6 Bacillus Bacillus paralicheniformis 6 Bacillus Bacillus niacini 6 Bacillus Bacillus amyloliquefaciens LFB112 5 Bacillus Bacillus sp. IHB B 7164 5 Bacillus Bacillus farraginis 5 Bacillus Bacillus amyloliquefaciens TA208 5 Bacillus Bacillus anthracis str. A16 5 Bacillus Bacillus thuringiensis serovar thuringiensis str. IS5056 5 Bacillus Bacillus subtilis subsp. spizizenii str. W23 5 Bacillus Bacillus thuringiensis serovar kurstaki str. HD-1 5 Bacillus Bacillus megaterium NBRC 15308 = ATCC 14581 5 Bacillus Bacillus anthracis str. Vollum 5 Bacillus Bacillus sp. H15-1 5 Bacillus NZ_BAXP01000039 5 Bacillus Bacillus akibai JCM 9157 5 Bacillus Bacillus anthracis str. SVA11 5 Bacillus Bacillus thuringiensis serovar indiana 5 Bacillus Bacillus anthracis str. Turkey32 5 Bacillus Bacillus hemicellulosilyticus JCM 9152 5 Bacillus Bacillus wakoensis JCM 9140 5 Bacillus Bacillus cereus 03BB108 5 Bacillus Bacillus anthracis str. Ames 4 Bacillus Bacillus toyonensis BCT-7112 4 Bacillus NZ_BAXP01000042 4 Bacillus Bacillus glycinifermentans 4 Bacillus Bacillus sp. BH072 4 Bacillus Bacillus velezensis AS43.3 4 Bacillus Bacillus horikoshii DSM 8719 4 Bacillus Bacillus anthracis str. H9401 4 Bacillus Bacillus subtilis subsp. subtilis str. RO-NN-1 4 Bacillus Bacillus subtilis subsp. subtilis str. JH642 substr. AG174 4 Bacillus Bacillus thuringiensis MC28 4 Bacillus Bacillus flexus NBRC 15715 4 Bacillus Bacillus velezensis UCMB5033 4 Bacillus Bacillus cereus NC7401 4 Bacillus Bacillus cereus G9842 4 Bacillus Bacillus cereus ATCC 14579 4 Bacillus Bacillus oryziterrae 3 Bacillus Bacillus thuringiensis YBT-1518 3 Bacillus Bacillus anthracis str. CDC 684 3 Bacillus Bacillus cereus biovar anthracis str. CI 3 Bacillus Bacillus atrophaeus 1942 3 Bacillus Bacillus thuringiensis serovar chinensis CT-43 3 Bacillus [Bacillus thuringiensis] serovar konkukian str. 97-27 3 Bacillus Bacillus subtilis subsp. subtilis str. OH 131.1 3 Bacillus Bacillus amyloliquefaciens CC178 3 Bacillus Bacillus subtilis QB928 3 Bacillus Bacillus sp. WP8 3 Bacillus Bacillus thuringiensis serovar morrisoni 3 Bacillus Bacillus shacheensis 3 Bacillus Bacillus thermotolerans 3 Bacillus Bacillus amyloliquefaciens KHG19 3 Bacillus Bacillus cereus Q1 3 Bacillus Bacillus thuringiensis Bt407 3 Bacillus Bacillus cereus B4264 3 Bacillus Bacillus subtilis XF-1 3 Bacillus Bacillus subtilis BEST7003 3 Bacillus Bacillus sp. 3 Bacillus Bacillus velezensis CAU B946 2 Bacillus Bacillus anthracis str. A0248 2 Bacillus Bacillus velezensis UCMB5036 2 Bacillus Bacillus subtilis subsp. natto 2 Bacillus Bacillus amyloliquefaciens LL3 2 Bacillus Bacillus atrophaeus 2 Bacillus Bacillus thuringiensis serovar kurstaki str. HD73 2 Bacillus Bacillus subtilis subsp. subtilis str. BAB-1 2 Bacillus Bacillus subtilis TO-A 2 Bacillus Bacillus velezensis SQR9 2 Bacillus Bacillus subtilis subsp. natto BEST195 2 Bacillus Bacillus subtilis subsp. spizizenii TU-B-10 2 Bacillus Bacillus atrophaeus subsp. globigii 2 Bacillus Bacillus velezensis UCMB5113 2 Bacillus Bacillus cereus AH820 2 Bacillus Bacillus cihuensis 2 Bacillus Bacillus sp. LM 4-2 2 Bacillus Bacillus subtilis subsp. subtilis 6051-HGW 2 Bacillus Bacillus amyloliquefaciens XH7 2 Bacillus Bacillus subtilis KCTC 1028 2 Bacillus Bacillus bombysepticus str. Wang 2 Bacillus Bacillus subtilis PY79 1 Bacillus Bacillus subtilis HJ5 1 Bacillus Bacillus sp. YP1 1 Bacillus Bacillus velezensis TrigoCor1448 1 Bacillus Bacillus trypoxylicola 1 Bacillus Bacillus subtilis subsp. inaquosorum 1 Bacillus Bacillus pumilus SAFR-032 1 Bacillus Bacillus sp. LL01 1 Bacillus Bacillus sp. SB49 1 Bacillus Bacillus thuringiensis serovar alesti 1 Bacillus Bacillus subtilis subsp. subtilis str. AG1839 1 Bacillus Bacillus amyloliquefaciens Y2 1 Bacillus Bacillus paralicheniformis ATCC 9945a 1 Bacillus Bacillus anthracis str. 'Ames Ancestor' 1 Bacillus Bacillus sp. JS 1 Bacillus Bacillus velezensis FZB42 # 8346 reads uniquely mapped to Bacteriovorax (multi-hits among diff. species in Bacteriovorax allowed) 5889 Bacteriovorax Bacteriovorax sp. Seq25_V 2457 Bacteriovorax Bacteriovorax sp. BAL6_X # 6659 reads uniquely mapped to Bacteroides (multi-hits among diff. species in Bacteroides allowed) 4751 Bacteroides Bacteroides coprophilus DSM 18228 = JCM 13818 447 Bacteroides Bacteroides pyogenes JCM 10003 436 Bacteroides Bacteroides salanitronis DSM 18170 237 Bacteroides Bacteroides coprosuis DSM 18011 81 Bacteroides Bacteroides vulgatus ATCC 8482 79 Bacteroides Bacteroides helcogenes P 36-108 70 Bacteroides Bacteroides oleiciplenus YIT 12058 70 Bacteroides Bacteroides dorei CL03T12C01 63 Bacteroides Bacteroides thetaiotaomicron 40 Bacteroides Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 36 Bacteroides Bacteroides plebeius DSM 17135 32 Bacteroides NZ_CP015401 32 Bacteroides Bacteroides coprocola DSM 17136 31 Bacteroides Bacteroides faecichinchillae JCM 17102 31 Bacteroides Bacteroides cellulosilyticus 30 Bacteroides Bacteroides fragilis 28 Bacteroides Bacteroides uniformis ATCC 8492 28 Bacteroides Bacteroides neonati 23 Bacteroides Bacteroides thetaiotaomicron VPI-5482 20 Bacteroides Bacteroides fluxus YIT 12057 19 Bacteroides Bacteroides ovatus 17 Bacteroides Bacteroides ovatus V975 15 Bacteroides Bacteroides fragilis YCH46 14 Bacteroides Bacteroides stercoris ATCC 43183 10 Bacteroides Bacteroides fragilis 638R 10 Bacteroides Bacteroides fragilis NCTC 9343 5 Bacteroides Bacteroides paurosaccharolyticus JCM 15092 4 Bacteroides Bacteroides reticulotermitis JCM 10512 # 109099 reads uniquely mapped to Balneatrix (multi-hits among diff. species in Balneatrix allowed) 109099 Balneatrix Balneatrix alpica DSM 16621 # 13334 reads uniquely mapped to Bavariicoccus (multi-hits among diff. species in Bavariicoccus allowed) 13334 Bavariicoccus Bavariicoccus seileri DSM 19936 # 41894 reads uniquely mapped to Beggiatoa (multi-hits among diff. species in Beggiatoa allowed) 28620 Beggiatoa Beggiatoa leptomitiformis 13274 Beggiatoa Beggiatoa alba B18LD # 1403 reads uniquely mapped to Belnapia (multi-hits among diff. species in Belnapia allowed) 1403 Belnapia Belnapia moabensis DSM 16746 # 64336 reads uniquely mapped to Bermanella (multi-hits among diff. species in Bermanella allowed) 64336 Bermanella Bermanella marisrubri # 17881 reads uniquely mapped to Bifidobacterium (multi-hits among diff. species in Bifidobacterium allowed) 12348 Bifidobacterium Bifidobacterium longum subsp. longum 3600 Bifidobacterium Bifidobacterium gallicum DSM 20093 = LMG 11596 213 Bifidobacterium Bifidobacterium subtile 163 Bifidobacterium Bifidobacterium minimum 130 Bifidobacterium Bifidobacterium aesculapii 122 Bifidobacterium Bifidobacterium mongoliense DSM 21395 113 Bifidobacterium Bifidobacterium cuniculi 93 Bifidobacterium Bifidobacterium bombi DSM 19703 83 Bifidobacterium Bifidobacterium stellenboschense 74 Bifidobacterium Bifidobacterium angulatum 70 Bifidobacterium Bifidobacterium angulatum DSM 20098 = JCM 7096 66 Bifidobacterium Bifidobacterium adolescentis 51 Bifidobacterium Bifidobacterium longum NCC2705 50 Bifidobacterium Bifidobacterium breve 46 Bifidobacterium Bifidobacterium actinocoloniiforme DSM 22766 43 Bifidobacterium Bifidobacterium longum DJO10A 42 Bifidobacterium Bifidobacterium longum subsp. longum BBMN68 41 Bifidobacterium Bifidobacterium scardovii JCM 12489 = DSM 13734 37 Bifidobacterium Bifidobacterium animalis subsp. lactis AD011 36 Bifidobacterium Bifidobacterium biavatii DSM 23969 33 Bifidobacterium Bifidobacterium longum subsp. longum KACC 91563 30 Bifidobacterium Bifidobacterium callitrichos DSM 23973 30 Bifidobacterium Bifidobacterium asteroides PRL2011 27 Bifidobacterium Bifidobacterium indicum LMG 11587 = DSM 20214 24 Bifidobacterium Bifidobacterium saguini DSM 23967 23 Bifidobacterium Bifidobacterium magnum 22 Bifidobacterium Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 21 Bifidobacterium Bifidobacterium coryneforme 21 Bifidobacterium Bifidobacterium breve ACS-071-V-Sch8b 18 Bifidobacterium Bifidobacterium psychraerophilum 16 Bifidobacterium Bifidobacterium longum 16 Bifidobacterium Bifidobacterium tsurumiense 14 Bifidobacterium Bifidobacterium longum subsp. infantis 13 Bifidobacterium Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 12 Bifidobacterium Bifidobacterium crudilactis 9 Bifidobacterium Bifidobacterium bifidum S17 9 Bifidobacterium Bifidobacterium dentium JCM 1195 = DSM 20436 8 Bifidobacterium Bifidobacterium thermophilum RBL67 7 Bifidobacterium Bifidobacterium bifidum PRL2010 7 Bifidobacterium Bifidobacterium dentium Bd1 7 Bifidobacterium Bifidobacterium adolescentis ATCC 15703 7 Bifidobacterium Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 5 Bifidobacterium Bifidobacterium breve S27 5 Bifidobacterium Bifidobacterium kashiwanohense PV20-2 5 Bifidobacterium Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 5 Bifidobacterium Bifidobacterium breve 12L 4 Bifidobacterium Bifidobacterium longum subsp. infantis 157F 4 Bifidobacterium Bifidobacterium longum subsp. longum JCM 1217 4 Bifidobacterium Bifidobacterium animalis subsp. lactis B420 3 Bifidobacterium Bifidobacterium animalis subsp. lactis DSM 10140 3 Bifidobacterium Bifidobacterium gallinarum 3 Bifidobacterium Bifidobacterium animalis subsp. lactis CNCM I-2494 3 Bifidobacterium Bifidobacterium bifidum BGN4 3 Bifidobacterium Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 3 Bifidobacterium Bifidobacterium breve UCC2003 3 Bifidobacterium Bifidobacterium bifidum 3 Bifidobacterium Bifidobacterium animalis subsp. lactis Bl12 3 Bifidobacterium Bifidobacterium animalis subsp. lactis BLC1 2 Bifidobacterium Bifidobacterium longum subsp. longum GT15 2 Bifidobacterium Bifidobacterium animalis 2 Bifidobacterium Bifidobacterium breve NCFB 2258 2 Bifidobacterium Bifidobacterium bohemicum DSM 22767 2 Bifidobacterium Bifidobacterium animalis subsp. lactis Bi-07 2 Bifidobacterium Bifidobacterium longum subsp. longum JDM301 2 Bifidobacterium Bifidobacterium animalis subsp. lactis 2 Bifidobacterium Bifidobacterium pseudolongum PV8-2 2 Bifidobacterium Bifidobacterium animalis subsp. lactis Bl-04 2 Bifidobacterium Bifidobacterium animalis subsp. lactis BB-12 1 Bifidobacterium Bifidobacterium animalis subsp. lactis V9 1 Bifidobacterium Bifidobacterium animalis subsp. animalis ATCC 25527 1 Bifidobacterium Bifidobacterium breve DSM 20213 = JCM 1192 1 Bifidobacterium Bifidobacterium animalis subsp. lactis ATCC 27673 1 Bifidobacterium Bifidobacterium breve JCM 7017 1 Bifidobacterium Bifidobacterium breve JCM 7019 1 Bifidobacterium Bifidobacterium reuteri DSM 23975 # 11568 reads uniquely mapped to Blastomonas (multi-hits among diff. species in Blastomonas allowed) 8673 Blastomonas Blastomonas sp. RAC04 2895 Blastomonas Blastomonas sp. AAP53 # 1044 reads uniquely mapped to Blattabacterium (multi-hits among diff. species in Blattabacterium allowed) 226 Blattabacterium Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu 201 Blattabacterium Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR 196 Blattabacterium Blattabacterium sp. (Blaberus giganteus) 96 Blattabacterium Blattabacterium sp. (Blatta orientalis) str. Tarazona 87 Blattabacterium Blattabacterium sp. (Nauphoeta cinerea) 84 Blattabacterium Blattabacterium sp. (Blattella germanica) str. Bge 80 Blattabacterium Blattabacterium sp. (Periplaneta americana) str. BPLAN 74 Blattabacterium Blattabacterium cuenoti BPAA # 13418 reads uniquely mapped to Bosea (multi-hits among diff. species in Bosea allowed) 4998 Bosea Bosea sp. 117 2124 Bosea Bosea vaviloviae 1287 Bosea Bosea sp. RAC05 1057 Bosea Bosea sp. UNC402CLCol 978 Bosea Bosea sp. Root483D1 779 Bosea Bosea sp. Leaf344 716 Bosea Bosea thiooxidans 514 Bosea Bosea sp. Root381 485 Bosea Bosea sp. PAMC 26642 480 Bosea Bosea sp. LC85 # 2993 reads uniquely mapped to Brachybacterium (multi-hits among diff. species in Brachybacterium allowed) 1292 Brachybacterium Brachybacterium phenoliresistens 508 Brachybacterium Brachybacterium faecium DSM 4810 346 Brachybacterium Brachybacterium paraconglomeratum LC44 325 Brachybacterium Brachybacterium sp. P6-10-X1 300 Brachybacterium Brachybacterium squillarum M-6-3 222 Brachybacterium Brachybacterium muris UCD-AY4 # 1263 reads uniquely mapped to Brachyspira (multi-hits among diff. species in Brachyspira allowed) 390 Brachyspira Brachyspira alvinipulli ATCC 51933 196 Brachyspira Brachyspira murdochii DSM 12563 168 Brachyspira Brachyspira intermedia PWS/A 135 Brachyspira Brachyspira hyodysenteriae ATCC 27164 110 Brachyspira Brachyspira pilosicoli P43/6/78 102 Brachyspira Brachyspira pilosicoli 95/1000 89 Brachyspira Brachyspira pilosicoli B2904 73 Brachyspira Brachyspira hyodysenteriae WA1 # 12772 reads uniquely mapped to Brackiella (multi-hits among diff. species in Brackiella allowed) 12772 Brackiella Brackiella oedipodis DSM 13743 # 30639 reads uniquely mapped to Bradyrhizobium (multi-hits among diff. species in Bradyrhizobium allowed) 3391 Bradyrhizobium Bradyrhizobium elkanii WSM2783 3210 Bradyrhizobium Bradyrhizobium japonicum 3032 Bradyrhizobium Bradyrhizobium sp. ORS 278 2106 Bradyrhizobium Bradyrhizobium oligotrophicum S58 1793 Bradyrhizobium Bradyrhizobium icense 1786 Bradyrhizobium Bradyrhizobium elkanii USDA 76 1752 Bradyrhizobium Bradyrhizobium valentinum 1646 Bradyrhizobium Bradyrhizobium japonicum USDA 6 1339 Bradyrhizobium Bradyrhizobium sp. LTSP857 1301 Bradyrhizobium Bradyrhizobium sp. S23321 1228 Bradyrhizobium Bradyrhizobium sp. 1094 Bradyrhizobium Bradyrhizobium neotropicale 1014 Bradyrhizobium Bradyrhizobium sp. BTAi1 993 Bradyrhizobium Bradyrhizobium sp. Tv2a-2 728 Bradyrhizobium Bradyrhizobium sp. AS23.2 672 Bradyrhizobium Bradyrhizobium lablabi 608 Bradyrhizobium Bradyrhizobium diazoefficiens 587 Bradyrhizobium Bradyrhizobium diazoefficiens USDA 110 578 Bradyrhizobium Bradyrhizobium sp. URHD0069 515 Bradyrhizobium Bradyrhizobium sp. STM 3843 400 Bradyrhizobium Bradyrhizobium sp. LTSP885 303 Bradyrhizobium Bradyrhizobium sp. CCGE-LA001 292 Bradyrhizobium Bradyrhizobium genosp. SA-4 str. CB756 271 Bradyrhizobium Bradyrhizobium sp. ARR65 # 179476 reads uniquely mapped to Brenneria (multi-hits among diff. species in Brenneria allowed) 179476 Brenneria Brenneria goodwinii # 19559 reads uniquely mapped to Brevibacillus (multi-hits among diff. species in Brevibacillus allowed) 8985 Brevibacillus Brevibacillus laterosporus LMG 15441 3903 Brevibacillus Brevibacillus brevis NBRC 100599 3208 Brevibacillus Brevibacillus panacihumi W25 2221 Brevibacillus Brevibacillus choshinensis 564 Brevibacillus Brevibacillus thermoruber 423 405 Brevibacillus Brevibacillus borstelensis AK1 273 Brevibacillus Brevibacillus agri 5-2 # 2522 reads uniquely mapped to Brevibacterium (multi-hits among diff. species in Brevibacterium allowed) 1292 Brevibacterium Brevibacterium mcbrellneri ATCC 49030 589 Brevibacterium Brevibacterium linens 210 Brevibacterium Brevibacterium ravenspurgense 5401308 = CCUG 53855 196 Brevibacterium Brevibacterium senegalense 143 Brevibacterium Brevibacterium album DSM 18261 92 Brevibacterium Brevibacterium casei S18 # 15041 reads uniquely mapped to Brevundimonas (multi-hits among diff. species in Brevundimonas allowed) 2542 Brevundimonas Brevundimonas naejangsanensis 2252 Brevundimonas Brevundimonas diminuta ATCC 11568 2032 Brevundimonas Brevundimonas aveniformis DSM 17977 1959 Brevundimonas Brevundimonas subvibrioides ATCC 15264 1236 Brevundimonas Brevundimonas sp. Leaf363 872 Brevundimonas Brevundimonas sp. DS20 859 Brevundimonas Brevundimonas sp. LM2 810 Brevundimonas Brevundimonas sp. GW460-12-10-14-LB2 638 Brevundimonas Brevundimonas abyssalis TAR-001 505 Brevundimonas Brevundimonas sp. Root1279 463 Brevundimonas Brevundimonas bacteroides DSM 4726 448 Brevundimonas Brevundimonas sp. Root608 425 Brevundimonas Brevundimonas nasdae # 117729 reads uniquely mapped to Buchnera (multi-hits among diff. species in Buchnera allowed) 19863 Buchnera Buchnera aphidicola (Schlechtendalia chinensis) 12884 Buchnera Buchnera aphidicola str. Bp (Baizongia pistaciae) 8839 Buchnera Buchnera aphidicola BCc 5725 Buchnera Buchnera aphidicola (Aphis glycines) 5049 Buchnera Buchnera aphidicola (Diuraphis noxia) 4632 Buchnera Buchnera aphidicola (Cinara confinis) 4439 Buchnera Buchnera aphidicola str. Ua (Uroleucon ambrosiae) 4213 Buchnera Buchnera aphidicola str. F009 (Myzus persicae) 4152 Buchnera Buchnera aphidicola str. G002 (Myzus persicae) 4097 Buchnera Buchnera aphidicola str. W106 (Myzus persicae) 4012 Buchnera Buchnera aphidicola str. USDA (Myzus persicae) 3868 Buchnera Buchnera aphidicola str. APS (Acyrthosiphon pisum) 3779 Buchnera Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) 3740 Buchnera Buchnera aphidicola str. Sg (Schizaphis graminum) 3706 Buchnera Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) 3684 Buchnera Buchnera aphidicola str. 5A (Acyrthosiphon pisum) 3655 Buchnera Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) 3610 Buchnera Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) 3463 Buchnera Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) 3072 Buchnera Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) 2714 Buchnera Buchnera aphidicola (Cinara pseudotaxifoliae) 2153 Buchnera Buchnera aphidicola (Tuberolachnus salignus) 1666 Buchnera Buchnera aphidicola 714 Buchnera Buchnera aphidicola (Cinara tujafilina) # 68166 reads uniquely mapped to Burkholderia (multi-hits among diff. species in Burkholderia allowed) 7082 Burkholderia Burkholderia pseudomallei HBPUB10134a 5930 Burkholderia Burkholderia pseudomallei 5803 Burkholderia Burkholderia cenocepacia 2703 Burkholderia Burkholderia mallei 2624 Burkholderia Burkholderia lata 2054 Burkholderia Burkholderia stabilis 1935 Burkholderia Burkholderia pseudomallei A79A 1845 Burkholderia Burkholderia multivorans 1763 Burkholderia Burkholderia dolosa AU0158 1604 Burkholderia Burkholderia ubonensis 1505 Burkholderia Burkholderia multivorans ATCC 17616 1490 Burkholderia Burkholderia vietnamiensis 1321 Burkholderia Burkholderia cepacia 1281 Burkholderia Candidatus Burkholderia crenata 1178 Burkholderia Burkholderia thailandensis 895 Burkholderia Burkholderia sp. OLGA172 753 Burkholderia Burkholderia sp. RPE67 736 Burkholderia Burkholderia sp. YI23 710 Burkholderia Burkholderia contaminans 707 Burkholderia Burkholderia ambifaria AMMD 686 Burkholderia Burkholderia sp. CCGE1002 628 Burkholderia Burkholderia sp. CCGE1003 592 Burkholderia Burkholderia sp. HB1 582 Burkholderia Burkholderia sp. CCGE1001 481 Burkholderia Burkholderia mallei NCTC 10247 463 Burkholderia Burkholderia pseudomallei K96243 454 Burkholderia Burkholderia pseudomallei 1026b 450 Burkholderia Burkholderia ubonensis MSMB22 388 Burkholderia Burkholderia cenocepacia AU 1054 371 Burkholderia Burkholderia cepacia ATCC 25416 367 Burkholderia Burkholderia seminalis 367 Burkholderia Burkholderia territorii 365 Burkholderia Burkholderia cenocepacia MC0-3 357 Burkholderia Burkholderia cenocepacia H111 356 Burkholderia Burkholderia cenocepacia HI2424 352 Burkholderia Burkholderia pyrrocinia 349 Burkholderia Burkholderia cepacia JBK9 348 Burkholderia Burkholderia cenocepacia J2315 345 Burkholderia Burkholderia diffusa 344 Burkholderia Burkholderia vietnamiensis LMG 10929 343 Burkholderia Burkholderia pseudomallei 576 335 Burkholderia Burkholderia ambifaria MC40-6 334 Burkholderia Burkholderia gladioli BSR3 324 Burkholderia Burkholderia latens 324 Burkholderia Burkholderia sp. KJ006 318 Burkholderia Burkholderia stagnalis 314 Burkholderia Burkholderia pseudomultivorans 306 Burkholderia Burkholderia metallica 305 Burkholderia Burkholderia sp. RPE64 283 Burkholderia Burkholderia sp. Bp7605 281 Burkholderia Burkholderia gladioli 277 Burkholderia Burkholderia multivorans ATCC BAA-247 268 Burkholderia Burkholderia pseudomallei MSHR2543 267 Burkholderia Burkholderia pseudomallei MSHR5855 263 Burkholderia Burkholderia pseudomallei MSHR511 262 Burkholderia Burkholderia pseudomallei TSV 48 260 Burkholderia Burkholderia thailandensis 2002721723 260 Burkholderia Burkholderia pseudomallei MSHR305 259 Burkholderia Burkholderia sp. PAMC 26561 247 Burkholderia Burkholderia pseudomallei MSHR5848 247 Burkholderia Burkholderia pseudomallei K42 247 Burkholderia Burkholderia pseudomallei MSHR5858 246 Burkholderia Burkholderia mallei ATCC 23344 245 Burkholderia Burkholderia pseudomallei 668 244 Burkholderia Burkholderia thailandensis E254 241 Burkholderia Burkholderia pseudomallei HBPUB10303a 241 Burkholderia Burkholderia thailandensis E264 239 Burkholderia Burkholderia oklahomensis 239 Burkholderia Burkholderia thailandensis MSMB121 239 Burkholderia Burkholderia pseudomallei Pasteur 52237 238 Burkholderia Burkholderia oklahomensis C6786 238 Burkholderia Burkholderia thailandensis 34 237 Burkholderia Burkholderia thailandensis E444 236 Burkholderia Burkholderia pseudomallei NCTC 13178 235 Burkholderia Burkholderia mallei NCTC 10229 235 Burkholderia Burkholderia pseudomallei MSHR491 233 Burkholderia Burkholderia pseudomallei NAU35A-3 233 Burkholderia Burkholderia sp. PAMC 28687 232 Burkholderia Burkholderia thailandensis 2002721643 231 Burkholderia Burkholderia pseudomallei BPC006 225 Burkholderia Burkholderia pseudomallei 7894 225 Burkholderia Burkholderia pseudomallei PB08298010 224 Burkholderia Burkholderia pseudomallei 1106a 224 Burkholderia Burkholderia pseudomallei MSHR146 224 Burkholderia Burkholderia pseudomallei 406e 218 Burkholderia Burkholderia thailandensis MSMB59 217 Burkholderia Burkholderia sp. 2002721687 215 Burkholderia Burkholderia pseudomallei NAU20B-16 214 Burkholderia Burkholderia pseudomallei B03 212 Burkholderia Burkholderia pseudomallei MSHR520 211 Burkholderia Burkholderia pseudomallei 1710b 207 Burkholderia Burkholderia thailandensis USAMRU Malaysia #20 206 Burkholderia Burkholderia glumae BGR1 203 Burkholderia Burkholderia sp. Bp5365 200 Burkholderia NZ_CP016636 199 Burkholderia Burkholderia pseudomallei MSHR62 195 Burkholderia Burkholderia glumae LMG 2196 = ATCC 33617 194 Burkholderia NC_022659 191 Burkholderia Burkholderia mallei SAVP1 189 Burkholderia Burkholderia thailandensis H0587 180 Burkholderia Burkholderia pseudomallei MSHR840 167 Burkholderia Burkholderia glumae PG1 150 Burkholderia Burkholderia plantarii 131 Burkholderia Burkholderia cepacia GG4 62 Burkholderia Burkholderia sp. JPY347 58 Burkholderia NC_022658 55 Burkholderia NZ_CP016637 # 192902 reads uniquely mapped to Buttiauxella (multi-hits among diff. species in Buttiauxella allowed) 192902 Buttiauxella Buttiauxella ferragutiae ATCC 51602 # 9969 reads uniquely mapped to Butyricicoccus (multi-hits among diff. species in Butyricicoccus allowed) 6669 Butyricicoccus Butyricicoccus pullicaecorum 1.2 3300 Butyricicoccus Butyricicoccus desmolans ATCC 43058 # 9132 reads uniquely mapped to Caldicellulosiruptor (multi-hits among diff. species in Caldicellulosiruptor allowed) 1661 Caldicellulosiruptor Caldicellulosiruptor sp. Rt8.B8 1257 Caldicellulosiruptor Caldicellulosiruptor lactoaceticus 6A 964 Caldicellulosiruptor Caldicellulosiruptor kristjanssonii I77R1B 934 Caldicellulosiruptor Caldicellulosiruptor obsidiansis OB47 918 Caldicellulosiruptor Caldicellulosiruptor saccharolyticus DSM 8903 889 Caldicellulosiruptor Caldicellulosiruptor owensensis OL 854 Caldicellulosiruptor Caldicellulosiruptor hydrothermalis 108 849 Caldicellulosiruptor Caldicellulosiruptor bescii DSM 6725 806 Caldicellulosiruptor Caldicellulosiruptor kronotskyensis 2002 # 47132 reads uniquely mapped to Caldimonas (multi-hits among diff. species in Caldimonas allowed) 47132 Caldimonas Caldimonas manganoxidans ATCC BAA-369 # 8510 reads uniquely mapped to Calditerrivibrio (multi-hits among diff. species in Calditerrivibrio allowed) 8510 Calditerrivibrio Calditerrivibrio nitroreducens DSM 19672 # 7957 reads uniquely mapped to Calothrix (multi-hits among diff. species in Calothrix allowed) 2401 Calothrix Calothrix sp. PCC 7507 2203 Calothrix Calothrix sp. PCC 6303 2040 Calothrix Calothrix sp. 336/3 1313 Calothrix Calothrix sp. PCC 7103 # 11467 reads uniquely mapped to Campylobacter (multi-hits among diff. species in Campylobacter allowed) 4898 Campylobacter Campylobacter mucosalis 1182 Campylobacter Campylobacter coli 831 Campylobacter Campylobacter jejuni subsp. jejuni PT14 379 Campylobacter Campylobacter hominis ATCC BAA-381 341 Campylobacter Campylobacter curvus 525.92 289 Campylobacter Campylobacter upsaliensis DSM 5365 264 Campylobacter Campylobacter concisus 236 Campylobacter Campylobacter hyointestinalis subsp. lawsonii 225 Campylobacter Campylobacter concisus 13826 215 Campylobacter Campylobacter jejuni 189 Campylobacter Campylobacter showae CSUNSWCD 168 Campylobacter Campylobacter hyointestinalis subsp. hyointestinalis LMG 9260 160 Campylobacter Campylobacter coli RM5611 157 Campylobacter Campylobacter coli CVM N29710 147 Campylobacter Campylobacter coli RM1875 124 Campylobacter Campylobacter jejuni subsp. doylei 269.97 108 Campylobacter Campylobacter volucris LMG 24379 104 Campylobacter Campylobacter gracilis 101 Campylobacter Campylobacter insulaenigrae NCTC 12927 99 Campylobacter Campylobacter lari RM16701 96 Campylobacter Campylobacter subantarcticus LMG 24374 93 Campylobacter Campylobacter lari RM16712 93 Campylobacter Campylobacter sp. MIT 97-5078 91 Campylobacter Campylobacter lari CCUG 22395 87 Campylobacter Campylobacter lari RM2100 86 Campylobacter Campylobacter lari NCTC 11845 84 Campylobacter Campylobacter lari subsp. concheus LMG 11760 84 Campylobacter Campylobacter subantarcticus LMG 24377 84 Campylobacter Campylobacter peloridis LMG 23910 81 Campylobacter Campylobacter sp. RM16704 78 Campylobacter Campylobacter lari 76 Campylobacter NZ_CP011777 66 Campylobacter Campylobacter cuniculorum DSM 23162 = LMG 24588 56 Campylobacter Campylobacter sputorum biovar sputorum 24 Campylobacter Campylobacter ureolyticus RIGS 9880 13 Campylobacter Campylobacter jejuni subsp. jejuni 6 Campylobacter Campylobacter corcagiensis 4 Campylobacter Campylobacter jejuni subsp. jejuni S3 3 Campylobacter Campylobacter jejuni subsp. jejuni str. RM3420 3 Campylobacter Campylobacter pinnipediorum subsp. caledonicus 3 Campylobacter Campylobacter jejuni RM1221 3 Campylobacter Campylobacter fetus subsp. venerealis cfvi03/293 3 Campylobacter Campylobacter jejuni subsp. jejuni F38011 3 Campylobacter Campylobacter jejuni subsp. jejuni 00-2426 2 Campylobacter Campylobacter jejuni subsp. jejuni NCTC 11168-mcK12E5 2 Campylobacter Campylobacter fetus subsp. fetus 82-40 2 Campylobacter Campylobacter jejuni subsp. jejuni CG8421 2 Campylobacter Campylobacter pinnipediorum subsp. pinnipediorum 2 Campylobacter Campylobacter coli 15-537360 2 Campylobacter Campylobacter jejuni 32488 2 Campylobacter Campylobacter fetus subsp. fetus 04/554 2 Campylobacter Campylobacter fetus subsp. venerealis str. 84-112 1 Campylobacter Campylobacter jejuni subsp. jejuni 81-176 1 Campylobacter Campylobacter jejuni subsp. jejuni 00-2538 1 Campylobacter Campylobacter jejuni subsp. jejuni 81116 1 Campylobacter Campylobacter jejuni subsp. jejuni IA3902 1 Campylobacter Campylobacter fetus subsp. venerealis 97/608 1 Campylobacter Campylobacter jejuni subsp. jejuni 00-2544 1 Campylobacter Campylobacter iguaniorum 1 Campylobacter Campylobacter jejuni subsp. jejuni NCTC 11168-Kf1 1 Campylobacter Campylobacter jejuni 4031 1 Campylobacter Campylobacter fetus subsp. testudinum 03-427 1 Campylobacter Campylobacter fetus subsp. testudinum 1 Campylobacter Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 1 Campylobacter Campylobacter jejuni subsp. jejuni M1 1 Campylobacter Campylobacter jejuni subsp. jejuni NCTC 11168-GSv # 2402 reads uniquely mapped to Candidatus_Atelocyanobacterium (multi-hits among diff. species in Candidatus_Atelocyanobacterium allowed) 2402 Candidatus_Atelocyanobacterium Candidatus Atelocyanobacterium thalassa isolate ALOHA # 1387 reads uniquely mapped to Candidatus_Babela (multi-hits among diff. species in Candidatus_Babela allowed) 1387 Candidatus_Babela Candidatus Babela massiliensis # 64481 reads uniquely mapped to Candidatus_Berkiella (multi-hits among diff. species in Candidatus_Berkiella allowed) 64481 Candidatus_Berkiella Candidatus Berkiella cookevillensis # 116493 reads uniquely mapped to Candidatus_Blochmannia (multi-hits among diff. species in Candidatus_Blochmannia allowed) 35530 Candidatus_Blochmannia Candidatus Blochmannia chromaiodes str. 640 33837 Candidatus_Blochmannia Candidatus Blochmannia pennsylvanicus str. BPEN 21873 Candidatus_Blochmannia Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 10419 Candidatus_Blochmannia Candidatus Blochmannia vafer str. BVAF 8075 Candidatus_Blochmannia Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus 6759 Candidatus_Blochmannia Candidatus Blochmannia floridanus # 131586 reads uniquely mapped to Candidatus_Doolittlea (multi-hits among diff. species in Candidatus_Doolittlea allowed) 131586 Candidatus_Doolittlea Candidatus Doolittlea endobia # 11846 reads uniquely mapped to Candidatus_Endolissoclinum (multi-hits among diff. species in Candidatus_Endolissoclinum allowed) 6031 Candidatus_Endolissoclinum Candidatus Endolissoclinum faulkneri L5 5815 Candidatus_Endolissoclinum Candidatus Endolissoclinum faulkneri L2 # 90864 reads uniquely mapped to Candidatus_Hamiltonella (multi-hits among diff. species in Candidatus_Hamiltonella allowed) 90864 Candidatus_Hamiltonella Candidatus Hamiltonella defensa MED (Bemisia tabaci) # 99069 reads uniquely mapped to Candidatus_Hoaglandella (multi-hits among diff. species in Candidatus_Hoaglandella allowed) 99069 Candidatus_Hoaglandella Candidatus Hoaglandella endobia # 68529 reads uniquely mapped to Candidatus_Ishikawaella (multi-hits among diff. species in Candidatus_Ishikawaella allowed) 68529 Candidatus_Ishikawaella Candidatus Ishikawaella capsulata Mpkobe # 11049 reads uniquely mapped to Candidatus_Koribacter (multi-hits among diff. species in Candidatus_Koribacter allowed) 11049 Candidatus_Koribacter Candidatus Koribacter versatilis Ellin345 # 6544 reads uniquely mapped to Candidatus_Magnetobacterium (multi-hits among diff. species in Candidatus_Magnetobacterium allowed) 6544 Candidatus_Magnetobacterium Candidatus Magnetobacterium casensis # 59978 reads uniquely mapped to Candidatus_Methylopumilus (multi-hits among diff. species in Candidatus_Methylopumilus allowed) 45365 Candidatus_Methylopumilus Candidatus Methylopumilus turicensis 14613 Candidatus_Methylopumilus Candidatus Methylopumilus planktonicus # 62793 reads uniquely mapped to Candidatus_Mikella (multi-hits among diff. species in Candidatus_Mikella allowed) 62793 Candidatus_Mikella Candidatus Mikella endobia # 97766 reads uniquely mapped to Candidatus_Moranella (multi-hits among diff. species in Candidatus_Moranella allowed) 48961 Candidatus_Moranella Candidatus Moranella endobia PCIT 48805 Candidatus_Moranella Candidatus Moranella endobia PCVAL # 56991 reads uniquely mapped to Candidatus_Paracaedibacter (multi-hits among diff. species in Candidatus_Paracaedibacter allowed) 50210 Candidatus_Paracaedibacter Candidatus Paracaedibacter symbiosus 6781 Candidatus_Paracaedibacter Candidatus Paracaedibacter acanthamoebae # 11287 reads uniquely mapped to Candidatus_Pelagibacter (multi-hits among diff. species in Candidatus_Pelagibacter allowed) 3292 Candidatus_Pelagibacter Candidatus Pelagibacter sp. IMCC9063 3034 Candidatus_Pelagibacter Candidatus Pelagibacter ubique HTCC1062 2128 Candidatus_Pelagibacter Candidatus Pelagibacter ubique HTCC8051 2003 Candidatus_Pelagibacter Candidatus Pelagibacter sp. HTCC7211 830 Candidatus_Pelagibacter Candidatus Pelagibacter ubique HIMB083 # 70866 reads uniquely mapped to Candidatus_Photodesmus (multi-hits among diff. species in Candidatus_Photodesmus allowed) 43472 Candidatus_Photodesmus Candidatus Photodesmus blepharus 27394 Candidatus_Photodesmus Candidatus Photodesmus katoptron Akat1 # 1218 reads uniquely mapped to Candidatus_Phytoplasma (multi-hits among diff. species in Candidatus_Phytoplasma allowed) 405 Candidatus_Phytoplasma Candidatus Phytoplasma mali 157 Candidatus_Phytoplasma Aster yellows witches'-broom phytoplasma AYWB 137 Candidatus_Phytoplasma Wheat blue dwarf phytoplasma 132 Candidatus_Phytoplasma Peanut witches'-broom phytoplasma NTU2011 91 Candidatus_Phytoplasma Strawberry lethal yellows phytoplasma (CPA) str. NZSb11 80 Candidatus_Phytoplasma Onion yellows phytoplasma OY-M 69 Candidatus_Phytoplasma Maize bushy stunt phytoplasma 62 Candidatus_Phytoplasma Candidatus Phytoplasma australiense 25 Candidatus_Phytoplasma Italian clover phyllody phytoplasma str. MA1 24 Candidatus_Phytoplasma Milkweed yellows phytoplasma str. MW1 23 Candidatus_Phytoplasma Poinsettia branch-inducing phytoplasma str. JR1 13 Candidatus_Phytoplasma Candidatus Phytoplasma phoenicium # 10552 reads uniquely mapped to Candidatus_Puniceispirillum (multi-hits among diff. species in Candidatus_Puniceispirillum allowed) 10552 Candidatus_Puniceispirillum Candidatus Puniceispirillum marinum IMCC1322 # 93541 reads uniquely mapped to Candidatus_Regiella (multi-hits among diff. species in Candidatus_Regiella allowed) 93541 Candidatus_Regiella Candidatus Regiella insecticola LSR1 # 41457 reads uniquely mapped to Candidatus_Riesia (multi-hits among diff. species in Candidatus_Riesia allowed) 30420 Candidatus_Riesia Candidatus Riesia pediculicola USDA 11037 Candidatus_Riesia Candidatus Riesia pediculischaeffi PTSU # 123121 reads uniquely mapped to Candidatus_Schmidhempelia (multi-hits among diff. species in Candidatus_Schmidhempelia allowed) 123121 Candidatus_Schmidhempelia Candidatus Schmidhempelia bombi str. Bimp # 56005 reads uniquely mapped to Candidatus_Tachikawaea (multi-hits among diff. species in Candidatus_Tachikawaea allowed) 56005 Candidatus_Tachikawaea Candidatus Tachikawaea gelatinosa # 72087 reads uniquely mapped to Capnocytophaga (multi-hits among diff. species in Capnocytophaga allowed) 70367 Capnocytophaga Capnocytophaga gingivalis ATCC 33624 1173 Capnocytophaga Capnocytophaga haemolytica 153 Capnocytophaga Capnocytophaga sp. oral taxon 323 151 Capnocytophaga Capnocytophaga ochracea DSM 7271 86 Capnocytophaga Capnocytophaga canimorsus Cc5 49 Capnocytophaga Capnocytophaga sp. oral taxon 338 str. F0234 42 Capnocytophaga Capnocytophaga granulosa ATCC 51502 36 Capnocytophaga Capnocytophaga cynodegmi DSM 19736 29 Capnocytophaga Capnocytophaga canis 1 Capnocytophaga Capnocytophaga sp. oral taxon 329 str. F0087 # 52581 reads uniquely mapped to Cardiobacterium (multi-hits among diff. species in Cardiobacterium allowed) 31053 Cardiobacterium Cardiobacterium hominis ATCC 15826 21528 Cardiobacterium Cardiobacterium valvarum F0432 # 10158 reads uniquely mapped to Catellicoccus (multi-hits among diff. species in Catellicoccus allowed) 10158 Catellicoccus Catellicoccus marimammalium M35/04/3 # 12310 reads uniquely mapped to Caulobacter (multi-hits among diff. species in Caulobacter allowed) 7758 Caulobacter Caulobacter henricii 2496 Caulobacter Caulobacter segnis ATCC 21756 608 Caulobacter Caulobacter sp. K31 593 Caulobacter Caulobacter crescentus NA1000 553 Caulobacter Caulobacter crescentus CB15 302 Caulobacter Caulobacter vibrioides # 226286 reads uniquely mapped to Cedecea (multi-hits among diff. species in Cedecea allowed) 173197 Cedecea Cedecea neteri 53089 Cedecea Dickeya solani # 102095 reads uniquely mapped to Cellvibrio (multi-hits among diff. species in Cellvibrio allowed) 44820 Cellvibrio Cellvibrio sp. PSBB023 28128 Cellvibrio Cellvibrio japonicus Ueda107 17579 Cellvibrio Cellvibrio sp. BR 11568 Cellvibrio Cellvibrio mixtus subsp. mixtus J3-8 # 11854 reads uniquely mapped to Chelatococcus (multi-hits among diff. species in Chelatococcus allowed) 5873 Chelatococcus Chelatococcus sambhunathii 3023 Chelatococcus Chelatococcus sp. CO-6 2958 Chelatococcus Chelatococcus daeguensis # 87830 reads uniquely mapped to Chelonobacter (multi-hits among diff. species in Chelonobacter allowed) 87830 Chelonobacter Chelonobacter oris # 1444 reads uniquely mapped to Chitinophaga (multi-hits among diff. species in Chitinophaga allowed) 1444 Chitinophaga Chitinophaga pinensis DSM 2588 # 1837 reads uniquely mapped to Chlamydia (multi-hits among diff. species in Chlamydia allowed) 268 Chlamydia Chlamydia felis Fe/C-56 250 Chlamydia Chlamydia gallinacea 114 Chlamydia Chlamydia abortus 105 Chlamydia Chlamydia gallinacea 08-1274/3 79 Chlamydia Chlamydia psittaci 6BC 69 Chlamydia Chlamydia ibidis 10-1398/6 57 Chlamydia Chlamydia pecorum W73 56 Chlamydia Chlamydia pecorum P787 50 Chlamydia Chlamydia pecorum PV3056/3 46 Chlamydia Chlamydia psittaci VS225 46 Chlamydia Chlamydia psittaci WS/RT/E30 45 Chlamydia Chlamydophila pneumoniae LPCoLN 44 Chlamydia Chlamydia avium 10DC88 43 Chlamydia Chlamydia psittaci NJ1 43 Chlamydia Chlamydia psittaci 08DC60 42 Chlamydia Chlamydia psittaci 01DC11 41 Chlamydia Chlamydophila pecorum E58 41 Chlamydia Chlamydia psittaci MN 40 Chlamydia NC_018619 40 Chlamydia Chlamydia psittaci CP3 38 Chlamydia Chlamydia psittaci GR9 38 Chlamydia Chlamydia psittaci C19/98 37 Chlamydia Chlamydia abortus S26/3 36 Chlamydia Chlamydia psittaci WC 33 Chlamydia Chlamydia psittaci 02DC15 31 Chlamydia Chlamydia psittaci M56 26 Chlamydia Chlamydophila caviae GPIC 15 Chlamydia Chlamydia trachomatis 4 Chlamydia Chlamydia muridarum 2 Chlamydia Chlamydia trachomatis RC-F/69 2 Chlamydia Chlamydia trachomatis A/7249 2 Chlamydia Chlamydia trachomatis D/CS637/11 2 Chlamydia Chlamydia trachomatis L2b/UCH-2 2 Chlamydia Chlamydophila pneumoniae CWL029 2 Chlamydia Chlamydia trachomatis L2/434/Bu(f) 2 Chlamydia Chlamydia trachomatis 434/Bu 2 Chlamydia Chlamydia trachomatis D-EC 2 Chlamydia Chlamydia trachomatis L2/434/Bu(i) 2 Chlamydia Chlamydia trachomatis D/UW-3/CX 2 Chlamydia Chlamydia trachomatis RC-J/971 2 Chlamydia Chlamydia trachomatis G/9768 2 Chlamydia Chlamydia suis 2 Chlamydia Chlamydia trachomatis RC-J/966 2 Chlamydia Chlamydia trachomatis G/9301 2 Chlamydia Chlamydia trachomatis RC-F(s)/342 2 Chlamydia Chlamydia trachomatis A2497 2 Chlamydia Chlamydia trachomatis E/150 2 Chlamydia Chlamydia trachomatis L2/25667R 2 Chlamydia Chlamydia trachomatis E/11023 1 Chlamydia Chlamydia muridarum str. Nigg 2 MCR 1 Chlamydia Chlamydia trachomatis L1/440/LN 1 Chlamydia Chlamydia trachomatis C/TW-3 1 Chlamydia Chlamydia trachomatis E/Bour 1 Chlamydia Chlamydia trachomatis F/11-96 1 Chlamydia Chlamydia trachomatis D-LC 1 Chlamydia Chlamydia trachomatis B/TZ1A828/OT 1 Chlamydia Chlamydia trachomatis B/Jali20/OT 1 Chlamydia Chlamydia trachomatis F/SW4 1 Chlamydia Chlamydia trachomatis RC-F(s)/852 1 Chlamydia Chlamydia muridarum str. Nigg3 CMUT3-5 1 Chlamydia Chlamydia pneumoniae 1 Chlamydia Chlamydia trachomatis F/SW5 1 Chlamydia Chlamydia muridarum str. Nigg 1 Chlamydia Chlamydia trachomatis A/363 1 Chlamydia Chlamydia trachomatis L1/224 1 Chlamydia Chlamydia trachomatis G/11074 1 Chlamydia Chlamydia trachomatis G/11222 1 Chlamydia Chlamydia trachomatis L2b/8200/07 1 Chlamydia Chlamydia trachomatis RC-J/953 # 4226 reads uniquely mapped to Chlorogloeopsis (multi-hits among diff. species in Chlorogloeopsis allowed) 4226 Chlorogloeopsis Chlorogloeopsis fritschii PCC 6912 # 12185 reads uniquely mapped to Chondromyces (multi-hits among diff. species in Chondromyces allowed) 8576 Chondromyces Chondromyces crocatus 3609 Chondromyces Chondromyces apiculatus DSM 436 # 81388 reads uniquely mapped to Chromohalobacter (multi-hits among diff. species in Chromohalobacter allowed) 53308 Chromohalobacter Chromohalobacter salexigens DSM 3043 28080 Chromohalobacter Chromohalobacter japonicus # 2562 reads uniquely mapped to Chroogloeocystis (multi-hits among diff. species in Chroogloeocystis allowed) 2562 Chroogloeocystis Chroogloeocystis siderophila 5.2 s.c.1 # 19103 reads uniquely mapped to Chryseobacterium (multi-hits among diff. species in Chryseobacterium allowed) 2309 Chryseobacterium Chryseobacterium sp. IHB B 10212 2134 Chryseobacterium Chryseobacterium sp. StRB126 1964 Chryseobacterium Chryseobacterium indologenes 1720 Chryseobacterium Chryseobacterium gallinarum 1593 Chryseobacterium NZ_JASZ01000321 1548 Chryseobacterium Chryseobacterium sp. IHB B 17019 807 Chryseobacterium Chryseobacterium halperniae 630 Chryseobacterium Chryseobacterium koreense CCUG 49689 467 Chryseobacterium Chryseobacterium angstadtii 452 Chryseobacterium Chryseobacterium sp. JAH 421 Chryseobacterium Chryseobacterium piperi 408 Chryseobacterium Chryseobacterium greenlandense 396 Chryseobacterium Chryseobacterium aquaticum 382 Chryseobacterium Chryseobacterium daeguense DSM 19388 372 Chryseobacterium Chryseobacterium solincola 363 Chryseobacterium Chryseobacterium jeonii 349 Chryseobacterium Chryseobacterium vrystaatense 329 Chryseobacterium Chryseobacterium polytrichastri 326 Chryseobacterium Chryseobacterium soli 326 Chryseobacterium Chryseobacterium sp. Leaf404 319 Chryseobacterium Chryseobacterium sp. Leaf180 279 Chryseobacterium Chryseobacterium formosense 269 Chryseobacterium Chryseobacterium gregarium DSM 19109 262 Chryseobacterium Chryseobacterium palustre DSM 21579 261 Chryseobacterium Chryseobacterium caeni DSM 17710 255 Chryseobacterium Chryseobacterium sp. YR460 162 Chryseobacterium Chryseobacterium antarcticum # 2846 reads uniquely mapped to Chthoniobacter (multi-hits among diff. species in Chthoniobacter allowed) 2846 Chthoniobacter Chthoniobacter flavus Ellin428 # 239842 reads uniquely mapped to Citrobacter (multi-hits among diff. species in Citrobacter allowed) 75730 Citrobacter Citrobacter freundii 60297 Citrobacter Citrobacter amalonaticus 21718 Citrobacter Citrobacter rodentium ICC168 17845 Citrobacter Citrobacter freundii CFNIH1 17443 Citrobacter Citrobacter amalonaticus Y19 15334 Citrobacter Citrobacter koseri ATCC BAA-895 11639 Citrobacter Citrobacter braakii 11386 Citrobacter Citrobacter sp. FDAARGOS_156 8450 Citrobacter Citrobacter werkmanii # 22088 reads uniquely mapped to Clostridium (multi-hits among diff. species in Clostridium allowed) 7663 Clostridium Clostridium sulfidigenes 3209 Clostridium Clostridium formicaceticum 2289 Clostridium Clostridium sp. M62/1 979 Clostridium Clostridium sp. KNHs205 757 Clostridium Clostridium aceticum 461 Clostridium Clostridium sp. L2-50 389 Clostridium Clostridium sp. LF2 383 Clostridium Clostridium sp. ASF356 379 Clostridium Clostridium sp. BNL1100 356 Clostridium Clostridium botulinum 306 Clostridium Clostridium phoceensis 293 Clostridium Clostridium pasteurianum DSM 525 = ATCC 6013 265 Clostridium Clostridium algidicarnis 262 Clostridium Clostridium saccharobutylicum 230 Clostridium Clostridium tetani 12124569 218 Clostridium Clostridium sp. KNHs209 193 Clostridium Clostridium autoethanogenum DSM 10061 169 Clostridium Clostridium novyi NT 169 Clostridium Clostridium cellulovorans 743B 159 Clostridium Clostridium butyricum 139 Clostridium Clostridium botulinum BKT015925 124 Clostridium Clostridium beijerinckii 123 Clostridium Clostridium ihumii AP5 115 Clostridium Clostridium botulinum A3 str. Loch Maree 115 Clostridium Clostridium botulinum B str. Eklund 17B (NRP) 111 Clostridium Clostridium pasteurianum 99 Clostridium Clostridium bornimense 99 Clostridium Clostridium sp. KNHs214 96 Clostridium Clostridium pasteurianum BC1 95 Clostridium Clostridium ljungdahlii DSM 13528 83 Clostridium Clostridium perfringens 81 Clostridium Clostridium sp. SY8519 78 Clostridium Clostridium beijerinckii ATCC 35702 76 Clostridium Clostridium botulinum 202F 75 Clostridium Clostridium beijerinckii NRRL B-598 69 Clostridium Clostridium estertheticum subsp. estertheticum 66 Clostridium Clostridium saccharobutylicum DSM 13864 64 Clostridium Clostridium saccharoperbutylacetonicum 58 Clostridium Clostridium beijerinckii NCIMB 8052 58 Clostridium Clostridium sporogenes 56 Clostridium Clostridium botulinum CDC_1436 56 Clostridium Clostridium botulinum E3 str. Alaska E43 52 Clostridium Clostridium saccharoperbutylacetonicum N1-4(HMT) 48 Clostridium Clostridium tetani E88 45 Clostridium Clostridium polynesiense 45 Clostridium Clostridium sp. CL-6 45 Clostridium Clostridium intestinale URNW 45 Clostridium Clostridium carboxidivorans P7 43 Clostridium Clostridium neonatale 37 Clostridium Clostridium botulinum B1 str. Okra 37 Clostridium Clostridium scatologenes 35 Clostridium Clostridium argentinense 35 Clostridium Clostridium botulinum A str. Hall 35 Clostridium Clostridium taeniosporum 34 Clostridium Clostridium botulinum A2 str. Kyoto 32 Clostridium Clostridium botulinum A str. ATCC 3502 32 Clostridium Clostridium botulinum F str. 230613 30 Clostridium Clostridium botulinum H04402 065 27 Clostridium Clostridium sp. ND2 26 Clostridium Clostridium botulinum Ba4 str. 657 25 Clostridium Clostridium botulinum A str. ATCC 19397 23 Clostridium Clostridium acetobutylicum EA 2018 22 Clostridium Clostridium chauvoei JF4335 22 Clostridium Clostridium botulinum F str. Langeland 22 Clostridium Clostridium acetobutylicum DSM 1731 21 Clostridium Clostridium perfringens ATCC 13124 20 Clostridium Clostridium sp. KLE 1755 20 Clostridium Clostridium cylindrosporum DSM 605 17 Clostridium Clostridium perfringens str. 13 17 Clostridium Clostridium kluyveri DSM 555 15 Clostridium Clostridium baratii 13 Clostridium Clostridium acetobutylicum ATCC 824 11 Clostridium Clostridium homopropionicum DSM 5847 10 Clostridium Clostridium kluyveri NBRC 12016 9 Clostridium Clostridium kluyveri 8 Clostridium Clostridium baratii str. Sullivan 7 Clostridium Clostridium tunisiense TJ 7 Clostridium Clostridium sp. DMHC 10 7 Clostridium Clostridium sp. mt5 6 Clostridium Clostridium disporicum 5 Clostridium Clostridium arbusti SL206 5 Clostridium Clostridium senegalense JC122 4 Clostridium Clostridium sartagoforme AAU1 4 Clostridium Clostridium ventriculi 4 Clostridium NZ_JMFY01000004 4 Clostridium Clostridium argentinense CDC 2741 4 Clostridium Clostridium tyrobutyricum 3 Clostridium Clostridium celatum DSM 1785 2 Clostridium Clostridium colicanis 209318 1 Clostridium Clostridium akagii DSM 12554 1 Clostridium Clostridium cadaveris AGR2141 1 Clostridium Clostridium sp. Ade.TY # 73786 reads uniquely mapped to Cobetia (multi-hits among diff. species in Cobetia allowed) 73786 Cobetia Cobetia crustatorum # 89505 reads uniquely mapped to Colwellia (multi-hits among diff. species in Colwellia allowed) 29314 Colwellia Colwellia sp. PAMC 20917 25734 Colwellia Colwellia psychrerythraea 18701 Colwellia Colwellia sp. MT41 15367 Colwellia Colwellia psychrerythraea 34H 389 Colwellia Colwellia piezophila ATCC BAA-637 # 55057 reads uniquely mapped to Comamonas (multi-hits among diff. species in Comamonas allowed) 20968 Comamonas Comamonas kerstersii 13657 Comamonas Comamonas testosteroni TK102 5911 Comamonas Comamonas aquatica 4680 Comamonas Comamonas testosteroni CNB-2 3200 Comamonas Comamonas testosteroni P19 2336 Comamonas Comamonas granuli NBRC 101663 2336 Comamonas Comamonas badia DSM 17552 1671 Comamonas Comamonas composti DSM 21721 298 Comamonas Comamonas sp. B-9 # 7538 reads uniquely mapped to Conexibacter (multi-hits among diff. species in Conexibacter allowed) 4549 Conexibacter Conexibacter woesei DSM 14684 2989 Conexibacter Conexibacter woesei Iso977N # 5178 reads uniquely mapped to Corynebacterium (multi-hits among diff. species in Corynebacterium allowed) 569 Corynebacterium Corynebacterium variabile 411 Corynebacterium Corynebacterium pseudotuberculosis 308 Corynebacterium Corynebacterium uterequi 282 Corynebacterium Corynebacterium sp. ATCC 6931 253 Corynebacterium Corynebacterium camporealensis 224 Corynebacterium Corynebacterium singulare 163 Corynebacterium Corynebacterium falsenii 158 Corynebacterium Corynebacterium glutamicum 123 Corynebacterium Corynebacterium argentoratense DSM 44202 108 Corynebacterium Corynebacterium flavescens 104 Corynebacterium Corynebacterium glyciniphilum AJ 3170 98 Corynebacterium Corynebacterium sphenisci DSM 44792 95 Corynebacterium Corynebacterium variabile DSM 44702 93 Corynebacterium Corynebacterium kroppenstedtii DSM 44385 87 Corynebacterium Corynebacterium aquilae DSM 44791 85 Corynebacterium Corynebacterium minutissimum 81 Corynebacterium Corynebacterium halotolerans YIM 70093 = DSM 44683 78 Corynebacterium Corynebacterium simulans 75 Corynebacterium Corynebacterium terpenotabidum Y-11 75 Corynebacterium Corynebacterium ammoniagenes 58 Corynebacterium Corynebacterium freneyi DNF00450 58 Corynebacterium Corynebacterium phocae 57 Corynebacterium Corynebacterium doosanense CAU 212 = DSM 45436 55 Corynebacterium Corynebacterium maris DSM 45190 53 Corynebacterium Corynebacterium aurimucosum 52 Corynebacterium Corynebacterium ammoniagenes DSM 20306 49 Corynebacterium Corynebacterium genitalium ATCC 33030 49 Corynebacterium Corynebacterium efficiens YS-314 48 Corynebacterium Corynebacterium stationis 48 Corynebacterium Corynebacterium lactis RW2-5 45 Corynebacterium Corynebacterium glutamicum ATCC 13032 42 Corynebacterium Corynebacterium ulcerans 41 Corynebacterium Corynebacterium atypicum 40 Corynebacterium Corynebacterium pseudodiphtheriticum DSM 44287 35 Corynebacterium Corynebacterium humireducens NBRC 106098 = DSM 45392 31 Corynebacterium Corynebacterium glutamicum MB001 31 Corynebacterium Corynebacterium resistens DSM 45100 31 Corynebacterium Corynebacterium ureicelerivorans 27 Corynebacterium Corynebacterium nuruki S6-4 26 Corynebacterium Corynebacterium ciconiae DSM 44920 26 Corynebacterium Corynebacterium pyruviciproducens ATCC BAA-1742 26 Corynebacterium Corynebacterium accolens ATCC 49725 26 Corynebacterium Corynebacterium matruchotii ATCC 14266 26 Corynebacterium Corynebacterium aurimucosum ATCC 700975 25 Corynebacterium Corynebacterium halotolerans 24 Corynebacterium Corynebacterium testudinoris 23 Corynebacterium Corynebacterium glutamicum ZL-6 23 Corynebacterium Corynebacterium imitans 20 Corynebacterium Corynebacterium diphtheriae 20 Corynebacterium Corynebacterium glutamicum K051 20 Corynebacterium Corynebacterium jeddahense 19 Corynebacterium Corynebacterium urealyticum DSM 7111 19 Corynebacterium Corynebacterium jeikeium K411 18 Corynebacterium Corynebacterium capitovis DSM 44611 17 Corynebacterium [Brevibacterium] flavum ZL-1 16 Corynebacterium Corynebacterium kutscheri 16 Corynebacterium Corynebacterium casei LMG S-19264 16 Corynebacterium Corynebacterium frankenforstense DSM 45800 14 Corynebacterium Corynebacterium callunae DSM 20147 14 Corynebacterium Corynebacterium diphtheriae INCA 402 13 Corynebacterium Corynebacterium crudilactis 13 Corynebacterium Corynebacterium massiliense DSM 45435 12 Corynebacterium Corynebacterium glutamicum R 12 Corynebacterium Corynebacterium sp. NML98-0116 12 Corynebacterium Corynebacterium urealyticum DSM 7109 11 Corynebacterium Corynebacterium diphtheriae 241 11 Corynebacterium Corynebacterium vitaeruminis DSM 20294 10 Corynebacterium Corynebacterium epidermidicanis 10 Corynebacterium Corynebacterium mustelae 10 Corynebacterium Corynebacterium glutamicum SCgG1 10 Corynebacterium Corynebacterium glutamicum SCgG2 10 Corynebacterium Corynebacterium pseudotuberculosis 1/06-A 10 Corynebacterium [Brevibacterium] flavum 9 Corynebacterium Corynebacterium deserti GIMN1.010 9 Corynebacterium Corynebacterium diphtheriae 31A 9 Corynebacterium Corynebacterium pseudotuberculosis 258 9 Corynebacterium Corynebacterium diphtheriae VA01 9 Corynebacterium Corynebacterium diphtheriae HC03 8 Corynebacterium Corynebacterium riegelii 8 Corynebacterium Corynebacterium timonense 5401744 8 Corynebacterium Corynebacterium ulcerans FRC58 8 Corynebacterium Corynebacterium falsenii DSM 44353 8 Corynebacterium Corynebacterium pseudotuberculosis 267 8 Corynebacterium Corynebacterium ulcerans 809 8 Corynebacterium Corynebacterium pseudotuberculosis 42/02-A 8 Corynebacterium Corynebacterium diphtheriae HC01 8 Corynebacterium NC_017303 8 Corynebacterium Corynebacterium diphtheriae CDCE 8392 8 Corynebacterium Corynebacterium marinum DSM 44953 7 Corynebacterium Corynebacterium diphtheriae PW8 7 Corynebacterium Corynebacterium glucuronolyticum ATCC 51867 7 Corynebacterium Corynebacterium pseudotuberculosis 3/99-5 7 Corynebacterium Corynebacterium afermentans subsp. afermentans 7 Corynebacterium Corynebacterium pseudotuberculosis PAT10 7 Corynebacterium Corynebacterium ulcerans BR-AD22 6 Corynebacterium Corynebacterium tuscaniense DNF00037 6 Corynebacterium Corynebacterium pseudotuberculosis 316 6 Corynebacterium Corynebacterium pseudotuberculosis 1002 6 Corynebacterium Corynebacterium ulcerans 0102 6 Corynebacterium Corynebacterium diphtheriae HC04 6 Corynebacterium Corynebacterium xerosis NBRC 16721 5 Corynebacterium Corynebacterium bovis DSM 20582 = CIP 54.80 5 Corynebacterium Corynebacterium diphtheriae NCTC 13129 5 Corynebacterium Corynebacterium amycolatum SK46 5 Corynebacterium Corynebacterium pseudotuberculosis C231 5 Corynebacterium NZ_CP012022 4 Corynebacterium Corynebacterium diphtheriae BH8 4 Corynebacterium NC_018019 4 Corynebacterium Corynebacterium diphtheriae C7 (beta) 4 Corynebacterium Corynebacterium durum F0235 4 Corynebacterium Corynebacterium ulceribovis DSM 45146 4 Corynebacterium Corynebacterium pseudotuberculosis 31 3 Corynebacterium Corynebacterium renale 3 Corynebacterium Corynebacterium pseudotuberculosis P54B96 3 Corynebacterium Corynebacterium pseudotuberculosis FRC41 3 Corynebacterium Corynebacterium ulcerans FRC11 2 Corynebacterium Corynebacterium lipophiloflavum DSM 44291 1 Corynebacterium NC_017307 1 Corynebacterium Corynebacterium sputi DSM 45148 1 Corynebacterium Corynebacterium freiburgense DSM 45254 1 Corynebacterium Corynebacterium lubricantis DSM 45231 1 Corynebacterium Corynebacterium caspium DSM 44850 1 Corynebacterium Corynebacterium diphtheriae HC02 # 20240 reads uniquely mapped to Criblamydia (multi-hits among diff. species in Criblamydia allowed) 20240 Criblamydia Criblamydia sequanensis CRIB-18 # 3350 reads uniquely mapped to Crinalium (multi-hits among diff. species in Crinalium allowed) 3350 Crinalium Crinalium epipsammum PCC 9333 # 3521 reads uniquely mapped to Crocinitomix (multi-hits among diff. species in Crocinitomix allowed) 3521 Crocinitomix Crocinitomix catalasitica ATCC 23190 # 2966 reads uniquely mapped to Crocosphaera (multi-hits among diff. species in Crocosphaera allowed) 2966 Crocosphaera Crocosphaera watsonii WH 8501 # 214199 reads uniquely mapped to Cronobacter (multi-hits among diff. species in Cronobacter allowed) 33573 Cronobacter Cronobacter sakazakii 26912 Cronobacter Cronobacter universalis NCTC 9529 22307 Cronobacter Cronobacter dublinensis subsp. dublinensis LMG 23823 19520 Cronobacter Cronobacter turicensis z3032 18792 Cronobacter Cronobacter sakazakii SP291 17916 Cronobacter Cronobacter sakazakii ATCC BAA-894 17073 Cronobacter Cronobacter muytjensii ATCC 51329 16091 Cronobacter Cronobacter sakazakii ES15 14591 Cronobacter Cronobacter condimenti 1330 13751 Cronobacter Cronobacter malonaticus LMG 23826 13673 Cronobacter Cronobacter malonaticus # 53713 reads uniquely mapped to Cupriavidus (multi-hits among diff. species in Cupriavidus allowed) 8811 Cupriavidus Cupriavidus basilensis 5889 Cupriavidus Cupriavidus sp. USMAHM13 5816 Cupriavidus Cupriavidus sp. USMAA2-4 5796 Cupriavidus Cupriavidus sp. USMAA1020 5361 Cupriavidus Cupriavidus taiwanensis LMG 19424 4615 Cupriavidus Ralstonia eutropha JMP134 4269 Cupriavidus Ralstonia eutropha H16 4149 Cupriavidus Cupriavidus necator 4104 Cupriavidus Cupriavidus necator N-1 3219 Cupriavidus Cupriavidus gilardii CR3 1684 Cupriavidus Cupriavidus metallidurans CH34 # 2872 reads uniquely mapped to Curtobacterium (multi-hits among diff. species in Curtobacterium allowed) 685 Curtobacterium Curtobacterium sp. BH-2-1-1 675 Curtobacterium Curtobacterium sp. MR_MD2014 583 Curtobacterium Curtobacterium pusillum 306 Curtobacterium Curtobacterium sp. Leaf261 278 Curtobacterium Curtobacterium sp. Leaf183 206 Curtobacterium Curtobacterium flaccumfaciens UCD-AKU 139 Curtobacterium Curtobacterium oceanosedimentum # 1834 reads uniquely mapped to Cutibacterium (multi-hits among diff. species in Cutibacterium allowed) 341 Cutibacterium Cutibacterium acnes 331 Cutibacterium Cutibacterium avidum 295 Cutibacterium Cutibacterium granulosum DSM 20700 112 Cutibacterium Cutibacterium avidum 44067 80 Cutibacterium [Propionibacterium] namnetense SK182B-JCVI 79 Cutibacterium Propionibacterium acnes 6609 67 Cutibacterium Propionibacterium acnes HL096PA1 60 Cutibacterium Propionibacterium acnes 266 60 Cutibacterium Propionibacterium acnes TypeIA2 P.acn33 59 Cutibacterium Propionibacterium acnes KPA171202 58 Cutibacterium Propionibacterium acnes SK137 58 Cutibacterium Propionibacterium acnes TypeIA2 P.acn17 51 Cutibacterium Propionibacterium acnes hdn-1 47 Cutibacterium Propionibacterium acnes subsp. defendens ATCC 11828 47 Cutibacterium Propionibacterium acnes C1 45 Cutibacterium Propionibacterium acnes TypeIA2 P.acn31 44 Cutibacterium [Propionibacterium] humerusii P08 # 1253 reads uniquely mapped to Cyanobacterium (multi-hits among diff. species in Cyanobacterium allowed) 1253 Cyanobacterium Cyanobacterium aponinum PCC 10605 # 11816 reads uniquely mapped to Cyanothece (multi-hits among diff. species in Cyanothece allowed) 9743 Cyanothece Cyanothece sp. PCC 7425 1190 Cyanothece Cyanothece sp. ATCC 51142 433 Cyanothece Cyanothece sp. PCC 7424 166 Cyanothece Cyanothece sp. PCC 8802 154 Cyanothece Cyanothece sp. PCC 8801 130 Cyanothece Cyanothece sp. PCC 7822 # 60222 reads uniquely mapped to Cycloclasticus (multi-hits among diff. species in Cycloclasticus allowed) 26313 Cycloclasticus Cycloclasticus zancles 78-ME 20655 Cycloclasticus Cycloclasticus sp. P1 13254 Cycloclasticus Cycloclasticus pugetii PS-1 # 3879 reads uniquely mapped to Cylindrospermum (multi-hits among diff. species in Cylindrospermum allowed) 3879 Cylindrospermum Cylindrospermum stagnale PCC 7417 # 5629 reads uniquely mapped to Cytophaga (multi-hits among diff. species in Cytophaga allowed) 4595 Cytophaga Cytophaga hutchinsonii ATCC 33406 1034 Cytophaga Cytophaga aurantiaca DSM 3654 # 64329 reads uniquely mapped to Dechloromonas (multi-hits among diff. species in Dechloromonas allowed) 52406 Dechloromonas Dechloromonas agitata is5 11923 Dechloromonas Dechloromonas aromatica RCB # 4224 reads uniquely mapped to Dehalobacter (multi-hits among diff. species in Dehalobacter allowed) 2324 Dehalobacter Dehalobacter sp. FTH1 811 Dehalobacter Dehalobacter sp. DCA 804 Dehalobacter Dehalobacter sp. CF 285 Dehalobacter Dehalobacter restrictus DSM 9455 # 25957 reads uniquely mapped to Deinococcus (multi-hits among diff. species in Deinococcus allowed) 11331 Deinococcus Deinococcus misasensis DSM 22328 4021 Deinococcus Deinococcus peraridilitoris DSM 19664 2529 Deinococcus Deinococcus gobiensis I-0 1927 Deinococcus Deinococcus puniceus 1472 Deinococcus Deinococcus proteolyticus MRP 767 Deinococcus Deinococcus phoenicis 619 Deinococcus Deinococcus geothermalis DSM 11300 596 Deinococcus Deinococcus apachensis DSM 19763 584 Deinococcus Deinococcus radiodurans R1 446 Deinococcus Deinococcus sp. YIM 77859 434 Deinococcus Deinococcus deserti VCD115 298 Deinococcus Deinococcus maricopensis DSM 21211 251 Deinococcus Deinococcus swuensis 191 Deinococcus Deinococcus pimensis DSM 21231 88 Deinococcus NZ_LIYN01000003 75 Deinococcus Deinococcus wulumuqiensis R13 71 Deinococcus Deinococcus marmoris DSM 12784 68 Deinococcus Deinococcus frigens DSM 12807 61 Deinococcus Deinococcus soli Cha et al. 2016 42 Deinococcus Deinococcus actinosclerus 33 Deinococcus Deinococcus murrayi DSM 11303 22 Deinococcus NZ_LIYN01000546 20 Deinococcus Deinococcus ficus DSM 19119 7 Deinococcus NZ_LIYN01000566 4 Deinococcus NZ_LIYN01000313 # 44907 reads uniquely mapped to Delftia (multi-hits among diff. species in Delftia allowed) 12505 Delftia Delftia sp. Cs1-4 10827 Delftia Delftia tsuruhatensis 10824 Delftia Delftia sp. HK171 10751 Delftia Delftia acidovorans SPH-1 # 2900 reads uniquely mapped to Dermacoccus (multi-hits among diff. species in Dermacoccus allowed) 2159 Dermacoccus Dermacoccus nishinomiyaensis 741 Dermacoccus Dermacoccus sp. PE3 # 35521 reads uniquely mapped to Desulfobulbus (multi-hits among diff. species in Desulfobulbus allowed) 15196 Desulfobulbus Desulfobulbus elongatus DSM 2908 8848 Desulfobulbus Desulfobulbus mediterraneus DSM 13871 7421 Desulfobulbus Desulfobulbus japonicus DSM 18378 4056 Desulfobulbus Desulfobulbus propionicus DSM 2032 # 22268 reads uniquely mapped to Desulfococcus (multi-hits among diff. species in Desulfococcus allowed) 11265 Desulfococcus Desulfococcus multivorans 11003 Desulfococcus Desulfococcus oleovorans Hxd3 # 9703 reads uniquely mapped to Desulfohalobium (multi-hits among diff. species in Desulfohalobium allowed) 9703 Desulfohalobium Desulfohalobium retbaense DSM 5692 # 15098 reads uniquely mapped to Desulfomonile (multi-hits among diff. species in Desulfomonile allowed) 15098 Desulfomonile Desulfomonile tiedjei DSM 6799 # 20500 reads uniquely mapped to Desulfonatronospira (multi-hits among diff. species in Desulfonatronospira allowed) 20500 Desulfonatronospira Desulfonatronospira thiodismutans ASO3-1 # 23499 reads uniquely mapped to Desulfotomaculum (multi-hits among diff. species in Desulfotomaculum allowed) 8201 Desulfotomaculum Desulfotomaculum ruminis DSM 2154 3988 Desulfotomaculum Desulfotomaculum reducens MI-1 3389 Desulfotomaculum Desulfotomaculum nigrificans CO-1-SRB 3005 Desulfotomaculum Desulfotomaculum hydrothermale Lam5 = DSM 18033 2538 Desulfotomaculum Desulfotomaculum acetoxidans DSM 771 1143 Desulfotomaculum Desulfotomaculum gibsoniae DSM 7213 799 Desulfotomaculum Desulfotomaculum ferrireducens 402 Desulfotomaculum Desulfotomaculum alkaliphilum DSM 12257 28 Desulfotomaculum Desulfotomaculum thermocisternum DSM 10259 6 Desulfotomaculum Desulfotomaculum alcoholivorax DSM 16058 # 41625 reads uniquely mapped to Desulfovibrio (multi-hits among diff. species in Desulfovibrio allowed) 8643 Desulfovibrio Desulfovibrio putealis DSM 16056 4349 Desulfovibrio Desulfovibrio frigidus DSM 17176 4161 Desulfovibrio Desulfovibrio sp. U5L 3856 Desulfovibrio Desulfovibrio fructosivorans JJ 3542 Desulfovibrio Desulfovibrio sp. L21-Syr-AB 2058 Desulfovibrio Desulfovibrio africanus str. Walvis Bay 1618 Desulfovibrio Desulfovibrio cf. magneticus IFRC170 1517 Desulfovibrio Desulfovibrio alkalitolerans DSM 16529 1463 Desulfovibrio Desulfovibrio sp. X2 1270 Desulfovibrio Desulfovibrio magneticus RS-1 1164 Desulfovibrio Desulfovibrio hydrothermalis AM13 = DSM 14728 832 Desulfovibrio Desulfovibrio salexigens DSM 2638 790 Desulfovibrio Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 725 Desulfovibrio Desulfovibrio piezophilus C1TLV30 570 Desulfovibrio Desulfovibrio aminophilus DSM 12254 558 Desulfovibrio Desulfovibrio vulgaris str. 'Miyazaki F' 488 Desulfovibrio Desulfovibrio alcoholivorans DSM 5433 466 Desulfovibrio Desulfovibrio fairfieldensis 450 Desulfovibrio Desulfovibrio desulfuricans ND132 407 Desulfovibrio Desulfovibrio alaskensis G20 396 Desulfovibrio Desulfovibrio gigas DSM 1382 = ATCC 19364 384 Desulfovibrio Desulfovibrio indicus 287 Desulfovibrio Desulfovibrio aespoeensis Aspo-2 252 Desulfovibrio Desulfovibrio desulfuricans subsp. desulfuricans DSM 642 236 Desulfovibrio Desulfovibrio oxyclinae DSM 11498 230 Desulfovibrio Desulfovibrio piger 160 Desulfovibrio Desulfovibrio longus DSM 6739 137 Desulfovibrio Desulfovibrio bastinii DSM 16055 137 Desulfovibrio Desulfovibrio vulgaris DP4 132 Desulfovibrio Desulfovibrio brasiliensis JCM 12178 117 Desulfovibrio Desulfovibrio vulgaris str. Hildenborough 111 Desulfovibrio Desulfovibrio vulgaris RCH1 66 Desulfovibrio Desulfovibrio inopinatus DSM 10711 32 Desulfovibrio Desulfovibrio cuneatus DSM 11391 21 Desulfovibrio Desulfovibrio zosterae DSM 11974 # 1741 reads uniquely mapped to Dethiosulfovibrio (multi-hits among diff. species in Dethiosulfovibrio allowed) 1741 Dethiosulfovibrio Dethiosulfovibrio peptidovorans DSM 11002 # 17396 reads uniquely mapped to Devosia (multi-hits among diff. species in Devosia allowed) 5739 Devosia Devosia chinhatensis 2329 Devosia Devosia sp. LC5 2232 Devosia Devosia sp. H5989 1595 Devosia Devosia geojensis 1493 Devosia Devosia psychrophila 1028 Devosia Devosia epidermidihirudinis 616 Devosia Devosia insulae DS-56 565 Devosia Devosia sp. A16 563 Devosia Devosia riboflavina 524 Devosia Devosia soli 524 Devosia Devosia sp. Root436 188 Devosia Devosia sp. Root685 # 208972 reads uniquely mapped to Dickeya (multi-hits among diff. species in Dickeya allowed) 64350 Dickeya Dickeya zeae EC1 55410 Dickeya Dickeya dadantii 3937 53492 Dickeya Dickeya zeae Ech586 35719 Dickeya Dickeya solani IPO 2222 1 Dickeya Dickeya paradisiaca NCPPB 2511 # 1027 reads uniquely mapped to Dictyoglomus (multi-hits among diff. species in Dictyoglomus allowed) 536 Dictyoglomus Dictyoglomus turgidum DSM 6724 491 Dictyoglomus Dictyoglomus thermophilum H-6-12 # 9873 reads uniquely mapped to Dolosigranulum (multi-hits among diff. species in Dolosigranulum allowed) 9873 Dolosigranulum Dolosigranulum pigrum ATCC 51524 # 93150 reads uniquely mapped to Ectothiorhodospira (multi-hits among diff. species in Ectothiorhodospira allowed) 37233 Ectothiorhodospira Ectothiorhodospira sp. BSL-9 36084 Ectothiorhodospira Ectothiorhodospira haloalkaliphila ATCC 51935 19833 Ectothiorhodospira Ectothiorhodospira sp. PHS-1 # 192801 reads uniquely mapped to Edwardsiella (multi-hits among diff. species in Edwardsiella allowed) 31067 Edwardsiella Edwardsiella tarda 28940 Edwardsiella Edwardsiella piscicida 28218 Edwardsiella Edwardsiella hoshinae 23006 Edwardsiella Edwardsiella ictaluri 93-146 19757 Edwardsiella Edwardsiella piscicida C07-087 19315 Edwardsiella Edwardsiella sp. EA181011 14236 Edwardsiella Edwardsiella anguillarum ET080813 14169 Edwardsiella Edwardsiella tarda FL6-60 14093 Edwardsiella Edwardsiella tarda EIB202 # 747 reads uniquely mapped to Emticicia (multi-hits among diff. species in Emticicia allowed) 747 Emticicia NC_018748 # 99350 reads uniquely mapped to Endozoicomonas (multi-hits among diff. species in Endozoicomonas allowed) 64283 Endozoicomonas Endozoicomonas elysicola 23266 Endozoicomonas Endozoicomonas montiporae CL-33 11801 Endozoicomonas Endozoicomonas numazuensis # 240960 reads uniquely mapped to Enterobacter (multi-hits among diff. species in Enterobacter allowed) 47644 Enterobacter Enterobacter cloacae 35207 Enterobacter Enterobacter sp. R4-368 26569 Enterobacter Enterobacter sp. FY-07 13815 Enterobacter Enterobacter lignolyticus SCF1 13310 Enterobacter Enterobacter hormaechei subsp. steigerwaltii 12547 Enterobacter Enterobacter hormaechei subsp. oharae 10159 Enterobacter Enterobacter sp. 638 6810 Enterobacter Enterobacter asburiae 5084 Enterobacter Enterobacter cloacae subsp. dissolvens SDM 4667 Enterobacter Enterobacter xiangfangensis 4576 Enterobacter Enterobacter cloacae ECNIH2 4321 Enterobacter Enterobacter cloacae complex 'Hoffmann cluster III' 4289 Enterobacter Enterobacter cloacae P101 4212 Enterobacter Enterobacter cloacae ECNIH3 4208 Enterobacter Enterobacter hormaechei subsp. hormaechei 4072 Enterobacter Enterobacter cloacae ECR091 4044 Enterobacter Enterobacter ludwigii 3818 Enterobacter Enterobacter cloacae complex sp. 35734 3762 Enterobacter Enterobacter asburiae L1 3660 Enterobacter Enterobacter cloacae complex 'Hoffmann cluster IV' 3430 Enterobacter Enterobacter sp. E20 3418 Enterobacter Enterobacter sp. HK169 3285 Enterobacter Enterobacter cloacae subsp. cloacae ATCC 13047 3196 Enterobacter Enterobacter asburiae LF7a 3126 Enterobacter Enterobacter cloacae EcWSU1 2889 Enterobacter Enterobacter kobei 2471 Enterobacter Enterobacter sp. ODB01 2371 Enterobacter Enterobacter cloacae subsp. cloacae ENHKU01 # 24040 reads uniquely mapped to Enterococcus (multi-hits among diff. species in Enterococcus allowed) 7120 Enterococcus Enterococcus faecium 4390 Enterococcus Enterococcus columbae DSM 7374 = ATCC 51263 1991 Enterococcus Enterococcus asini ATCC 700915 1178 Enterococcus Enterococcus faecalis 1023 Enterococcus Enterococcus durans 500 Enterococcus Enterococcus hirae ATCC 9790 451 Enterococcus Enterococcus mundtii QU 25 449 Enterococcus Enterococcus faecium NRRL B-2354 430 Enterococcus Enterococcus hirae 421 Enterococcus Enterococcus faecium DO 398 Enterococcus Enterococcus faecium T110 384 Enterococcus Enterococcus gilvus ATCC BAA-350 380 Enterococcus Enterococcus faecium Aus0085 370 Enterococcus Enterococcus gallinarum 370 Enterococcus Enterococcus haemoperoxidus ATCC BAA-382 361 Enterococcus Enterococcus faecium Aus0004 359 Enterococcus Enterococcus dispar ATCC 51266 359 Enterococcus Enterococcus sulfureus ATCC 49903 323 Enterococcus Enterococcus faecalis OG1RF 304 Enterococcus Enterococcus faecalis ATCC 29212 295 Enterococcus NZ_CP015410 289 Enterococcus Enterococcus faecalis D32 281 Enterococcus Enterococcus faecalis str. Symbioflor 1 276 Enterococcus Enterococcus faecalis DENG1 271 Enterococcus Enterococcus faecalis V583 260 Enterococcus Enterococcus casseliflavus EC20 167 Enterococcus Enterococcus massiliensis 167 Enterococcus Enterococcus phoeniculicola ATCC BAA-412 164 Enterococcus Enterococcus cecorum 115 Enterococcus Enterococcus pallens ATCC BAA-351 77 Enterococcus Enterococcus faecalis 13-SD-W-01 67 Enterococcus Enterococcus italicus DSM 15952 41 Enterococcus Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 9 Enterococcus Enterococcus avium ATCC 14025 # 4410 reads uniquely mapped to Entomoplasma (multi-hits among diff. species in Entomoplasma allowed) 2218 Entomoplasma Entomoplasma somnilux ATCC 49194 1349 Entomoplasma Entomoplasma lucivorax ATCC 49196 843 Entomoplasma Entomoplasma luminosum ATCC 49195 # 217765 reads uniquely mapped to Erwinia (multi-hits among diff. species in Erwinia allowed) 35074 Erwinia Erwinia gerundensis 31357 Erwinia Erwinia oleae 27397 Erwinia Erwinia tasmaniensis Et1/99 22140 Erwinia Erwinia amylovora CFBP1430 19565 Erwinia Erwinia amylovora ATCC 49946 18952 Erwinia Erwinia billingiae Eb661 13510 Erwinia Erwinia pyrifoliae Ep1/96 12174 Erwinia Erwinia sp. Ejp617 10272 Erwinia Erwinia iniecta 9328 Erwinia Erwinia tracheiphila PSU-1 5785 Erwinia Erwinia sp. Leaf53 4711 Erwinia Erwinia toletana DAPP-PG 735 4102 Erwinia Erwinia typographi 2659 Erwinia Erwinia persicina NBRC 102418 739 Erwinia Candidatus Erwinia sp. ErCipseudotaxifoliae # 18702 reads uniquely mapped to Erysipelatoclostridium (multi-hits among diff. species in Erysipelatoclostridium allowed) 13398 Erysipelatoclostridium Erysipelatoclostridium ramosum DSM 1402 3252 Erysipelatoclostridium [Clostridium] innocuum 2959 1519 Erysipelatoclostridium [Clostridium] saccharogumia DSM 17460 533 Erysipelatoclostridium [Clostridium] spiroforme DSM 1552 # 12403 reads uniquely mapped to Erythrobacter (multi-hits among diff. species in Erythrobacter allowed) 3598 Erythrobacter Erythrobacter longus 2421 Erythrobacter Erythrobacter litoralis 1966 Erythrobacter Erythrobacter sp. SG61-1L 902 Erythrobacter Erythrobacter marinus 855 Erythrobacter Erythrobacter sp. NAP1 758 Erythrobacter Erythrobacter atlanticus 542 Erythrobacter Erythrobacter sp. JL475 306 Erythrobacter Erythrobacter vulgaris 294 Erythrobacter Erythrobacter luteus 287 Erythrobacter Erythrobacter citreus LAMA 915 276 Erythrobacter Erythrobacter litoralis HTCC2594 198 Erythrobacter Erythrobacter gangjinensis # 250727 reads uniquely mapped to Escherichia (multi-hits among diff. species in Escherichia allowed) 147541 Escherichia Escherichia coli 8668 Escherichia Escherichia coli O157:H7 8096 Escherichia Escherichia coli K-12 3216 Escherichia Escherichia coli str. K-12 substr. MG1655 1856 Escherichia Escherichia coli O145:H28 str. RM13516 1776 Escherichia Escherichia coli O145:H28 str. RM12761 1697 Escherichia NZ_CP018770 1695 Escherichia Escherichia fergusonii ATCC 35469 1664 Escherichia Escherichia coli SMS-3-5 1621 Escherichia Escherichia coli PCN033 1595 Escherichia Escherichia coli ACN001 1567 Escherichia Escherichia albertii KF1 1559 Escherichia Escherichia coli RS218 1541 Escherichia Escherichia coli UTI89 1537 Escherichia Escherichia coli UMN026 1520 Escherichia Escherichia coli IHE3034 1507 Escherichia Escherichia coli O139:H28 str. E24377A 1507 Escherichia Escherichia coli KO11FL 1499 Escherichia Escherichia coli O145:H28 str. RM13514 1496 Escherichia Escherichia coli NU14 1467 Escherichia Escherichia coli O145:H28 str. RM12581 1442 Escherichia Escherichia coli 042 1394 Escherichia Escherichia coli UM146 1359 Escherichia Escherichia coli O157 1356 Escherichia Escherichia coli Nissle 1917 1295 Escherichia Escherichia coli ATCC 8739 1266 Escherichia Escherichia coli W 1243 Escherichia Escherichia coli APEC IMT5155 1233 Escherichia Escherichia coli B 1231 Escherichia Escherichia coli O7:K1 str. CE10 1216 Escherichia Escherichia coli DH1 1207 Escherichia Escherichia coli IAI39 1193 Escherichia Escherichia coli BL21(DE3) 1149 Escherichia NZ_CP014197 1046 Escherichia Escherichia coli SE11 1042 Escherichia Escherichia coli SE15 984 Escherichia Escherichia coli 1303 902 Escherichia NZ_CP014492 890 Escherichia Escherichia coli APEC O1 885 Escherichia Escherichia coli JJ1886 862 Escherichia Escherichia coli O104:H4 str. 2009EL-2071 859 Escherichia Escherichia coli 536 855 Escherichia Escherichia coli O104:H4 str. 2011C-3493 848 Escherichia Escherichia coli O104:H4 str. 2009EL-2050 817 Escherichia Escherichia coli O104:H4 str. C227-11 800 Escherichia Escherichia coli JJ1887 795 Escherichia Escherichia coli ECC-1470 759 Escherichia Escherichia coli ETEC H10407 734 Escherichia Escherichia coli O26:H11 str. 11368 700 Escherichia Escherichia coli O55:H7 str. CB9615 697 Escherichia Escherichia coli UMNK88 689 Escherichia Escherichia coli O103:H2 str. 12009 681 Escherichia Escherichia coli str. K-12 substr. W3110 679 Escherichia Escherichia coli LY180 666 Escherichia Escherichia coli O25b:H4-ST131 649 Escherichia Escherichia coli str. K-12 substr. DH10B 637 Escherichia Escherichia coli O157:H16 635 Escherichia Escherichia coli IAI1 634 Escherichia Escherichia coli O127:H6 str. E2348/69 633 Escherichia Escherichia coli 55989 631 Escherichia Escherichia coli str. K-12 substr. MDS42 631 Escherichia Escherichia coli O55:H7 str. RM12579 630 Escherichia Escherichia coli ABU 83972 620 Escherichia Escherichia coli P12b 619 Escherichia Escherichia coli O157:H7 str. Sakai 619 Escherichia Escherichia coli BW2952 618 Escherichia Escherichia coli str. K-12 substr. MC4100 617 Escherichia Escherichia coli Xuzhou21 615 Escherichia Escherichia coli O111:H- str. 11128 615 Escherichia Escherichia coli 'BL21-Gold(DE3)pLysS AG' 608 Escherichia Escherichia coli CFT073 608 Escherichia Escherichia coli O157:H7 str. EDL933 606 Escherichia Escherichia coli BW25113 598 Escherichia Escherichia albertii 596 Escherichia Escherichia coli str. 'clone D i14' 589 Escherichia Escherichia coli O157:H7 str. SS17 586 Escherichia Escherichia coli O83:H1 str. NRG 857C 582 Escherichia Escherichia coli B str. REL606 577 Escherichia Escherichia coli ATCC 25922 571 Escherichia Escherichia coli LF82 570 Escherichia Escherichia coli HS 567 Escherichia Escherichia coli str. Sanji 563 Escherichia Escherichia coli KLY 556 Escherichia Escherichia coli APEC O78 547 Escherichia Escherichia coli O157:H7 str. EC4115 546 Escherichia NZ_CP014670 545 Escherichia Escherichia coli str. 'clone D i2' 544 Escherichia Escherichia coli ER2796 536 Escherichia Escherichia coli VR50 529 Escherichia Escherichia coli O157:H7 str. SS52 526 Escherichia Escherichia coli O157:H7 str. TW14359 510 Escherichia Escherichia coli PCN061 465 Escherichia Escherichia vulneris NBRC 102420 # 19236 reads uniquely mapped to Exiguobacterium (multi-hits among diff. species in Exiguobacterium allowed) 2863 Exiguobacterium Exiguobacterium sp. MH3 2848 Exiguobacterium Exiguobacterium sibiricum 255-15 2816 Exiguobacterium Exiguobacterium sp. ZWU0009 2792 Exiguobacterium Exiguobacterium sp. U13-1 2158 Exiguobacterium Exiguobacterium undae 1737 Exiguobacterium Exiguobacterium sp. AT1b 1640 Exiguobacterium Exiguobacterium aurantiacum DSM 6208 1291 Exiguobacterium Exiguobacterium profundum 1030 Exiguobacterium Exiguobacterium antarcticum B7 61 Exiguobacterium Exiguobacterium aurantiacum # 17123 reads uniquely mapped to Facklamia (multi-hits among diff. species in Facklamia allowed) 5983 Facklamia Facklamia hominis CCUG 36813 5643 Facklamia Facklamia ignava CCUG 37419 5396 Facklamia Facklamia languida CCUG 37842 101 Facklamia Facklamia sourekii ATCC 700629 # 6923 reads uniquely mapped to Faecalibacterium (multi-hits among diff. species in Faecalibacterium allowed) 6923 Faecalibacterium Faecalibacterium prausnitzii A2-165 # 114702 reads uniquely mapped to Ferrimonas (multi-hits among diff. species in Ferrimonas allowed) 112264 Ferrimonas Ferrimonas balearica DSM 9799 2428 Ferrimonas Ferrimonas senticii DSM 18821 6 Ferrimonas Ferrimonas futtsuensis DSM 18154 4 Ferrimonas Ferrimonas kyonanensis DSM 18153 # 1685 reads uniquely mapped to Fibrisoma (multi-hits among diff. species in Fibrisoma allowed) 1685 Fibrisoma Fibrisoma limi BUZ 3 # 12283 reads uniquely mapped to Filomicrobium (multi-hits among diff. species in Filomicrobium allowed) 12283 Filomicrobium Candidatus Filomicrobium marinum # 4216 reads uniquely mapped to Finegoldia (multi-hits among diff. species in Finegoldia allowed) 4216 Finegoldia Finegoldia magna ATCC 29328 # 5730 reads uniquely mapped to Fischerella (multi-hits among diff. species in Fischerella allowed) 2901 Fischerella Fischerella sp. NIES-3754 2621 Fischerella Fischerella sp. PCC 9605 208 Fischerella Fischerella thermalis PCC 7521 # 1697 reads uniquely mapped to Flavihumibacter (multi-hits among diff. species in Flavihumibacter allowed) 913 Flavihumibacter Flavihumibacter solisilvae 627 Flavihumibacter Flavihumibacter petaseus NBRC 106054 157 Flavihumibacter Flavihumibacter sp. ZG627 # 23553 reads uniquely mapped to Flavobacterium (multi-hits among diff. species in Flavobacterium allowed) 14748 Flavobacterium Flavobacterium sp. B17 2862 Flavobacterium Flavobacterium columnare 1376 Flavobacterium Flavobacterium sp. Leaf359 505 Flavobacterium Flavobacterium psychrophilum 414 Flavobacterium Flavobacterium johnsoniae UW101 389 Flavobacterium Flavobacterium crassostreae 375 Flavobacterium Flavobacterium psychrophilum FPG3 358 Flavobacterium Flavobacterium johnsoniae 317 Flavobacterium Flavobacterium akiainvivens 301 Flavobacterium Flavobacterium psychrophilum JIP02/86 281 Flavobacterium Flavobacterium psychrophilum FPG101 241 Flavobacterium Flavobacterium sp. 83 220 Flavobacterium Flavobacterium gilvum 172 Flavobacterium Flavobacterium succinicans LMG 10402 139 Flavobacterium Flavobacterium branchiophilum FL-15 98 Flavobacterium Flavobacterium seoulense 88 Flavobacterium Flavobacterium columnare ATCC 49512 68 Flavobacterium Flavobacterium rivuli WB 3.3-2 = DSM 21788 60 Flavobacterium Flavobacterium beibuense F44-8 60 Flavobacterium Flavobacterium sp. ACAM 123 58 Flavobacterium Flavobacterium soli DSM 19725 58 Flavobacterium Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 52 Flavobacterium Flavobacterium aquatile LMG 4008 48 Flavobacterium Flavobacterium frigoris PS1 44 Flavobacterium Flavobacterium hydatis 42 Flavobacterium Flavobacterium antarcticum DSM 19726 39 Flavobacterium Flavobacterium gelidilacus DSM 15343 37 Flavobacterium Flavobacterium sp. PK15 34 Flavobacterium Flavobacterium indicum GPTSA100-9 = DSM 17447 16 Flavobacterium Flavobacterium sp. 316 15 Flavobacterium Flavobacterium cauense R2A-7 13 Flavobacterium Flavobacterium glycines 11 Flavobacterium Flavobacterium suncheonense GH29-5 = DSM 17707 8 Flavobacterium Flavobacterium filum DSM 17961 3 Flavobacterium Flavobacterium sasangense DSM 21067 3 Flavobacterium Flavobacterium enshiense DK69 # 68000 reads uniquely mapped to Fluoribacter (multi-hits among diff. species in Fluoribacter allowed) 68000 Fluoribacter Fluoribacter dumoffii NY 23 # 23667 reads uniquely mapped to Franconibacter (multi-hits among diff. species in Franconibacter allowed) 23667 Franconibacter Franconibacter pulveris DSM 19144 # 110630 reads uniquely mapped to Frischella (multi-hits among diff. species in Frischella allowed) 110630 Frischella Frischella perrara # 2432 reads uniquely mapped to Fusobacterium (multi-hits among diff. species in Fusobacterium allowed) 1187 Fusobacterium Fusobacterium hwasookii ChDC F174 201 Fusobacterium Fusobacterium nucleatum subsp. polymorphum 182 Fusobacterium Fusobacterium perfoetens ATCC 29250 108 Fusobacterium Fusobacterium hwasookii ChDC F300 85 Fusobacterium Fusobacterium periodonticum 2_1_31 83 Fusobacterium Fusobacterium hwasookii ChDC F206 79 Fusobacterium Fusobacterium nucleatum subsp. vincentii 3_1_27 73 Fusobacterium Fusobacterium nucleatum 67 Fusobacterium Fusobacterium nucleatum subsp. animalis 57 Fusobacterium Fusobacterium nucleatum subsp. nucleatum ATCC 25586 56 Fusobacterium Fusobacterium nucleatum subsp. vincentii 3_1_36A2 46 Fusobacterium Fusobacterium nucleatum subsp. animalis 7_1 44 Fusobacterium Fusobacterium nucleatum subsp. animalis 4_8 39 Fusobacterium Fusobacterium russii ATCC 25533 38 Fusobacterium Fusobacterium nucleatum subsp. nucleatum ChDC F316 31 Fusobacterium Fusobacterium necrophorum subsp. funduliforme ATCC 51357 29 Fusobacterium Fusobacterium ulcerans ATCC 49185 27 Fusobacterium Fusobacterium mortiferum ATCC 9817 # 110031 reads uniquely mapped to Gallaecimonas (multi-hits among diff. species in Gallaecimonas allowed) 110031 Gallaecimonas Gallaecimonas xiamenensis 3-C-1 # 50479 reads uniquely mapped to Gallionella (multi-hits among diff. species in Gallionella allowed) 50479 Gallionella Gallionella capsiferriformans ES-2 # 714 reads uniquely mapped to Gardnerella (multi-hits among diff. species in Gardnerella allowed) 178 Gardnerella Gardnerella vaginalis 409-05 158 Gardnerella Gardnerella vaginalis 134 Gardnerella Gardnerella vaginalis ATCC 14019 133 Gardnerella Gardnerella vaginalis HMP9231 111 Gardnerella Gardnerella vaginalis ATCC 14018 = JCM 11026 # 7265 reads uniquely mapped to Geitlerinema (multi-hits among diff. species in Geitlerinema allowed) 7265 Geitlerinema Geitlerinema sp. PCC 7407 # 19730 reads uniquely mapped to Gemella (multi-hits among diff. species in Gemella allowed) 13548 Gemella Gemella sp. oral taxon 928 4966 Gemella Gemella haemolysans ATCC 10379 1216 Gemella Gemella bergeriae ATCC 700627 # 24767 reads uniquely mapped to Geminicoccus (multi-hits among diff. species in Geminicoccus allowed) 24767 Geminicoccus Geminicoccus roseus DSM 18922 # 1337 reads uniquely mapped to Geminocystis (multi-hits among diff. species in Geminocystis allowed) 651 Geminocystis Geminocystis herdmanii PCC 6308 535 Geminocystis Geminocystis sp. NIES-3709 151 Geminocystis Geminocystis sp. NIES-3708 # 119 reads uniquely mapped to Gemmata (multi-hits among diff. species in Gemmata allowed) 119 Gemmata Gemmata obscuriglobus UQM 2246 # 23262 reads uniquely mapped to Geobacillus (multi-hits among diff. species in Geobacillus allowed) 5607 Geobacillus Geobacillus sp. WCH70 4609 Geobacillus Geobacillus thermodenitrificans 3884 Geobacillus Geobacillus subterraneus 2681 Geobacillus Geobacillus sp. Y4.1MC1 1921 Geobacillus Geobacillus thermodenitrificans NG80-2 843 Geobacillus Geobacillus thermoleovorans 804 Geobacillus Geobacillus stearothermophilus 10 443 Geobacillus Geobacillus genomosp. 3 418 Geobacillus NZ_CP014749 410 Geobacillus Geobacillus kaustophilus HTA426 366 Geobacillus Geobacillus sp. GHH01 366 Geobacillus Geobacillus sp. Y412MC52 341 Geobacillus Geobacillus thermoleovorans CCB_US3_UF5 278 Geobacillus Geobacillus sp. C56-T3 248 Geobacillus Geobacillus sp. Y412MC61 43 Geobacillus Geobacillus icigianus # 112436 reads uniquely mapped to Gilliamella (multi-hits among diff. species in Gilliamella allowed) 112436 Gilliamella Gilliamella apicola # 159 reads uniquely mapped to Gimesia (multi-hits among diff. species in Gimesia allowed) 159 Gimesia Gimesia maris DSM 8797 # 91520 reads uniquely mapped to Glaciecola (multi-hits among diff. species in Glaciecola allowed) 39229 Glaciecola Glaciecola sp. HTCC2999 29698 Glaciecola Glaciecola sp. 4H-3-7+YE-5 15226 Glaciecola Glaciecola punicea ACAM 611 6804 Glaciecola Glaciecola nitratireducens FR1064 563 Glaciecola Glaciecola pallidula DSM 14239 = ACAM 615 # 6472 reads uniquely mapped to Gloeobacter (multi-hits among diff. species in Gloeobacter allowed) 4059 Gloeobacter Gloeobacter kilaueensis JS1 2413 Gloeobacter Gloeobacter violaceus PCC 7421 # 4847 reads uniquely mapped to Gloeocapsa (multi-hits among diff. species in Gloeocapsa allowed) 3791 Gloeocapsa Gloeocapsa sp. PCC 73106 1056 Gloeocapsa Gloeocapsa sp. PCC 7428 # 4819 reads uniquely mapped to Gordonia (multi-hits among diff. species in Gordonia allowed) 789 Gordonia Gordonia araii NBRC 100433 463 Gordonia Gordonia terrae 450 Gordonia Gordonia sp. QH-11 437 Gordonia Gordonia sp. KTR9 374 Gordonia Gordonia effusa NBRC 100432 280 Gordonia Gordonia polyisoprenivorans VH2 265 Gordonia Gordonia shandongensis DSM 45094 265 Gordonia Gordonia amarae NBRC 15530 251 Gordonia Gordonia hirsuta DSM 44140 = NBRC 16056 248 Gordonia Gordonia neofelifaecis NRRL B-59395 231 Gordonia Gordonia kroppenstedtii DSM 45133 192 Gordonia Gordonia bronchialis DSM 43247 91 Gordonia Gordonia sputi NBRC 100414 86 Gordonia Gordonia malaquae NBRC 108250 68 Gordonia Gordonia sihwensis NBRC 108236 62 Gordonia Gordonia aichiensis NBRC 108223 61 Gordonia Gordonia desulfuricans NBRC 100010 55 Gordonia Gordonia paraffinivorans NBRC 108238 54 Gordonia Gordonia rhizosphera NBRC 16068 50 Gordonia Gordonia soli NBRC 108243 47 Gordonia Gordonia amicalis NBRC 100051 = JCM 11271 # 5512 reads uniquely mapped to Gorillibacterium (multi-hits among diff. species in Gorillibacterium allowed) 4197 Gorillibacterium Gorillibacterium sp. SN4 1315 Gorillibacterium Gorillibacterium massiliense # 15808 reads uniquely mapped to Granulicatella (multi-hits among diff. species in Granulicatella allowed) 14347 Granulicatella Granulicatella adiacens ATCC 49175 1461 Granulicatella Granulicatella elegans ATCC 700633 # 133076 reads uniquely mapped to Grimontia (multi-hits among diff. species in Grimontia allowed) 126908 Grimontia Grimontia hollisae 6168 Grimontia Grimontia indica # 26058 reads uniquely mapped to Haematospirillum (multi-hits among diff. species in Haematospirillum allowed) 26058 Haematospirillum Haematospirillum jordaniae # 113178 reads uniquely mapped to Haemophilus (multi-hits among diff. species in Haemophilus allowed) 23213 Haemophilus [Haemophilus] ducreyi 19766 Haemophilus [Haemophilus] parasuis 12912 Haemophilus Haemophilus parainfluenzae T3T1 12134 Haemophilus Haemophilus sputorum CCUG 13788 12073 Haemophilus Haemophilus influenzae 7847 Haemophilus Haemophilus parasuis SH0165 4335 Haemophilus Haemophilus influenzae KR494 2975 Haemophilus Haemophilus influenzae F3047 2229 Haemophilus Haemophilus influenzae R2846 2133 Haemophilus Haemophilus ducreyi 35000HP 1919 Haemophilus NC_009566 1896 Haemophilus Haemophilus influenzae R2866 1858 Haemophilus Haemophilus influenzae CGSHiCZ412602 1665 Haemophilus Haemophilus influenzae Rd KW20 1661 Haemophilus Haemophilus influenzae 2019 1651 Haemophilus Haemophilus influenzae 86-028NP 1461 Haemophilus Haemophilus influenzae F3031 1450 Haemophilus Haemophilus influenzae 10810 # 184386 reads uniquely mapped to Hafnia (multi-hits among diff. species in Hafnia allowed) 84927 Hafnia NZ_CP014031 59606 Hafnia Hafnia alvei FB1 39853 Hafnia Hafnia alvei # 90763 reads uniquely mapped to Hahella (multi-hits among diff. species in Hahella allowed) 58809 Hahella Hahella chejuensis KCTC 2396 31954 Hahella Hahella ganghwensis DSM 17046 # 11435 reads uniquely mapped to Haliscomenobacter (multi-hits among diff. species in Haliscomenobacter allowed) 11435 Haliscomenobacter Haliscomenobacter hydrossis DSM 1100 # 8004 reads uniquely mapped to Haloferula (multi-hits among diff. species in Haloferula allowed) 8004 Haloferula Haloferula sp. BvORR071 # 100787 reads uniquely mapped to Halomonas (multi-hits among diff. species in Halomonas allowed) 18344 Halomonas Halomonas huangheensis 13531 Halomonas Halomonas smyrnensis AAD6 11203 Halomonas Halomonas zincidurans B6 9906 Halomonas Halomonas sp. HL-93 8528 Halomonas Halomonas stevensii S18214 5310 Halomonas Halomonas chromatireducens 4912 Halomonas Halomonas campaniensis 4584 Halomonas Halomonas anticariensis FP35 = DSM 16096 4016 Halomonas Halomonas sp. S2151 3975 Halomonas Halomonas sp. PR-M31 3247 Halomonas Halomonas sp. KO116 2102 Halomonas Halomonas sp. 'Soap Lake #7' 1831 Halomonas Halomonas halocynthiae DSM 14573 1709 Halomonas Halomonas salina 1526 Halomonas Halomonas sp. 1513 1375 Halomonas Halomonas sp. PBN3 1170 Halomonas Halomonas lutea DSM 23508 1158 Halomonas Halomonas xinjiangensis 853 Halomonas Halomonas boliviensis LC1 816 Halomonas Halomonas jeotgali Hwa 391 Halomonas Halomonas sp. KM-1 299 Halomonas Halomonas sp. GFAJ-1 1 Halomonas Halomonas halodenitrificans DSM 735 # 2306 reads uniquely mapped to Halothermothrix (multi-hits among diff. species in Halothermothrix allowed) 2306 Halothermothrix Halothermothrix orenii H 168 # 81445 reads uniquely mapped to Halothiobacillus (multi-hits among diff. species in Halothiobacillus allowed) 35788 Halothiobacillus Halothiobacillus sp. XI15 24848 Halothiobacillus Halothiobacillus sp. LS2 20809 Halothiobacillus Halothiobacillus neapolitanus c2 # 8290 reads uniquely mapped to Helicobacter (multi-hits among diff. species in Helicobacter allowed) 984 Helicobacter Helicobacter bizzozeronii CIII-1 629 Helicobacter Helicobacter himalayensis 548 Helicobacter Helicobacter canadensis MIT 98-5491 531 Helicobacter Helicobacter acinonychis str. Sheeba 371 Helicobacter Helicobacter pylori 369 Helicobacter Helicobacter typhlonius 336 Helicobacter Helicobacter pullorum MIT 98-5489 322 Helicobacter Helicobacter cinaedi PAGU611 280 Helicobacter Helicobacter bilis ATCC 51630 242 Helicobacter Helicobacter jaachi 235 Helicobacter Helicobacter sp. MIT 01-6451 233 Helicobacter Helicobacter bilis 213 Helicobacter Helicobacter felis ATCC 49179 175 Helicobacter Helicobacter ailurogastricus 168 Helicobacter Helicobacter canis NCTC 12740 160 Helicobacter Helicobacter cinaedi CCUG 18818 = ATCC BAA-847 155 Helicobacter Helicobacter mustelae 12198 140 Helicobacter Helicobacter muridarum 135 Helicobacter Helicobacter winghamensis ATCC BAA-430 129 Helicobacter Helicobacter apodemus 116 Helicobacter Helicobacter rodentium ATCC 700285 97 Helicobacter Helicobacter macacae MIT 99-5501 88 Helicobacter Helicobacter pametensis ATCC 51478 88 Helicobacter Helicobacter heilmannii 87 Helicobacter Helicobacter pylori UM298 86 Helicobacter Helicobacter pylori B8 84 Helicobacter Helicobacter pylori J99 80 Helicobacter Helicobacter suis HS1 78 Helicobacter Helicobacter pylori UM299 78 Helicobacter Helicobacter saguini 72 Helicobacter NZ_AP014712 70 Helicobacter Helicobacter pylori UM032 69 Helicobacter Helicobacter pylori PeCan18 60 Helicobacter Helicobacter cetorum MIT 00-7128 60 Helicobacter Helicobacter hepaticus ATCC 51449 54 Helicobacter Helicobacter sp. MIT 01-6242 41 Helicobacter Helicobacter cetorum MIT 99-5656 41 Helicobacter Helicobacter pylori F30 39 Helicobacter Helicobacter pylori oki128 31 Helicobacter Helicobacter pylori Aklavik86 29 Helicobacter Helicobacter pylori 26695 28 Helicobacter Helicobacter pylori 26695-1 25 Helicobacter Helicobacter pylori BM012S 22 Helicobacter Helicobacter pylori v225d 22 Helicobacter Helicobacter pylori India7 19 Helicobacter Helicobacter pylori BM012A 19 Helicobacter Helicobacter pylori ELS37 19 Helicobacter Helicobacter pylori 26695-1CL 18 Helicobacter Helicobacter pylori oki112 18 Helicobacter Helicobacter pylori SS1 16 Helicobacter Helicobacter pylori SouthAfrica20 16 Helicobacter Helicobacter pylori 26695-1CH 16 Helicobacter Helicobacter pylori F32 15 Helicobacter Helicobacter pylori UM037 14 Helicobacter Helicobacter pylori Rif1 14 Helicobacter Helicobacter pylori oki102 13 Helicobacter Helicobacter pylori Rif2 12 Helicobacter Helicobacter pylori oki422 11 Helicobacter Helicobacter pylori oki898 9 Helicobacter Helicobacter pylori Lithuania75 8 Helicobacter Helicobacter pylori Puno120 8 Helicobacter Helicobacter fennelliae MRY12-0050 7 Helicobacter Helicobacter trogontum 7 Helicobacter Helicobacter pylori Cuz20 7 Helicobacter Helicobacter pylori J166 6 Helicobacter Helicobacter pylori Shi169 6 Helicobacter Helicobacter pylori F57 6 Helicobacter Helicobacter pylori Shi112 6 Helicobacter Helicobacter pylori HUP-B14 6 Helicobacter Helicobacter pylori F16 5 Helicobacter Helicobacter pylori oki673 5 Helicobacter Helicobacter pylori oki828 5 Helicobacter Helicobacter pylori oki154 5 Helicobacter Helicobacter pylori P12 5 Helicobacter Helicobacter pylori Gambia94/24 4 Helicobacter Helicobacter pylori 35A 4 Helicobacter Helicobacter pylori B38 4 Helicobacter Helicobacter pylori 2017 4 Helicobacter Helicobacter pylori SNT49 4 Helicobacter Helicobacter pylori Puno135 4 Helicobacter Helicobacter pylori 51 4 Helicobacter Helicobacter pylori G27 3 Helicobacter Helicobacter pylori NY40 3 Helicobacter Helicobacter pylori 52 3 Helicobacter Helicobacter pylori Shi470 3 Helicobacter Helicobacter pylori UM066 3 Helicobacter Helicobacter pylori SJM180 3 Helicobacter Helicobacter pylori Aklavik117 3 Helicobacter Helicobacter pylori SouthAfrica7 3 Helicobacter Helicobacter pylori 83 2 Helicobacter Helicobacter pylori PMSS1 2 Helicobacter Helicobacter pylori OK113 2 Helicobacter NC_017926 2 Helicobacter Helicobacter pylori 2018 2 Helicobacter Helicobacter pylori HPAG1 2 Helicobacter Helicobacter pylori Shi417 2 Helicobacter Helicobacter sp. MIT 05-5293 1 Helicobacter Helicobacter pylori OK310 1 Helicobacter Helicobacter pylori PeCan4 1 Helicobacter Helicobacter pylori Sat464 # 61386 reads uniquely mapped to Herbaspirillum (multi-hits among diff. species in Herbaspirillum allowed) 15167 Herbaspirillum Herbaspirillum seropedicae 9669 Herbaspirillum Herbaspirillum rubrisubalbicans M1 9028 Herbaspirillum Herbaspirillum hiltneri N3 7475 Herbaspirillum Herbaspirillum seropedicae SmR1 5431 Herbaspirillum Herbaspirillum rhizosphaerae 5203 Herbaspirillum Noviherbaspirillum autotrophicum 3869 Herbaspirillum Herbaspirillum frisingense 3273 Herbaspirillum Herbaspirillum chlorophenolicum 1194 Herbaspirillum Herbaspirillum chlorophenolicum NBRC 102525 1077 Herbaspirillum Herbaspirillum autotrophicum # 24681 reads uniquely mapped to Hippea (multi-hits among diff. species in Hippea allowed) 22579 Hippea Hippea maritima DSM 10411 1316 Hippea Hippea sp. KM1 636 Hippea Hippea jasoniae 150 Hippea Hippea alviniae EP5-r # 60663 reads uniquely mapped to Histophilus (multi-hits among diff. species in Histophilus allowed) 60111 Histophilus Haemophilus somnus 129PT 552 Histophilus Haemophilus somnus 2336 # 5941 reads uniquely mapped to Holdemanella (multi-hits among diff. species in Holdemanella allowed) 5941 Holdemanella Holdemanella biformis DSM 3989 # 3660 reads uniquely mapped to Holospora (multi-hits among diff. species in Holospora allowed) 2251 Holospora Holospora undulata HU1 1409 Holospora Holospora obtusa F1 # 52976 reads uniquely mapped to Hydrogenophaga (multi-hits among diff. species in Hydrogenophaga allowed) 38107 Hydrogenophaga Hydrogenophaga sp. LPB0072 9804 Hydrogenophaga Hydrogenophaga sp. RAC07 2556 Hydrogenophaga Hydrogenophaga intermedia 2509 Hydrogenophaga Hydrogenophaga sp. PBC # 24846 reads uniquely mapped to Hymenobacter (multi-hits among diff. species in Hymenobacter allowed) 17474 Hymenobacter Hymenobacter terrenus 6411 Hymenobacter Hymenobacter sp. PAMC 26554 277 Hymenobacter Hymenobacter sp. APR13 127 Hymenobacter Hymenobacter sp. IS2118 123 Hymenobacter Hymenobacter sedentarius 118 Hymenobacter Hymenobacter sp. PAMC 26628 106 Hymenobacter Hymenobacter swuensis DY53 91 Hymenobacter Hymenobacter sp. DG25B 77 Hymenobacter Hymenobacter sp. DG25A 40 Hymenobacter Hymenobacter sp. AT01-02 2 Hymenobacter Hymenobacter norwichensis DSM 15439 # 30172 reads uniquely mapped to Hyphomicrobium (multi-hits among diff. species in Hyphomicrobium allowed) 18808 Hyphomicrobium Hyphomicrobium nitrativorans NL23 5794 Hyphomicrobium Hyphomicrobium zavarzinii ATCC 27496 1425 Hyphomicrobium Hyphomicrobium sp. 99 1419 Hyphomicrobium Hyphomicrobium denitrificans ATCC 51888 1366 Hyphomicrobium Hyphomicrobium sp. MC1 1360 Hyphomicrobium Hyphomicrobium denitrificans 1NES1 # 46580 reads uniquely mapped to Ideonella (multi-hits among diff. species in Ideonella allowed) 26915 Ideonella Ideonella sp. B508-1 19665 Ideonella Ideonella sakaiensis # 127922 reads uniquely mapped to Idiomarina (multi-hits among diff. species in Idiomarina allowed) 33628 Idiomarina Idiomarina baltica OS145 31871 Idiomarina Idiomarina sp. A28L 15901 Idiomarina Idiomarina zobellii 11615 Idiomarina Idiomarina loihiensis GSL 199 11583 Idiomarina Idiomarina loihiensis L2TR 8047 Idiomarina Idiomarina atlantica 5750 Idiomarina Idiomarina xiamenensis 10-D-4 5411 Idiomarina Idiomarina salinarum 3704 Idiomarina Idiomarina woesei 412 Idiomarina Idiomarina sediminum DSM 21906 # 51979 reads uniquely mapped to Immundisolibacter (multi-hits among diff. species in Immundisolibacter allowed) 51979 Immundisolibacter Immundisolibacter cernigliae # 16438 reads uniquely mapped to Inquilinus (multi-hits among diff. species in Inquilinus allowed) 16438 Inquilinus Inquilinus limosus DSM 16000 # 60561 reads uniquely mapped to Janthinobacterium (multi-hits among diff. species in Janthinobacterium allowed) 20405 Janthinobacterium Janthinobacterium sp. B9-8 16080 Janthinobacterium Janthinobacterium sp. HH01 9341 Janthinobacterium Janthinobacterium sp. 1_2014MBL_MicDiv 9295 Janthinobacterium Janthinobacterium sp. LM6 2124 Janthinobacterium Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 1708 Janthinobacterium Janthinobacterium sp. Marseille 1608 Janthinobacterium Janthinobacterium sp. CG3 # 24435 reads uniquely mapped to Jeotgalibacillus (multi-hits among diff. species in Jeotgalibacillus allowed) 19015 Jeotgalibacillus Jeotgalibacillus malaysiensis 5026 Jeotgalibacillus Jeotgalibacillus campisalis 394 Jeotgalibacillus Jeotgalibacillus soli Cunha et al. 2012 # 46882 reads uniquely mapped to Jiangella (multi-hits among diff. species in Jiangella allowed) 45949 Jiangella Jiangella alkaliphila 486 Jiangella Jiangella muralis 447 Jiangella Jiangella gansuensis DSM 44835 # 3304 reads uniquely mapped to Jonquetella (multi-hits among diff. species in Jonquetella allowed) 3304 Jonquetella Jonquetella anthropi DSM 22815 # 4635 reads uniquely mapped to Kamptonema (multi-hits among diff. species in Kamptonema allowed) 4635 Kamptonema Kamptonema formosum PCC 6407 # 79589 reads uniquely mapped to Kangiella (multi-hits among diff. species in Kangiella allowed) 38580 Kangiella Kangiella koreensis DSM 16069 22488 Kangiella Kangiella sediminilitoris 18521 Kangiella Kangiella geojedonensis # 2275 reads uniquely mapped to Kineosphaera (multi-hits among diff. species in Kineosphaera allowed) 2275 Kineosphaera Kineosphaera limosa NBRC 100340 # 236012 reads uniquely mapped to Klebsiella (multi-hits among diff. species in Klebsiella allowed) 104438 Klebsiella Klebsiella pneumoniae 23113 Klebsiella Klebsiella michiganensis 20442 Klebsiella Klebsiella oxytoca 17790 Klebsiella Klebsiella pneumoniae subsp. pneumoniae 6283 Klebsiella Klebsiella variicola 6261 Klebsiella Klebsiella aerogenes 3729 Klebsiella Klebsiella oxytoca KONIH1 3606 Klebsiella Klebsiella sp. RIT-PI-d 3225 Klebsiella Klebsiella sp. LTGPAF-6F 2656 Klebsiella Klebsiella michiganensis E718 2070 Klebsiella Klebsiella michiganensis HKOPL1 2061 Klebsiella Klebsiella variicola At-22 1748 Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH27 1725 Klebsiella Klebsiella pneumoniae KP-1 1618 Klebsiella Klebsiella michiganensis KCTC 1686 1576 Klebsiella Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 1511 Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH24 1494 Klebsiella Klebsiella pneumoniae 30660/NJST258_1 1488 Klebsiella Klebsiella pneumoniae subsp. pneumoniae HS11286 1482 Klebsiella Klebsiella aerogenes KCTC 2190 1462 Klebsiella Klebsiella pneumoniae subsp. pneumoniae 1158 1458 Klebsiella Klebsiella quasipneumoniae 1456 Klebsiella Klebsiella pneumoniae KCTC 2242 1450 Klebsiella Klebsiella pneumoniae HK787 1422 Klebsiella Klebsiella pneumoniae subsp. pneumoniae Kp13 1417 Klebsiella Klebsiella pneumoniae UHKPC33 1414 Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPR0928 1409 Klebsiella Klebsiella pneumoniae UHKPC07 1404 Klebsiella Klebsiella pneumoniae JM45 1398 Klebsiella Klebsiella pneumoniae 500_1420 1384 Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH1 1358 Klebsiella Klebsiella pneumoniae 30684/NJST258_2 1356 Klebsiella Klebsiella pneumoniae DMC1097 1351 Klebsiella Klebsiella pneumoniae subsp. pneumoniae KPNIH10 1312 Klebsiella Klebsiella pneumoniae CG43 1273 Klebsiella Klebsiella aerogenes EA1509E 1238 Klebsiella Klebsiella pneumoniae subsp. pneumoniae MGH 78578 1181 Klebsiella Klebsiella pneumoniae subsp. pneumoniae PittNDM01 1051 Klebsiella Klebsiella pneumoniae subsp. pneumoniae 1084 994 Klebsiella Klebsiella pneumoniae 342 908 Klebsiella NZ_CP017480 # 239393 reads uniquely mapped to Kluyvera (multi-hits among diff. species in Kluyvera allowed) 147197 Kluyvera Kluyvera intermedia 64481 Kluyvera Kluyvera ascorbata ATCC 33433 27715 Kluyvera Kluyvera cryocrescens NBRC 102467 # 22884 reads uniquely mapped to Knoellia (multi-hits among diff. species in Knoellia allowed) 21176 Knoellia Knoellia aerolata DSM 18566 928 Knoellia Knoellia flava TL1 404 Knoellia Knoellia sp. Soil729 265 Knoellia Knoellia sinensis KCTC 19936 111 Knoellia Knoellia subterranea KCTC 19937 # 2996 reads uniquely mapped to Kocuria (multi-hits among diff. species in Kocuria allowed) 923 Kocuria Kocuria kristinae 384 Kocuria Kocuria palustris 378 Kocuria Kocuria flava 341 Kocuria Kocuria rhizophila DC2201 276 Kocuria Kocuria turfanensis 208 Kocuria Kocuria sp. ZOR0020 191 Kocuria Kocuria polaris 167 Kocuria Kocuria marina 128 Kocuria Kocuria salsicia # 237526 reads uniquely mapped to Kosakonia (multi-hits among diff. species in Kosakonia allowed) 65699 Kosakonia Kosakonia sacchari 59326 Kosakonia Kosakonia sacchari SP1 45827 Kosakonia Kosakonia radicincitans 35254 Kosakonia Kosakonia cowanii 31420 Kosakonia Kosakonia oryzae # 23350 reads uniquely mapped to Kurthia (multi-hits among diff. species in Kurthia allowed) 15003 Kurthia Kurthia sp. 11kri321 7145 Kurthia Kurthia huakuii LAM0618 740 Kurthia Kurthia massiliensis 462 Kurthia Kurthia senegalensis # 9290 reads uniquely mapped to Lachnoclostridium (multi-hits among diff. species in Lachnoclostridium allowed) 3990 Lachnoclostridium [Clostridium] saccharolyticum WM1 2341 Lachnoclostridium [Clostridium] celerecrescens 1139 Lachnoclostridium Lachnoclostridium phocaeense 521 Lachnoclostridium [Clostridium] scindens ATCC 35704 405 Lachnoclostridium NZ_CP015399 249 Lachnoclostridium Lachnoclostridium phytofermentans ISDg 125 Lachnoclostridium Faecalicatena contorta 120 Lachnoclostridium [Clostridium asparagiforme] DSM 15981 104 Lachnoclostridium Faecalicatena fissicatena 95 Lachnoclostridium [Clostridium] bolteae 90A9 88 Lachnoclostridium [Clostridium] citroniae WAL-17108 81 Lachnoclostridium [Clostridium] symbiosum WAL-14163 32 Lachnoclostridium [Clostridium] glycyrrhizinilyticum JCM 13369 # 87061 reads uniquely mapped to Lacimicrobium (multi-hits among diff. species in Lacimicrobium allowed) 87061 Lacimicrobium Lacimicrobium alkaliphilum # 1218 reads uniquely mapped to Lacinutrix (multi-hits among diff. species in Lacinutrix allowed) 377 Lacinutrix Lacinutrix sp. Hel_I_90 258 Lacinutrix Lacinutrix sp. 5H-3-7-4 244 Lacinutrix Lacinutrix venerupis 239 Lacinutrix Lacinutrix jangbogonensis 52 Lacinutrix Lacinutrix mariniflava 48 Lacinutrix Lacinutrix himadriensis # 82256 reads uniquely mapped to Lactobacillus (multi-hits among diff. species in Lactobacillus allowed) 30790 Lactobacillus Lactobacillus selangorensis 18344 Lactobacillus Lactobacillus vaginalis DSM 5837 = ATCC 49540 3938 Lactobacillus Lactobacillus lindneri 2210 Lactobacillus Lactobacillus crispatus ST1 1285 Lactobacillus Lactobacillus acetotolerans 1142 Lactobacillus Lactobacillus sp. WiKim39 969 Lactobacillus Lactobacillus delbrueckii subsp. bulgaricus 932 Lactobacillus Lactobacillus saerimneri DSM 16049 916 Lactobacillus Lactobacillus amylophilus DSM 20533 = JCM 1125 888 Lactobacillus Lactobacillus senioris DSM 24302 = JCM 17472 792 Lactobacillus Lactobacillus delbrueckii subsp. lactis 741 Lactobacillus Lactobacillus ginsenosidimutans 708 Lactobacillus Lactobacillus paracollinoides 696 Lactobacillus Lactobacillus sanfranciscensis TMW 1.1304 600 Lactobacillus Lactobacillus hokkaidonensis JCM 18461 575 Lactobacillus Lactobacillus fermentum 540 Lactobacillus Lactobacillus ruminis ATCC 27782 530 Lactobacillus Lactobacillus helveticus 512 Lactobacillus Lactobacillus brevis 487 Lactobacillus Lactobacillus curvatus 418 Lactobacillus Lactobacillus mucosae LM1 397 Lactobacillus Lactobacillus versmoldensis DSM 14857 = KCTC 3814 372 Lactobacillus Lactobacillus delbrueckii subsp. bulgaricus ND02 357 Lactobacillus Lactobacillus delbrueckii subsp. bulgaricus 2038 349 Lactobacillus Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 340 Lactobacillus Lactobacillus delbrueckii subsp. sunkii 339 Lactobacillus Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 332 Lactobacillus Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 331 Lactobacillus Lactobacillus fermentum 3872 326 Lactobacillus Lactobacillus delbrueckii subsp. delbrueckii 318 Lactobacillus Lactobacillus paracasei 317 Lactobacillus Lactobacillus delbrueckii subsp. indicus 310 Lactobacillus Lactobacillus fermentum IFO 3956 301 Lactobacillus Lactobacillus fermentum F-6 294 Lactobacillus Lactobacillus fermentum CECT 5716 274 Lactobacillus Lactobacillus curieae 223 Lactobacillus Lactobacillus plantarum 212 Lactobacillus Lactobacillus buchneri CD034 212 Lactobacillus Lactobacillus tucceti DSM 20183 188 Lactobacillus Lactobacillus parabuchneri 180 Lactobacillus Lactobacillus alimentarius DSM 20249 180 Lactobacillus Lactobacillus floricola DSM 23037 = JCM 16512 176 Lactobacillus Lactobacillus rhamnosus 174 Lactobacillus Lactobacillus amylotrophicus DSM 20534 172 Lactobacillus Lactobacillus rhamnosus GG 163 Lactobacillus Lactobacillus ingluviei str. Autruche 4 163 Lactobacillus Lactobacillus sp. wkB8 162 Lactobacillus Lactobacillus coleohominis 101-4-CHN 162 Lactobacillus Lactobacillus rennini DSM 20253 159 Lactobacillus Lactobacillus buchneri NRRL B-30929 155 Lactobacillus Lactobacillus brevis KB290 152 Lactobacillus Lactobacillus sakei subsp. sakei 23K 149 Lactobacillus Lactobacillus acidipiscis 148 Lactobacillus Lactobacillus kunkeei 133 Lactobacillus Lactobacillus amylovorus 130 Lactobacillus Lactobacillus pobuzihii E100301 = KCTC 13174 126 Lactobacillus Lactobacillus reuteri 125 Lactobacillus Lactobacillus helveticus H9 121 Lactobacillus Lactobacillus manihotivorans DSM 13343 = JCM 12514 118 Lactobacillus Lactobacillus dextrinicus DSM 20335 111 Lactobacillus Lactobacillus concavus DSM 17758 107 Lactobacillus Lactobacillus paracasei subsp. paracasei 8700:2 106 Lactobacillus Lactobacillus algidus DSM 15638 103 Lactobacillus Lactobacillus helveticus DPC 4571 99 Lactobacillus Lactobacillus helveticus CNRZ32 91 Lactobacillus Lactobacillus casei LOCK919 90 Lactobacillus Lactobacillus casei BL23 89 Lactobacillus Lactobacillus casei LC2W 88 Lactobacillus Lactobacillus rhamnosus LOCK900 87 Lactobacillus Lactobacillus casei str. Zhang 87 Lactobacillus Lactobacillus casei BD-II 87 Lactobacillus Lactobacillus casei 12A 85 Lactobacillus Lactobacillus casei subsp. casei ATCC 393 84 Lactobacillus Lactobacillus casei W56 82 Lactobacillus Lactobacillus paracasei ATCC 334 82 Lactobacillus Lactobacillus rhamnosus Lc 705 81 Lactobacillus Lactobacillus mellifer 80 Lactobacillus Lactobacillus rhamnosus ATCC 8530 78 Lactobacillus Lactobacillus reuteri DSM 20016 76 Lactobacillus Lactobacillus equi DSM 15833 = JCM 10991 75 Lactobacillus Lactobacillus apis 74 Lactobacillus Lactobacillus paracasei N1115 72 Lactobacillus Lactobacillus rhamnosus LOCK908 71 Lactobacillus Lactobacillus nasuensis JCM 17158 71 Lactobacillus Lactobacillus animalis KCTC 3501 = DSM 20602 67 Lactobacillus Lactobacillus reuteri JCM 1112 67 Lactobacillus Lactobacillus salivarius 66 Lactobacillus NZ_CP015408 66 Lactobacillus Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 65 Lactobacillus Lactobacillus paracasei subsp. paracasei JCM 8130 63 Lactobacillus Lactobacillus fuchuensis DSM 14340 = JCM 11249 61 Lactobacillus Lactobacillus diolivorans DSM 14421 60 Lactobacillus Lactobacillus reuteri TD1 60 Lactobacillus Lactobacillus helveticus R0052 59 Lactobacillus Lactobacillus reuteri I5007 58 Lactobacillus Lactobacillus acidophilus NCFM 57 Lactobacillus Lactobacillus rapi DSM 19907 = JCM 15042 56 Lactobacillus Lactobacillus gasseri ATCC 33323 = JCM 1131 56 Lactobacillus Lactobacillus nagelii DSM 13675 55 Lactobacillus Lactobacillus farraginis DSM 18382 = JCM 14108 54 Lactobacillus Lactobacillus koreensis 53 Lactobacillus Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 53 Lactobacillus Lactobacillus backii 53 Lactobacillus Lactobacillus reuteri SD2112 50 Lactobacillus Lactobacillus helveticus H10 50 Lactobacillus Lactobacillus johnsonii 47 Lactobacillus Lactobacillus acidophilus La-14 47 Lactobacillus Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106 44 Lactobacillus Lactobacillus brevis ATCC 367 43 Lactobacillus Lactobacillus acidophilus 42 Lactobacillus Lactobacillus saniviri JCM 17471 = DSM 24301 40 Lactobacillus Lactobacillus hilgardii DSM 20176 = ATCC 8290 40 Lactobacillus Lactobacillus aviarius subsp. aviarius DSM 20655 40 Lactobacillus Lactobacillus camelliae DSM 22697 = JCM 13995 39 Lactobacillus Lactobacillus oryzae JCM 18671 39 Lactobacillus Lactobacillus acidipiscis KCTC 13900 38 Lactobacillus Lactobacillus mellis 38 Lactobacillus Lactobacillus iners DSM 13335 37 Lactobacillus Lactobacillus psittaci DSM 15354 35 Lactobacillus Lactobacillus brantae DSM 23927 33 Lactobacillus Lactobacillus amylolyticus 33 Lactobacillus Lactobacillus ozensis DSM 23829 = JCM 17196 32 Lactobacillus Lactobacillus amylovorus GRL1118 31 Lactobacillus Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 31 Lactobacillus Lactobacillus apinorum 31 Lactobacillus Lactobacillus florum DSM 22689 = JCM 16035 31 Lactobacillus Lactobacillus crustorum 31 Lactobacillus Lactobacillus salivarius str. Ren 30 Lactobacillus Lactobacillus malefermentans DSM 5705 = KCTC 3548 30 Lactobacillus Lactobacillus salivarius CECT 5713 29 Lactobacillus Lactobacillus johnsonii N6.2 29 Lactobacillus Lactobacillus thailandensis DSM 22698 = JCM 13996 29 Lactobacillus Lactobacillus bifermentans DSM 20003 28 Lactobacillus Lactobacillus johnsonii NCC 533 28 Lactobacillus Lactobacillus salivarius UCC118 28 Lactobacillus Lactobacillus kullabergensis 28 Lactobacillus Lactobacillus shenzhenensis LY-73 28 Lactobacillus Lactobacillus similis DSM 23365 = JCM 2765 27 Lactobacillus Lactobacillus heilongjiangensis 27 Lactobacillus Lactobacillus gallinarum 27 Lactobacillus Lactobacillus perolens DSM 12744 27 Lactobacillus Lactobacillus siliginis 27 Lactobacillus Lactobacillus farciminis KCTC 3681 = DSM 20184 26 Lactobacillus Lactobacillus wasatchensis 25 Lactobacillus NZ_BBEQ01000085 24 Lactobacillus Lactobacillus spicheri DSM 15429 24 Lactobacillus Lactobacillus suebicus DSM 5007 = KCTC 3549 23 Lactobacillus Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85 21 Lactobacillus Lactobacillus kimchicus JCM 15530 21 Lactobacillus Lactobacillus fructivorans KCTC 3543 = DSM 20203 21 Lactobacillus Lactobacillus graminis DSM 20719 21 Lactobacillus Lactobacillus parafarraginis DSM 18390 = JCM 14109 20 Lactobacillus Lactobacillus jensenii 20 Lactobacillus Lactobacillus johnsonii FI9785 20 Lactobacillus Lactobacillus rossiae DSM 15814 19 Lactobacillus Lactobacillus oligofermentans DSM 15707 = LMG 22743 19 Lactobacillus Lactobacillus kefiranofaciens ZW3 19 Lactobacillus Lactobacillus amylolyticus DSM 11664 18 Lactobacillus Lactobacillus odoratitofui DSM 19909 = JCM 15043 17 Lactobacillus Lactobacillus sharpeae JCM 1186 = DSM 20505 17 Lactobacillus Lactobacillus paralimentarius DSM 13961 = JCM 10707 17 Lactobacillus Lactobacillus oeni DSM 19972 17 Lactobacillus Lactobacillus harbinensis DSM 16991 17 Lactobacillus Lactobacillus plantarum subsp. plantarum 16 Lactobacillus Lactobacillus acidifarinae DSM 19394 16 Lactobacillus Lactobacillus vaccinostercus DSM 20634 15 Lactobacillus Lactobacillus plantarum JDM1 15 Lactobacillus Lactobacillus plantarum DOMLa 15 Lactobacillus Lactobacillus plantarum subsp. plantarum ST-III 15 Lactobacillus Lactobacillus plantarum 16 14 Lactobacillus Lactobacillus kimchiensis 13 Lactobacillus Lactobacillus vini DSM 20605 13 Lactobacillus Lactobacillus satsumensis DSM 16230 = JCM 12392 13 Lactobacillus Lactobacillus plantarum subsp. plantarum P-8 13 Lactobacillus Lactobacillus plantarum WCFS1 12 Lactobacillus Lactobacillus plantarum ZJ316 12 Lactobacillus Lactobacillus paucivorans 12 Lactobacillus Lactobacillus cacaonum DSM 21116 12 Lactobacillus Lactobacillus ceti DSM 22408 11 Lactobacillus Lactobacillus intestinalis DSM 6629 10 Lactobacillus Lactobacillus panis DSM 6035 9 Lactobacillus Lactobacillus hordei DSM 19519 9 Lactobacillus Lactobacillus johnsonii DPC 6026 8 Lactobacillus Lactobacillus composti DSM 18527 = JCM 14202 8 Lactobacillus Lactobacillus gastricus DSM 16045 8 Lactobacillus Lactobacillus ghanensis DSM 18630 7 Lactobacillus Lactobacillus hayakitensis DSM 18933 = JCM 14209 7 Lactobacillus Lactobacillus secaliphilus 7 Lactobacillus Lactobacillus mindensis DSM 14500 7 Lactobacillus Lactobacillus kalixensis DSM 16043 6 Lactobacillus Lactobacillus equigenerosi DSM 18793 = JCM 14505 5 Lactobacillus Lactobacillus herbarum 5 Lactobacillus Lactobacillus uvarum DSM 19971 4 Lactobacillus Lactobacillus agilis DSM 20509 4 Lactobacillus Lactobacillus hamsteri DSM 5661 = JCM 6256 4 Lactobacillus Lactobacillus antri DSM 16041 3 Lactobacillus Lactobacillus hominis DSM 23910 = CRBIP 24.179 3 Lactobacillus Lactobacillus aquaticus DSM 21051 3 Lactobacillus Lactobacillus pontis DSM 8475 3 Lactobacillus Lactobacillus sucicola DSM 21376 = JCM 15457 3 Lactobacillus Lactobacillus frumenti DSM 13145 2 Lactobacillus NZ_BBEQ01000098 2 Lactobacillus Lactobacillus paraplantarum 2 Lactobacillus Lactobacillus capillatus DSM 19910 1 Lactobacillus Lactobacillus xiangfangensis 1 Lactobacillus Lactobacillus fabifermentans DSM 21115 # 22987 reads uniquely mapped to Lactococcus (multi-hits among diff. species in Lactococcus allowed) 2647 Lactococcus Lactococcus garvieae Lg2 2588 Lactococcus Lactococcus garvieae ATCC 49156 2364 Lactococcus Lactococcus lactis subsp. lactis 1560 Lactococcus Lactococcus lactis subsp. cremoris UC509.9 1258 Lactococcus Lactococcus lactis subsp. cremoris NZ9000 1232 Lactococcus Lactococcus lactis subsp. lactis IO-1 1204 Lactococcus Lactococcus lactis subsp. lactis CV56 1203 Lactococcus Lactococcus lactis subsp. lactis Il1403 1198 Lactococcus Lactococcus lactis subsp. cremoris SK11 1195 Lactococcus Lactococcus lactis subsp. lactis KF147 1179 Lactococcus Lactococcus lactis subsp. lactis NCDO 2118 1168 Lactococcus Lactococcus lactis subsp. cremoris MG1363 1166 Lactococcus Lactococcus lactis subsp. lactis KLDS 4.0325 1152 Lactococcus Lactococcus lactis subsp. cremoris KW2 1124 Lactococcus Lactococcus lactis 719 Lactococcus Lactococcus piscium MKFS47 30 Lactococcus Lactococcus lactis subsp. cremoris A76 # 135907 reads uniquely mapped to Lamprocystis (multi-hits among diff. species in Lamprocystis allowed) 135907 Lamprocystis Lamprocystis purpurea DSM 4197 # 3630 reads uniquely mapped to Lawsonella (multi-hits among diff. species in Lawsonella allowed) 3630 Lawsonella Lawsonella clevelandensis # 216856 reads uniquely mapped to Leclercia (multi-hits among diff. species in Leclercia allowed) 172267 Leclercia Leclercia adecarboxylata 44589 Leclercia Leclercia adecarboxylata ATCC 23216 = NBRC 102595 # 84551 reads uniquely mapped to Legionella (multi-hits among diff. species in Legionella allowed) 20151 Legionella Legionella geestiana 13229 Legionella Legionella pneumophila 6259 Legionella Legionella hackeliae 6049 Legionella Legionella spiritensis 4290 Legionella Legionella israelensis 3870 Legionella Legionella lansingensis DSM 19556 = ATCC 49751 3664 Legionella Legionella pneumophila subsp. pneumophila 2279 Legionella Legionella fallonii LLAP-10 1887 Legionella Legionella rubrilucens 1756 Legionella Legionella londiniensis 1718 Legionella Legionella tucsonensis 1584 Legionella Legionella longbeachae 1531 Legionella Legionella norrlandica 1519 Legionella Legionella brunensis 1504 Legionella Legionella jamestowniensis 1444 Legionella Legionella saoudiensis 1110 Legionella Legionella birminghamensis 1086 Legionella Legionella massiliensis 1055 Legionella Legionella jordanis 950 Legionella Legionella pneumophila subsp. fraseri 893 Legionella Legionella longbeachae NSW150 747 Legionella Legionella pneumophila subsp. pascullei 569 Legionella Legionella quinlivanii 514 Legionella Legionella pneumophila subsp. pneumophila LPE509 470 Legionella Legionella cherrii 431 Legionella Legionella waltersii 384 Legionella Legionella pneumophila str. Lens 384 Legionella Legionella pneumophila str. Paris 346 Legionella Legionella nautarum 330 Legionella Legionella pneumophila 2300/99 Alcoy 325 Legionella Legionella oakridgensis ATCC 33761 = DSM 21215 315 Legionella Legionella pneumophila subsp. pneumophila str. Philadelphia 1 307 Legionella Legionella pneumophila subsp. pneumophila ATCC 43290 301 Legionella Legionella pneumophila str. Corby 280 Legionella Legionella wadsworthii DSM 21896 = ATCC 33877 276 Legionella Legionella drancourtii LLAP12 247 Legionella Legionella adelaidensis 173 Legionella Legionella worsleiensis 125 Legionella Legionella fairfieldensis ATCC 49588 118 Legionella Legionella tunisiensis 81 Legionella Legionella moravica DSM 19234 # 12070 reads uniquely mapped to Leisingera (multi-hits among diff. species in Leisingera allowed) 5825 Leisingera Leisingera methylohalidivorans DSM 14336 4815 Leisingera Leisingera daeponensis DSM 23529 1430 Leisingera Leisingera aquaemixtae # 218378 reads uniquely mapped to Lelliottia (multi-hits among diff. species in Lelliottia allowed) 218378 Lelliottia NZ_CP015774 # 17818 reads uniquely mapped to Leptolyngbya (multi-hits among diff. species in Leptolyngbya allowed) 9164 Leptolyngbya Leptolyngbya sp. O-77 3086 Leptolyngbya Leptolyngbya boryana PCC 6306 1594 Leptolyngbya Leptolyngbya sp. NIES-3755 1433 Leptolyngbya Leptolyngbya sp. PCC 7376 970 Leptolyngbya Leptolyngbya sp. KIOST-1 701 Leptolyngbya Leptolyngbya valderiana BDU 20041 664 Leptolyngbya Leptolyngbya sp. PCC 6406 166 Leptolyngbya Leptolyngbya sp. PCC 7375 40 Leptolyngbya Leptolyngbya sp. Heron Island J # 42216 reads uniquely mapped to Leptothrix (multi-hits among diff. species in Leptothrix allowed) 42216 Leptothrix Leptothrix cholodnii SP-6 # 2991 reads uniquely mapped to Leptotrichia (multi-hits among diff. species in Leptotrichia allowed) 1124 Leptotrichia Leptotrichia sp. oral taxon 212 807 Leptotrichia Leptotrichia buccalis C-1013-b 596 Leptotrichia Leptotrichia sp. oral taxon 847 423 Leptotrichia Leptotrichia goodfellowii DSM 19756 29 Leptotrichia Leptotrichia wadei DSM 19758 12 Leptotrichia Leptotrichia shahii DSM 19757 # 22868 reads uniquely mapped to Liberibacter (multi-hits among diff. species in Liberibacter allowed) 3194 Liberibacter Candidatus Liberibacter asiaticus 3184 Liberibacter Candidatus Liberibacter asiaticus str. psy62 3159 Liberibacter Candidatus Liberibacter asiaticus str. Ishi-1 2747 Liberibacter Liberibacter crescens 2742 Liberibacter Candidatus Liberibacter asiaticus str. gxpsy 2532 Liberibacter Candidatus Liberibacter africanus PTSAPSY 2164 Liberibacter Liberibacter crescens BT-1 1881 Liberibacter Candidatus Liberibacter solanacearum CLso-ZC1 1265 Liberibacter Candidatus Liberibacter americanus str. Sao Paulo # 5465 reads uniquely mapped to Limnochorda (multi-hits among diff. species in Limnochorda allowed) 5465 Limnochorda Limnochorda pilosa # 54898 reads uniquely mapped to Limnohabitans (multi-hits among diff. species in Limnohabitans allowed) 28788 Limnohabitans Limnohabitans sp. 63ED37-2 21436 Limnohabitans Limnohabitans sp. 103DPR2 4674 Limnohabitans Limnohabitans planktonicus II-D5 # 172152 reads uniquely mapped to Lonsdalea (multi-hits among diff. species in Lonsdalea allowed) 172152 Lonsdalea Lonsdalea quercina subsp. quercina # 89612 reads uniquely mapped to Luminiphilus (multi-hits among diff. species in Luminiphilus allowed) 89612 Luminiphilus Luminiphilus syltensis NOR5-1B # 39518 reads uniquely mapped to Lyngbya (multi-hits among diff. species in Lyngbya allowed) 34653 Lyngbya Lyngbya confervoides BDU141951 4865 Lyngbya Lyngbya aestuarii BL J # 14819 reads uniquely mapped to Magnetospirillum (multi-hits among diff. species in Magnetospirillum allowed) 10574 Magnetospirillum Magnetospirillum gryphiswaldense MSR-1 v2 3343 Magnetospirillum Magnetospirillum sp. XM-1 514 Magnetospirillum Magnetospirillum magneticum AMB-1 388 Magnetospirillum Magnetospirillum caucaseum # 208788 reads uniquely mapped to Mangrovibacter (multi-hits among diff. species in Mangrovibacter allowed) 208788 Mangrovibacter Mangrovibacter sp. MFB070 # 98698 reads uniquely mapped to Mannheimia (multi-hits among diff. species in Mannheimia allowed) 14973 Mannheimia Mannheimia varigena USDA-ARS-USMARC-1312 14297 Mannheimia Mannheimia varigena USDA-ARS-USMARC-1296 13172 Mannheimia Mannheimia varigena USDA-ARS-USMARC-1388 12676 Mannheimia Mannheimia haemolytica USDA-ARS-USMARC-184 8264 Mannheimia Mannheimia haemolytica 7562 Mannheimia Mannheimia sp. USDA-ARS-USMARC-1261 6037 Mannheimia Mannheimia haemolytica D171 4148 Mannheimia Mannheimia haemolytica USDA-ARS-USMARC-183 3944 Mannheimia Mannheimia haemolytica D153 3483 Mannheimia Mannheimia haemolytica USDA-ARS-USMARC-185 3436 Mannheimia Mannheimia haemolytica M42548 3423 Mannheimia Mannheimia haemolytica USMARC_2286 3283 Mannheimia Mannheimia haemolytica D174 # 65436 reads uniquely mapped to Marinagarivorans (multi-hits among diff. species in Marinagarivorans allowed) 65436 Marinagarivorans Marinagarivorans algicola # 2792 reads uniquely mapped to Marinifilum (multi-hits among diff. species in Marinifilum allowed) 2792 Marinifilum Marinifilum fragile JCM 15579 # 78886 reads uniquely mapped to Marinimicrobium (multi-hits among diff. species in Marinimicrobium allowed) 62292 Marinimicrobium Marinimicrobium agarilyticum DSM 16975 16594 Marinimicrobium Marinimicrobium sp. LS-A18 # 93714 reads uniquely mapped to Marinobacter (multi-hits among diff. species in Marinobacter allowed) 24144 Marinobacter Marinobacter salinus 9423 Marinobacter Marinobacter excellens HL-55 9017 Marinobacter Marinobacter sp. LQ44 7249 Marinobacter Marinobacter santoriniensis NKSG1 5261 Marinobacter Marinobacter nanhaiticus D15-8W 5057 Marinobacter Marinobacter nitratireducens 4760 Marinobacter Marinobacter hydrocarbonoclasticus VT8 4668 Marinobacter Marinobacter hydrocarbonoclasticus ATCC 49840 4408 Marinobacter NZ_CP007151 4027 Marinobacter Marinobacter sp. BSs20148 3906 Marinobacter Marinobacter psychrophilus 3300 Marinobacter Marinobacter salarius 1942 Marinobacter Marinobacter sp. ES-1 1629 Marinobacter Marinobacter sp. CP1 1614 Marinobacter Marinobacter adhaerens HP15 1505 Marinobacter Marinobacter subterrani 1327 Marinobacter Marinobacter daepoensis DSM 16072 477 Marinobacter Marinobacter lipolyticus SM19 # 109976 reads uniquely mapped to Marinobacterium (multi-hits among diff. species in Marinobacterium allowed) 43798 Marinobacterium Marinobacterium sp. ST58-10 26968 Marinobacterium Marinobacterium stanieri S30 23626 Marinobacterium Marinobacterium sp. AK27 12094 Marinobacterium Marinobacterium litorale DSM 23545 3488 Marinobacterium Marinobacterium rhizophilum DSM 18822 2 Marinobacterium Marinobacterium jannaschii DSM 6295 # 109123 reads uniquely mapped to Marinomonas (multi-hits among diff. species in Marinomonas allowed) 40612 Marinomonas Marinomonas posidonica IVIA-Po-181 16902 Marinomonas Marinomonas fungiae 16894 Marinomonas Marinomonas mediterranea MMB-1 13638 Marinomonas Marinomonas sp. MED121 12940 Marinomonas Marinomonas sp. MWYL1 4429 Marinomonas Marinomonas ushuaiensis DSM 15871 2784 Marinomonas Marinomonas profundimaris 924 Marinomonas Marinomonas polaris DSM 16579 # 72795 reads uniquely mapped to Marinospirillum (multi-hits among diff. species in Marinospirillum allowed) 63072 Marinospirillum Marinospirillum minutulum DSM 6287 9723 Marinospirillum Marinospirillum insulare DSM 21763 # 2382 reads uniquely mapped to Marmoricola (multi-hits among diff. species in Marmoricola allowed) 815 Marmoricola Marmoricola sp. Leaf446 790 Marmoricola Marmoricola sp. URHB0036 777 Marmoricola Marmoricola aequoreus # 72031 reads uniquely mapped to Massilia (multi-hits among diff. species in Massilia allowed) 20092 Massilia Massilia sp. NR 4-1 15711 Massilia Massilia sp. 9096 13254 Massilia Massilia timonae 11557 Massilia Massilia putida 9614 Massilia Massilia sp. WG5 1731 Massilia Massilia sp. Leaf139 72 Massilia Massilia niastensis DSM 21313 # 4901 reads uniquely mapped to Mastigocladopsis (multi-hits among diff. species in Mastigocladopsis allowed) 4901 Mastigocladopsis Mastigocladopsis repens PCC 10914 # 57 reads uniquely mapped to Mastigocladus (multi-hits among diff. species in Mastigocladus allowed) 57 Mastigocladus Mastigocladus laminosus UU774 # 1059 reads uniquely mapped to Mastigocoleus (multi-hits among diff. species in Mastigocoleus allowed) 1059 Mastigocoleus Mastigocoleus testarum BC008 # 8579 reads uniquely mapped to Meiothermus (multi-hits among diff. species in Meiothermus allowed) 5994 Meiothermus Meiothermus silvanus DSM 9946 1524 Meiothermus Meiothermus ruber DSM 1279 367 Meiothermus Meiothermus chliarophilus DSM 9957 335 Meiothermus Meiothermus rufus DSM 22234 181 Meiothermus Meiothermus timidus DSM 17022 178 Meiothermus Meiothermus cerbereus DSM 11376 # 11754 reads uniquely mapped to Methylacidiphilum (multi-hits among diff. species in Methylacidiphilum allowed) 4201 Methylacidiphilum Methylacidiphilum kamchatkense Kam1 4107 Methylacidiphilum Methylacidiphilum fumariolicum SolV 3446 Methylacidiphilum Methylacidiphilum infernorum V4 # 44195 reads uniquely mapped to Methylibium (multi-hits among diff. species in Methylibium allowed) 30037 Methylibium Methylibium sp. CF059 14158 Methylibium Methylibium petroleiphilum PM1 # 31793 reads uniquely mapped to Methylobacterium (multi-hits among diff. species in Methylobacterium allowed) 11999 Methylobacterium Methylobacterium extorquens 2659 Methylobacterium Methylobacterium aquaticum 2622 Methylobacterium Methylobacterium sp. Leaf456 2368 Methylobacterium Methylobacterium populi 1907 Methylobacterium Methylobacterium sp. 77 1600 Methylobacterium Methylobacterium radiotolerans JCM 2831 1167 Methylobacterium Methylobacterium sp. ZNC0032 1020 Methylobacterium Methylobacterium sp. 4-46 1014 Methylobacterium Methylobacterium sp. C1 943 Methylobacterium Methylobacterium phyllosphaerae 768 Methylobacterium Methylobacterium nodulans ORS 2060 436 Methylobacterium Methylobacterium sp. Leaf89 412 Methylobacterium Methylobacterium populi BJ001 399 Methylobacterium Methylobacterium extorquens PA1 378 Methylobacterium Methylobacterium extorquens AM1 377 Methylobacterium Methylobacterium sp. Leaf99 375 Methylobacterium Methylobacterium sp. Leaf399 365 Methylobacterium Methylobacterium extorquens CM4 361 Methylobacterium Methylobacterium sp. AMS5 344 Methylobacterium Methylobacterium extorquens DM4 279 Methylobacterium Methylobacterium sp. ARG-1 # 15028 reads uniquely mapped to Methyloceanibacter (multi-hits among diff. species in Methyloceanibacter allowed) 15028 Methyloceanibacter Methyloceanibacter caenitepidi # 11128 reads uniquely mapped to Methyloferula (multi-hits among diff. species in Methyloferula allowed) 11128 Methyloferula Methyloferula stellata AR4 # 52026 reads uniquely mapped to Methylohalobius (multi-hits among diff. species in Methylohalobius allowed) 52026 Methylohalobius Methylohalobius crimeensis 10Ki # 86619 reads uniquely mapped to Methylomonas (multi-hits among diff. species in Methylomonas allowed) 23926 Methylomonas Methylomonas sp. DH-1 23364 Methylomonas Methylomonas denitrificans 22967 Methylomonas Methylomonas koyamae JCM 16701 16362 Methylomonas Methylomonas methanica MC09 # 73174 reads uniquely mapped to Methylophaga (multi-hits among diff. species in Methylophaga allowed) 22272 Methylophaga Methylophaga frappieri 19319 Methylophaga Methylophaga thiooxydans DMS010 15404 Methylophaga Methylophaga lonarensis MPL 13971 Methylophaga Methylophaga aminisulfidivorans MP 2208 Methylophaga NC_017857 # 26874 reads uniquely mapped to Methylopila (multi-hits among diff. species in Methylopila allowed) 23060 Methylopila Methylopila sp. M107 3814 Methylopila Methylopila sp. 73B # 79734 reads uniquely mapped to Methylosarcina (multi-hits among diff. species in Methylosarcina allowed) 47934 Methylosarcina Methylosarcina fibrata AML-C10 31800 Methylosarcina Methylosarcina lacus LW14 # 51520 reads uniquely mapped to Methyloversatilis (multi-hits among diff. species in Methyloversatilis allowed) 21635 Methyloversatilis Methyloversatilis discipulorum 12692 Methyloversatilis Methyloversatilis sp. RAC08 10948 Methyloversatilis Methyloversatilis universalis FAM5 6245 Methyloversatilis Methyloversatilis thermotolerans # 1961 reads uniquely mapped to Microbacterium (multi-hits among diff. species in Microbacterium allowed) 165 Microbacterium Microbacterium sp. CH12i 155 Microbacterium Microbacterium sp. C448 151 Microbacterium Microbacterium gubbeenense DSM 15944 114 Microbacterium Microbacterium sp. CGR1 108 Microbacterium Microbacterium sp. 1.5R 107 Microbacterium Microbacterium luticocti DSM 19459 94 Microbacterium Microbacterium gorillae 84 Microbacterium Microbacterium sp. Root61 72 Microbacterium Microbacterium testaceum StLB037 66 Microbacterium Microbacterium aurum 57 Microbacterium Microbacterium sp. Root166 55 Microbacterium Microbacterium paludicola 53 Microbacterium Microbacterium sp. No. 7 52 Microbacterium Microbacterium sp. BH-3-3-3 51 Microbacterium Microbacterium oxydans 41 Microbacterium Microbacterium sp. UNCCL10 40 Microbacterium Microbacterium sp. PAMC 28756 38 Microbacterium Microbacterium sp. XT11 33 Microbacterium Microbacterium chocolatum 30 Microbacterium Microbacterium mangrovi 30 Microbacterium Microbacterium azadirachtae 30 Microbacterium Microbacterium foliorum 30 Microbacterium Microbacterium sp. CF335 29 Microbacterium Microbacterium oleivorans NBRC 103075 27 Microbacterium Microbacterium sp. B19 25 Microbacterium Microbacterium ketosireducens 23 Microbacterium Microbacterium hydrocarbonoxydans NBRC 103074 22 Microbacterium Microbacterium profundi 22 Microbacterium Microbacterium trichothecenolyticum 21 Microbacterium Microbacterium ginsengisoli 19 Microbacterium Microbacterium hominis NBRC 15708 18 Microbacterium Microbacterium yannicii PS01 18 Microbacterium Microbacterium paraoxydans DH1b 17 Microbacterium Microbacterium sp. GCS4 16 Microbacterium Microbacterium sp. Root180 16 Microbacterium Microbacterium sp. Root53 14 Microbacterium Microbacterium indicum DSM 19969 11 Microbacterium Microbacterium hydrocarbonoxydans 7 Microbacterium Microbacterium maritypicum MF109 # 2254 reads uniquely mapped to Micrococcus (multi-hits among diff. species in Micrococcus allowed) 2254 Micrococcus Micrococcus luteus NCTC 2665 # 4349 reads uniquely mapped to Microcoleus (multi-hits among diff. species in Microcoleus allowed) 4349 Microcoleus Microcoleus sp. PCC 7113 # 2683 reads uniquely mapped to Microcystis (multi-hits among diff. species in Microcystis allowed) 904 Microcystis Microcystis aeruginosa NIES-2549 899 Microcystis Microcystis aeruginosa NIES-2481 862 Microcystis Microcystis aeruginosa NIES-843 18 Microcystis NZ_CP011339 # 2722 reads uniquely mapped to Microlunatus (multi-hits among diff. species in Microlunatus allowed) 2722 Microlunatus Microlunatus phosphovorus NM-1 # 31624 reads uniquely mapped to Microvirga (multi-hits among diff. species in Microvirga allowed) 13683 Microvirga Microvirga vignae 9168 Microvirga Microvirga lotononidis 6321 Microvirga Microvirga massiliensis 2452 Microvirga Microvirga flocculans ATCC BAA-817 # 2681 reads uniquely mapped to Mobilicoccus (multi-hits among diff. species in Mobilicoccus allowed) 1547 Mobilicoccus Mobilicoccus sp. SIT2 1134 Mobilicoccus Mobilicoccus pelagius NBRC 104925 # 135410 reads uniquely mapped to Moellerella (multi-hits among diff. species in Moellerella allowed) 135410 Moellerella Moellerella wisconsensis ATCC 35017 # 4490 reads uniquely mapped to Moorea (multi-hits among diff. species in Moorea allowed) 3611 Moorea Moorea producens PAL-8-15-08-1 879 Moorea Moorea producens JHB # 79446 reads uniquely mapped to Moraxella (multi-hits among diff. species in Moraxella allowed) 20408 Moraxella Moraxella bovoculi 18807 Moraxella Moraxella osloensis 15020 Moraxella Moraxella macacae 0408225 11774 Moraxella Moraxella catarrhalis 4397 Moraxella Moraxella ovis 4123 Moraxella Moraxella boevrei DSM 14165 3728 Moraxella Moraxella catarrhalis BBH18 1189 Moraxella Moraxella caprae DSM 19149 # 186773 reads uniquely mapped to Morganella (multi-hits among diff. species in Morganella allowed) 102404 Morganella Morganella morganii 84369 Morganella Morganella morganii subsp. morganii KT # 97459 reads uniquely mapped to Moritella (multi-hits among diff. species in Moritella allowed) 88819 Moritella Moritella viscosa 8640 Moritella Moritella dasanensis ArB 0140 # 5433 reads uniquely mapped to Mycobacterium (multi-hits among diff. species in Mycobacterium allowed) 264 Mycobacterium Mycobacterium heckeshornense 237 Mycobacterium Mycobacterium sp. KMS 209 Mycobacterium Mycobacterium sp. JLS 194 Mycobacterium Mycobacterium abscessus subsp. bolletii 185 Mycobacterium Mycobacterium abscessus 185 Mycobacterium Mycobacterium sp. MCS 165 Mycobacterium Mycobacterium abscessus subsp. abscessus 162 Mycobacterium Mycobacterium smegmatis 162 Mycobacterium Mycobacterium smegmatis str. MC2 155 161 Mycobacterium Mycobacterium cosmeticum 127 Mycobacterium Mycobacterium bovis BCG str. Tokyo 172 116 Mycobacterium Mycobacterium tuberculosis 114 Mycobacterium Mycobacterium leprae Br4923 109 Mycobacterium Mycobacterium kansasii ATCC 12478 105 Mycobacterium Mycobacterium abscessus subsp. massiliense str. GO 06 102 Mycobacterium Mycobacterium kansasii 824 98 Mycobacterium Mycobacterium leprae TN 95 Mycobacterium Mycobacterium sp. NRRL B-3805 88 Mycobacterium Mycobacterium aurum 86 Mycobacterium Mycobacterium sp. Root265 84 Mycobacterium Mycobacterium sp. Root135 78 Mycobacterium Mycobacterium sp. UM_Kg1 74 Mycobacterium Mycobacterium neoaurum VKM Ac-1815D 72 Mycobacterium NZ_LAWX01000020 69 Mycobacterium Mycobacterium mucogenicum 67 Mycobacterium Mycobacterium avium subsp. paratuberculosis K-10 65 Mycobacterium Mycobacterium avium subsp. paratuberculosis 65 Mycobacterium Mycobacterium avium subsp. hominissuis 61 Mycobacterium Mycobacterium avium 61 Mycobacterium Mycobacterium sp. EPa45 59 Mycobacterium Mycobacterium marinum E11 56 Mycobacterium Mycobacterium hassiacum DSM 44199 55 Mycobacterium Mycobacterium immunogenum 55 Mycobacterium Mycobacterium kyorinense 51 Mycobacterium Mycobacterium vanbaalenii PYR-1 51 Mycobacterium Mycobacterium sp. djl-10 47 Mycobacterium Mycobacterium phlei 47 Mycobacterium Mycobacterium xenopi RIVM700367 46 Mycobacterium Mycobacterium rhodesiae NBB3 43 Mycobacterium Mycobacterium fortuitum 43 Mycobacterium Mycobacterium vaccae 95051 43 Mycobacterium Mycobacterium haemophilum DSM 44634 41 Mycobacterium Mycobacterium chlorophenolicum 41 Mycobacterium Mycobacterium sp. VKM Ac-1817D 40 Mycobacterium Mycobacterium liflandii 128FXT 39 Mycobacterium Mycobacterium sp. URHB0044 38 Mycobacterium Mycobacterium chubuense NBB4 38 Mycobacterium Mycobacterium thermoresistibile ATCC 19527 36 Mycobacterium Mycobacterium simiae 36 Mycobacterium Mycobacterium avium subsp. avium Env 77 31 Mycobacterium Mycobacterium triplex 29 Mycobacterium Mycobacterium gilvum Spyr1 28 Mycobacterium Mycobacterium marinum M 28 Mycobacterium Mycobacterium septicum DSM 44393 28 Mycobacterium Mycobacterium brisbanense 27 Mycobacterium Mycobacterium sp. JS623 26 Mycobacterium Mycobacterium iranicum UM_TJL 26 Mycobacterium Mycobacterium nebraskense 25 Mycobacterium Mycobacterium sp. GA-0227b 25 Mycobacterium Mycobacterium tuberculosis KZN 4207 24 Mycobacterium Mycobacterium litorale 23 Mycobacterium Mycobacterium gordonae 23 Mycobacterium NZ_CP020381 23 Mycobacterium Mycobacterium tuberculosis KZN 605 22 Mycobacterium Mycobacterium sp. QIA-37 22 Mycobacterium Mycobacterium tuberculosis KZN 1435 21 Mycobacterium Mycobacterium heraklionense 19 Mycobacterium Mycobacterium gilvum PYR-GCK 16 Mycobacterium Mycobacterium setense 14 Mycobacterium Mycobacterium paraintracellulare 14 Mycobacterium Mycobacterium colombiense CECT 3035 12 Mycobacterium Mycobacterium yongonense 05-1390 12 Mycobacterium Mycobacterium avium subsp. avium 2285 (S) 12 Mycobacterium Mycobacterium sp. YC-RL4 12 Mycobacterium Mycobacterium intracellulare MOTT-02 12 Mycobacterium Mycobacterium sp. M26 11 Mycobacterium Mycobacterium bovis 11 Mycobacterium Mycobacterium abscessus UC22 11 Mycobacterium Mycobacterium aromaticivorans JS19b1 = JCM 16368 10 Mycobacterium Mycobacterium avium subsp. avium 2285 (R) 10 Mycobacterium Mycobacterium arupense 10 Mycobacterium Mycobacterium abscessus subsp. massiliense CCUG 48898 = JCM 15300 10 Mycobacterium Mycobacterium sp. WY10 9 Mycobacterium Mycobacterium abscessus subsp. bolletii 50594 9 Mycobacterium Mycobacterium indicus pranii MTCC 9506 9 Mycobacterium Mycobacterium parascrofulaceum ATCC BAA-614 9 Mycobacterium Mycobacterium tuberculosis 49-02 8 Mycobacterium Mycobacterium tuberculosis CCDC5180 8 Mycobacterium Mycobacterium sp. 155 8 Mycobacterium Mycobacterium sp. MOTT36Y 7 Mycobacterium Mycobacterium tuberculosis H37Ra 7 Mycobacterium Mycobacterium intracellulare ATCC 13950 7 Mycobacterium Mycobacterium tuberculosis H37Rv 7 Mycobacterium Mycobacterium avium 104 7 Mycobacterium Mycobacterium bovis BCG str. Moreau RDJ 7 Mycobacterium Mycobacterium avium subsp. paratuberculosis MAP4 6 Mycobacterium Mycobacterium bovis BCG 6 Mycobacterium Mycobacterium avium subsp. avium 6 Mycobacterium Mycobacterium avium subsp. hominissuis TH135 6 Mycobacterium Mycobacterium canettii CIPT 140010059 6 Mycobacterium Mycobacterium chelonae CCUG 47445 6 Mycobacterium Mycobacterium rhodesiae JS60 6 Mycobacterium Mycobacterium tuberculosis CCDC5079 5 Mycobacterium Mycobacterium chimaera 5 Mycobacterium Mycobacterium goodii 4 Mycobacterium Mycobacterium tuberculosis HKBS1 4 Mycobacterium Mycobacterium tuberculosis str. Beijing/NITR203 4 Mycobacterium Mycobacterium tuberculosis EAI5/NITR206 4 Mycobacterium Mycobacterium asiaticum DSM 44297 4 Mycobacterium NZ_CP010338 4 Mycobacterium Mycobacterium tuberculosis W-148 4 Mycobacterium Mycobacterium sp. GA-1331 4 Mycobacterium Mycobacterium genavense ATCC 51234 4 Mycobacterium NC_002945 4 Mycobacterium Mycobacterium tuberculosis BT1 4 Mycobacterium Mycobacterium abscessus subsp. bolletii 103 3 Mycobacterium Mycobacterium bovis BCG str. Mexico 3 Mycobacterium Mycobacterium tuberculosis CTRI-2 3 Mycobacterium Mycobacterium bovis BCG str. Korea 1168P 3 Mycobacterium Mycobacterium intracellulare 1956 3 Mycobacterium Mycobacterium tuberculosis str. Erdman = ATCC 35801 2 Mycobacterium Mycobacterium bovis BCG str. ATCC 35743 2 Mycobacterium Mycobacterium tuberculosis H37RvSiena 2 Mycobacterium NZ_CP010340 2 Mycobacterium Mycobacterium obuense 2 Mycobacterium Mycobacterium tuberculosis str. Kurono 2 Mycobacterium Mycobacterium tuberculosis 7199-99 2 Mycobacterium Mycobacterium africanum GM041182 2 Mycobacterium Mycobacterium tuberculosis F11 2 Mycobacterium Mycobacterium bovis BCG str. Pasteur 1173P2 2 Mycobacterium Mycobacterium tuberculosis EAI5 2 Mycobacterium Mycobacterium tuberculosis K 2 Mycobacterium Mycobacterium elephantis 2 Mycobacterium Mycobacterium mageritense DSM 44476 = CIP 104973 1 Mycobacterium Mycobacterium tuberculosis CDC1551 1 Mycobacterium Mycobacterium sinense # 8919 reads uniquely mapped to Mycoplasma (multi-hits among diff. species in Mycoplasma allowed) 2624 Mycoplasma Mycoplasma putrefaciens KS1 1353 Mycoplasma Mycoplasma putrefaciens Mput9231 472 Mycoplasma Mycoplasma yeatsii GM274B 419 Mycoplasma Mycoplasma hyosynoviae 348 Mycoplasma Mycoplasma cynos C142 329 Mycoplasma Mycoplasma crocodyli MP145 261 Mycoplasma Mycoplasma pullorum 215 Mycoplasma Mycoplasma capricolum subsp. capripneumoniae 182 Mycoplasma Mycoplasma alligatoris A21JP2 157 Mycoplasma Mycoplasma californicum HAZ160_1 143 Mycoplasma Mycoplasma canis PG 14 132 Mycoplasma Mycoplasma leonicaptivi ATCC 49890 122 Mycoplasma Mycoplasma cloacale ATCC 35276 111 Mycoplasma Mycoplasma hominis 110 Mycoplasma Mycoplasma capricolum subsp. capripneumoniae 87001 85 Mycoplasma Mycoplasma capricolum subsp. capripneumoniae M1601 77 Mycoplasma Mycoplasma mycoides subsp. mycoides 73 Mycoplasma Mycoplasma mobile 163K 66 Mycoplasma Mycoplasma arthritidis 158L3-1 61 Mycoplasma Mycoplasma wenyonii str. Massachusetts 58 Mycoplasma Mycoplasma auris 15026 56 Mycoplasma Mycoplasma anseris ATCC 49234 54 Mycoplasma Mycoplasma capricolum subsp. capricolum ATCC 27343 52 Mycoplasma Mycoplasma canis 51 Mycoplasma Mycoplasma orale ATCC 23714 49 Mycoplasma Mycoplasma alkalescens 14918 49 Mycoplasma Mycoplasma ovis str. Michigan 45 Mycoplasma Mycoplasma molare ATCC 27746 45 Mycoplasma Mycoplasma leachii PG50 42 Mycoplasma Mycoplasma californicum 39 Mycoplasma Mycoplasma sturni DSM 22021 36 Mycoplasma Mycoplasma salivarium ATCC 23064 35 Mycoplasma Mycoplasma mycoides subsp. capri str. GM12 35 Mycoplasma Mycoplasma cricetuli ATCC 35279 33 Mycoplasma Mycoplasma hyorhinis GDL-1 32 Mycoplasma Mycoplasma hominis ATCC 23114 32 Mycoplasma Mycoplasma bovigenitalium 51080 32 Mycoplasma Mycoplasma synoviae 53 32 Mycoplasma Mycoplasma penetrans HF-2 30 Mycoplasma Mycoplasma columborale ATCC 29258 29 Mycoplasma Mycoplasma simbae ATCC 49888 28 Mycoplasma Mycoplasma canadense 27 Mycoplasma Mycoplasma hyorhinis HUB-1 24 Mycoplasma Mycoplasma hyorhinis SK76 22 Mycoplasma Mycoplasma hominis ATCC 27545 22 Mycoplasma Mycoplasma synoviae ATCC 25204 21 Mycoplasma Mycoplasma buteonis 20 Mycoplasma Mycoplasma alvi ATCC 29626 20 Mycoplasma Mycoplasma collis ATCC 35278 17 Mycoplasma Mycoplasma genitalium M6320 16 Mycoplasma Mycoplasma genitalium M2288 16 Mycoplasma Mycoplasma pirum ATCC 25960 16 Mycoplasma Mycoplasma iowae 695 16 Mycoplasma Mycoplasma lipofaciens ATCC 35015 16 Mycoplasma Mycoplasma mycoides subsp. capri LC str. 95010 15 Mycoplasma Mycoplasma mycoides subsp. mycoides SC str. Gladysdale 14 Mycoplasma Mycoplasma bovis PG45 14 Mycoplasma Mycoplasma primatum ATCC 25948 13 Mycoplasma Mycoplasma pneumoniae 12 Mycoplasma Mycoplasma feriruminatoris 12 Mycoplasma Mycoplasma mycoides subsp. capri 12 Mycoplasma Mycoplasma meleagridis ATCC 25294 11 Mycoplasma Mycoplasma mycoides subsp. mycoides SC str. PG1 11 Mycoplasma Mycoplasma pulmonis UAB CTIP 11 Mycoplasma Mycoplasma gallisepticum VA94_7994-1-7P 11 Mycoplasma Mycoplasma pneumoniae FH 11 Mycoplasma Mycoplasma gallisepticum str. F 10 Mycoplasma Mycoplasma genitalium G37 10 Mycoplasma Mycoplasma gallisepticum NY01_2001.047-5-1P 10 Mycoplasma Mycoplasma arginini 10 Mycoplasma Mycoplasma anatis 1340 10 Mycoplasma Mycoplasma gallisepticum str. R(low) 9 Mycoplasma Mycoplasma genitalium M6282 9 Mycoplasma Mycoplasma gallisepticum NC08_2008.031-4-3P 9 Mycoplasma Mycoplasma bovis 9 Mycoplasma Mycoplasma genitalium M2321 9 Mycoplasma Mycoplasma gallisepticum str. R(high) 8 Mycoplasma Mycoplasma bovoculi M165/69 8 Mycoplasma Mycoplasma gallisepticum WI01_2001.043-13-2P 8 Mycoplasma Mycoplasma imitans ATCC 51306 8 Mycoplasma Mycoplasma pneumoniae MAC 7 Mycoplasma Mycoplasma gallisepticum NC06_2006.080-5-2P 7 Mycoplasma Mycoplasma dispar 6 Mycoplasma Mycoplasma flocculare ATCC 27399 6 Mycoplasma Mycoplasma haemofelis Ohio2 5 Mycoplasma Mycoplasma iners ATCC 19705 5 Mycoplasma Mycoplasma pneumoniae 309 5 Mycoplasma Mycoplasma pneumoniae 51494 5 Mycoplasma Mycoplasma pneumoniae PO1 5 Mycoplasma Mycoplasma gallisepticum CA06_2006.052-5-2P 5 Mycoplasma Mycoplasma pneumoniae M129 5 Mycoplasma Mycoplasma pneumoniae 39443 5 Mycoplasma Mycoplasma testudinis ATCC 43263 5 Mycoplasma Mycoplasma hyopneumoniae 168 4 Mycoplasma Mycoplasma haemocanis str. Illinois 4 Mycoplasma Mycoplasma hyorhinis DBS 1050 4 Mycoplasma Mycoplasma pneumoniae 54524 4 Mycoplasma Mycoplasma pneumoniae 54089 4 Mycoplasma Mycoplasma fermentans M64 4 Mycoplasma Mycoplasma gallisepticum NC96_1596-4-2P 4 Mycoplasma Mycoplasma gallisepticum NC95_13295-2-2P 4 Mycoplasma Mycoplasma hyopneumoniae 7448 3 Mycoplasma Mycoplasma pneumoniae M2592 3 Mycoplasma Mycoplasma conjunctivae 3 Mycoplasma Mycoplasma pneumoniae 85084 3 Mycoplasma Mycoplasma opalescens ATCC 27921 3 Mycoplasma Mycoplasma haemofelis str. Langford 1 3 Mycoplasma Mycoplasma agalactiae PG2 3 Mycoplasma Mycoplasma hyopneumoniae 232 3 Mycoplasma Mycoplasma pneumoniae 85138 3 Mycoplasma Mycoplasma pneumoniae M1139 3 Mycoplasma Mycoplasma agalactiae 2 Mycoplasma Mycoplasma suis str. Illinois 2 Mycoplasma Mycoplasma fermentans JER 2 Mycoplasma Mycoplasma hyopneumoniae 7422 2 Mycoplasma Mycoplasma felifaucium ATCC 43428 2 Mycoplasma Mycoplasma bovis HB0801 2 Mycoplasma Mycoplasma elephantis ATCC 51980 2 Mycoplasma Mycoplasma pneumoniae M129-B7 2 Mycoplasma Mycoplasma pneumoniae PI 1428 1 Mycoplasma Mycoplasma pneumoniae 19294 1 Mycoplasma Mycoplasma hyorhinis 1 Mycoplasma Mycoplasma hyopneumoniae 168-L 1 Mycoplasma Mycoplasma hyorhinis MCLD 1 Mycoplasma Mycoplasma bovis Hubei-1 1 Mycoplasma Mycoplasma hyopneumoniae J 1 Mycoplasma Mycoplasma suis KI3806 1 Mycoplasma Mycoplasma fermentans PG18 1 Mycoplasma Mycoplasma columbinum ATCC 29257 # 10427 reads uniquely mapped to Myroides (multi-hits among diff. species in Myroides allowed) 2445 Myroides Myroides sp. ZB35 2131 Myroides Myroides sp. A21 2043 Myroides Myroides odoratimimus 1949 Myroides Myroides profundi 1336 Myroides Myroides odoratus DSM 2801 523 Myroides Myroides injenensis M09-0166 # 1342 reads uniquely mapped to Nafulsella (multi-hits among diff. species in Nafulsella allowed) 1342 Nafulsella Nafulsella turpanensis ZLM-10 # 64049 reads uniquely mapped to Necropsobacter (multi-hits among diff. species in Necropsobacter allowed) 64049 Necropsobacter Necropsobacter massiliensis # 66966 reads uniquely mapped to Neisseria (multi-hits among diff. species in Neisseria allowed) 33632 Neisseria Neisseria meningitidis 9524 Neisseria Neisseria shayeganii 871 4356 Neisseria Neisseria gonorrhoeae 2538 Neisseria Neisseria bacilliformis ATCC BAA-1200 1249 Neisseria Neisseria sicca 1101 Neisseria Neisseria elongata subsp. glycolytica ATCC 29315 1035 Neisseria Neisseria weaveri 769 Neisseria Neisseria lactamica 020-06 666 Neisseria Neisseria meningitidis H44/76 648 Neisseria Neisseria meningitidis M04-240196 647 Neisseria Neisseria meningitidis M01-240149 611 Neisseria Neisseria meningitidis M01-240355 603 Neisseria Neisseria meningitidis 053442 588 Neisseria Neisseria meningitidis 8013 585 Neisseria Neisseria meningitidis MC58 579 Neisseria Neisseria meningitidis LNP21362 545 Neisseria Neisseria meningitidis NZ-05/33 544 Neisseria Neisseria gonorrhoeae NCCP11945 544 Neisseria Neisseria meningitidis G2136 532 Neisseria Neisseria lactamica 522 Neisseria Neisseria wadsworthii 9715 499 Neisseria Neisseria meningitidis M7124 493 Neisseria Neisseria meningitidis M0579 482 Neisseria Neisseria meningitidis alpha710 479 Neisseria Neisseria meningitidis alpha14 475 Neisseria Neisseria gonorrhoeae FA 1090 470 Neisseria Neisseria meningitidis FAM18 422 Neisseria Neisseria meningitidis Z2491 394 Neisseria Neisseria gonorrhoeae MS11 392 Neisseria Neisseria meningitidis WUE 2594 381 Neisseria Neisseria sp. 74A18 325 Neisseria Neisseria arctica 179 Neisseria Neisseria mucosa C102 157 Neisseria Neisseria cinerea ATCC 14685 # 6549 reads uniquely mapped to Neorickettsia (multi-hits among diff. species in Neorickettsia allowed) 3265 Neorickettsia Neorickettsia helminthoeca str. Oregon 1685 Neorickettsia Neorickettsia risticii str. Illinois 1599 Neorickettsia Neorickettsia sennetsu str. Miyayama # 6950 reads uniquely mapped to Neosynechococcus (multi-hits among diff. species in Neosynechococcus allowed) 6950 Neosynechococcus Neosynechococcus sphagnicola sy1 # 3769 reads uniquely mapped to Nesterenkonia (multi-hits among diff. species in Nesterenkonia allowed) 1749 Nesterenkonia Nesterenkonia alba DSM 19423 1088 Nesterenkonia Nesterenkonia sp. F 642 Nesterenkonia Nesterenkonia jeotgali 290 Nesterenkonia Nesterenkonia massiliensis # 49358 reads uniquely mapped to Nevskia (multi-hits among diff. species in Nevskia allowed) 34485 Nevskia Nevskia ramosa DSM 11499 14873 Nevskia Nevskia soli DSM 19509 # 1440 reads uniquely mapped to Niastella (multi-hits among diff. species in Niastella allowed) 1440 Niastella Niastella koreensis GR20-10 # 16931 reads uniquely mapped to Nitratireductor (multi-hits among diff. species in Nitratireductor allowed) 10817 Nitratireductor Nitratireductor basaltis 3218 Nitratireductor Nitratireductor indicus C115 1719 Nitratireductor Nitratireductor aquibiodomus NL21 = JCM 21793 1177 Nitratireductor Nitratireductor pacificus pht-3B # 8942 reads uniquely mapped to Nitratiruptor (multi-hits among diff. species in Nitratiruptor allowed) 8942 Nitratiruptor Nitratiruptor sp. SB155-2 # 97199 reads uniquely mapped to Nitrincola (multi-hits among diff. species in Nitrincola allowed) 37631 Nitrincola Nitrincola sp. A-D6 37416 Nitrincola Nitrincola nitratireducens 22152 Nitrincola Nitrincola lacisaponensis # 30080 reads uniquely mapped to Nitrobacter (multi-hits among diff. species in Nitrobacter allowed) 15109 Nitrobacter Nitrobacter hamburgensis X14 14971 Nitrobacter Nitrobacter winogradskyi Nb-255 # 69060 reads uniquely mapped to Nitrococcus (multi-hits among diff. species in Nitrococcus allowed) 69060 Nitrococcus Nitrococcus mobilis Nb-231 # 4938 reads uniquely mapped to Nocardia (multi-hits among diff. species in Nocardia allowed) 1477 Nocardia Nocardia sp. 348MFTsu5.1 626 Nocardia Nocardia sp. CNY236 584 Nocardia Nocardia seriolae 502 Nocardia Nocardia farcinica 313 Nocardia Nocardia nova SH22a 282 Nocardia Nocardia paucivorans NBRC 100373 273 Nocardia Nocardia rhamnosiphila NBRC 108938 191 Nocardia Nocardia brevicatena NBRC 12119 178 Nocardia Nocardia asteroides NBRC 15531 96 Nocardia Nocardia brasiliensis ATCC 700358 79 Nocardia Nocardia soli 67 Nocardia Nocardia transvalensis NBRC 15921 67 Nocardia Nocardia sp. BMG51109 28 Nocardia Nocardia pneumoniae NBRC 100136 26 Nocardia Nocardia mikamii NBRC 108933 22 Nocardia Nocardia cyriacigeorgica GUH-2 18 Nocardia Nocardia veterana NBRC 100344 14 Nocardia Nocardia carnea NBRC 14403 12 Nocardia Nocardia niwae NBRC 108934 = DSM 45340 12 Nocardia Nocardia farcinica IFM 10152 11 Nocardia Nocardia tenerifensis NBRC 101015 9 Nocardia Nocardia jiangxiensis NBRC 101359 7 Nocardia Nocardia takedensis NBRC 100417 7 Nocardia Nocardia arthritidis NBRC 100137 7 Nocardia Nocardia sp. BMG111209 7 Nocardia Nocardia higoensis NBRC 100133 7 Nocardia Nocardia otitidiscaviarum NBRC 14405 4 Nocardia Nocardia vinacea NBRC 16497 4 Nocardia Nocardia arizonensis 4 Nocardia Nocardia thailandica NBRC 100428 4 Nocardia Nocardia niigatensis NBRC 100131 # 3229 reads uniquely mapped to Nocardioides (multi-hits among diff. species in Nocardioides allowed) 412 Nocardioides Nocardioides sp. URHA0020 397 Nocardioides Nocardioides dokdonensis FR1436 376 Nocardioides Nocardioides sp. Soil805 346 Nocardioides Nocardioides luteus 293 Nocardioides Nocardioides sp. CF8 272 Nocardioides Nocardioides sp. Root682 250 Nocardioides Nocardioides sp. URHA0032 242 Nocardioides Nocardioides alkalitolerans DSM 16699 153 Nocardioides Nocardioides sp. Soil797 86 Nocardioides Nocardioides sp. Root151 67 Nocardioides Nocardioides sp. JS614 57 Nocardioides Nocardioides halotolerans DSM 19273 57 Nocardioides Nocardioides sp. J54 53 Nocardioides Nocardioides sp. Iso805N 51 Nocardioides Nocardioides sp. Leaf307 44 Nocardioides Nocardioides insulae DSM 17944 31 Nocardioides Nocardioides sp. Soil774 23 Nocardioides Nocardioides sp. Root79 19 Nocardioides Nocardioides sp. Root190 # 3900 reads uniquely mapped to Nodularia (multi-hits among diff. species in Nodularia allowed) 3900 Nodularia Nodularia spumigena CCY9414 # 4026 reads uniquely mapped to Nostoc (multi-hits among diff. species in Nostoc allowed) 1154 Nostoc Nostoc punctiforme PCC 73102 1056 Nostoc Nostoc sp. PCC 7120 763 Nostoc Nostoc sp. PCC 7107 637 Nostoc Nostoc sp. NIES-3756 416 Nostoc Nostoc sp. PCC 7524 # 7546 reads uniquely mapped to Novibacillus (multi-hits among diff. species in Novibacillus allowed) 7546 Novibacillus Novibacillus thermophilus # 17007 reads uniquely mapped to Novosphingobium (multi-hits among diff. species in Novosphingobium allowed) 2490 Novosphingobium Novosphingobium sp. Leaf2 2012 Novosphingobium Novosphingobium pentaromativorans US6-1 1802 Novosphingobium Novosphingobium sp. PP1Y 1608 Novosphingobium Novosphingobium sp. MBES04 1472 Novosphingobium Novosphingobium sp. AAP93 1321 Novosphingobium Novosphingobium barchaimii LL02 818 Novosphingobium Novosphingobium nitrogenifigens DSM 19370 802 Novosphingobium Novosphingobium resinovorum 760 Novosphingobium Novosphingobium aromaticivorans DSM 12444 729 Novosphingobium Novosphingobium lindaniclasticum LE124 709 Novosphingobium Novosphingobium acidiphilum DSM 19966 684 Novosphingobium Novosphingobium malaysiense 465 Novosphingobium Novosphingobium barchaimii 305 Novosphingobium Novosphingobium tardaugens NBRC 16725 275 Novosphingobium Novosphingobium sp. Rr 2-17 265 Novosphingobium Novosphingobium sp. AAP83 249 Novosphingobium Novosphingobium subterraneum 241 Novosphingobium Novosphingobium capsulatum NBRC 12533 # 174083 reads uniquely mapped to Obesumbacterium (multi-hits among diff. species in Obesumbacterium allowed) 174083 Obesumbacterium Obesumbacterium proteus # 33659 reads uniquely mapped to Oceanicaulis (multi-hits among diff. species in Oceanicaulis allowed) 22169 Oceanicaulis Oceanicaulis alexandrii DSM 11625 6310 Oceanicaulis Oceanicaulis sp. HTCC2633 5180 Oceanicaulis Oceanicaulis sp. HL-87 # 117440 reads uniquely mapped to Oceanimonas (multi-hits among diff. species in Oceanimonas allowed) 111945 Oceanimonas Oceanimonas sp. GK1 5495 Oceanimonas Oceanimonas smirnovii ATCC BAA-899 # 13790 reads uniquely mapped to Oceanospirillum (multi-hits among diff. species in Oceanospirillum allowed) 13790 Oceanospirillum Oceanospirillum maris DSM 6286 # 17449 reads uniquely mapped to Ochrobactrum (multi-hits among diff. species in Ochrobactrum allowed) 4526 Ochrobactrum Ochrobactrum pituitosum 4405 Ochrobactrum Ochrobactrum pseudogrignonense 4268 Ochrobactrum Ochrobactrum anthropi 4250 Ochrobactrum Ochrobactrum anthropi ATCC 49188 # 61289 reads uniquely mapped to Oleispira (multi-hits among diff. species in Oleispira allowed) 61289 Oleispira Oleispira antarctica RB-8 # 3786 reads uniquely mapped to Orientia (multi-hits among diff. species in Orientia allowed) 1540 Orientia Orientia tsutsugamushi str. Ikeda 1470 Orientia Orientia chuto str. Fuller 776 Orientia Orientia tsutsugamushi str. Boryong # 2390 reads uniquely mapped to Ornithinimicrobium (multi-hits among diff. species in Ornithinimicrobium allowed) 2390 Ornithinimicrobium Ornithinimicrobium pekingense DSM 21552 # 7870 reads uniquely mapped to Oscillatoria (multi-hits among diff. species in Oscillatoria allowed) 3829 Oscillatoria Oscillatoria acuminata PCC 6304 2624 Oscillatoria Oscillatoria sp. PCC 10802 1417 Oscillatoria Oscillatoria nigro-viridis PCC 7112 # 2091 reads uniquely mapped to Owenweeksia (multi-hits among diff. species in Owenweeksia allowed) 2091 Owenweeksia Owenweeksia hongkongensis DSM 17368 # 10390 reads uniquely mapped to Paenibacillus (multi-hits among diff. species in Paenibacillus allowed) 2420 Paenibacillus Paenibacillus ihumii 1421 Paenibacillus Paenibacillus alvei DSM 29 1229 Paenibacillus Paenibacillus chitinolyticus NBRC 15660 557 Paenibacillus Paenibacillus mucilaginosus K02 550 Paenibacillus Paenibacillus mucilaginosus 3016 522 Paenibacillus Paenibacillus mucilaginosus KNP414 483 Paenibacillus Paenibacillus polymyxa 181 Paenibacillus Paenibacillus bovis 141 Paenibacillus Paenibacillus larvae subsp. pulvifaciens 137 Paenibacillus Paenibacillus sp. FF9 99 Paenibacillus Paenibacillus xylanexedens 98 Paenibacillus Paenibacillus sp. FSL R5-0912 97 Paenibacillus Paenibacillus peoriae 95 Paenibacillus Paenibacillus sp. JDR-2 90 Paenibacillus Paenibacillus polymyxa SC2 89 Paenibacillus Paenibacillus polymyxa CR1 88 Paenibacillus Paenibacillus sp. FSL P4-0081 88 Paenibacillus Paenibacillus swuensis 87 Paenibacillus Paenibacillus stellifer 81 Paenibacillus Paenibacillus polymyxa M1 80 Paenibacillus Paenibacillus polymyxa E681 80 Paenibacillus Paenibacillus sp. LPB0068 77 Paenibacillus Paenibacillus naphthalenovorans 77 Paenibacillus Paenibacillus odorifer 76 Paenibacillus Paenibacillus curdlanolyticus YK9 75 Paenibacillus Paenibacillus terrae HPL-003 74 Paenibacillus Paenibacillus sp. FSL R7-0331 70 Paenibacillus Paenibacillus polymyxa SQR-21 69 Paenibacillus Paenibacillus sp. FSL R7-0273 69 Paenibacillus Paenibacillus larvae subsp. larvae 68 Paenibacillus Paenibacillus graminis 65 Paenibacillus Paenibacillus larvae subsp. larvae DSM 25430 62 Paenibacillus Paenibacillus sp. FSL H7-0737 59 Paenibacillus Paenibacillus sp. D9 58 Paenibacillus Paenibacillus sp. FSL R5-0345 57 Paenibacillus Paenibacillus borealis 57 Paenibacillus Paenibacillus yonginensis 55 Paenibacillus Paenibacillus sp. IHBB 10380 50 Paenibacillus Paenibacillus durus 49 Paenibacillus Paenibacillus sp. FSL H7-0357 48 Paenibacillus Paenibacillus sp. 32O-W 48 Paenibacillus Paenibacillus beijingensis 47 Paenibacillus Paenibacillus riograndensis SBR5 44 Paenibacillus Paenibacillus durus ATCC 35681 39 Paenibacillus Paenibacillus sabinae T27 36 Paenibacillus Paenibacillus glucanolyticus 36 Paenibacillus Paenibacillus sp. VKM B-2647 30 Paenibacillus Paenibacillus ehimensis A2 29 Paenibacillus Paenibacillus lactis 154 27 Paenibacillus Paenibacillus sp. Y412MC10 20 Paenibacillus Paenibacillus barengoltzii G22 16 Paenibacillus Paenibacillus senegalensis JC66 15 Paenibacillus Paenibacillus macerans 10 Paenibacillus Paenibacillus algorifonticola 9 Paenibacillus Paenibacillus pabuli NBRC 13638 9 Paenibacillus Paenibacillus antibioticophila 8 Paenibacillus Paenibacillus etheri 8 Paenibacillus Paenibacillus pini JCM 16418 8 Paenibacillus Paenibacillus gorillae 7 Paenibacillus Paenibacillus popilliae ATCC 14706 5 Paenibacillus Paenibacillus darwinianus 4 Paenibacillus Paenibacillus sp. OSY-SE 3 Paenibacillus Paenibacillus sp. P1XP2 3 Paenibacillus Paenibacillus jilunlii 1 Paenibacillus Paenibacillus sp. TCA20 # 1668 reads uniquely mapped to Paludibacter (multi-hits among diff. species in Paludibacter allowed) 1668 Paludibacter Paludibacter propionicigenes WB4 # 55038 reads uniquely mapped to Pandoraea (multi-hits among diff. species in Pandoraea allowed) 26562 Pandoraea Pandoraea thiooxydans 6687 Pandoraea Pandoraea pnomenusa 6070 Pandoraea Pandoraea apista 5597 Pandoraea Pandoraea norimbergensis 2714 Pandoraea Pandoraea pnomenusa 3kgm 1725 Pandoraea Pandoraea vervacti 1690 Pandoraea Pandoraea oxalativorans 1356 Pandoraea Pandoraea faecigallinarum 1345 Pandoraea Pandoraea sputorum 1292 Pandoraea Pandoraea pulmonicola # 234199 reads uniquely mapped to Pantoea (multi-hits among diff. species in Pantoea allowed) 51365 Pantoea Pantoea sp. PSNIH2 38620 Pantoea Pantoea sp. At-9b 19010 Pantoea Pantoea rwandensis 16856 Pantoea Pantoea agglomerans 15529 Pantoea Pantoea ananatis LMG 5342 15426 Pantoea Pantoea ananatis LMG 20103 13763 Pantoea Pantoea sp. IMH 12951 Pantoea Pantoea sp. PSNIH1 11264 Pantoea Pantoea ananatis AJ13355 9907 Pantoea Pantoea ananatis 8797 Pantoea Pantoea vagans C9-1 8288 Pantoea Pantoea ananatis PA13 5091 Pantoea Pantoea septica 3666 Pantoea Candidatus Pantoea carbekii 3666 Pantoea Pantoea dispersa EGD-AAK13 # 58320 reads uniquely mapped to Paraburkholderia (multi-hits among diff. species in Paraburkholderia allowed) 8523 Paraburkholderia Paraburkholderia xenovorans LB400 8483 Paraburkholderia Paraburkholderia andropogonis 7833 Paraburkholderia Paraburkholderia caribensis 4583 Paraburkholderia Paraburkholderia sprentiae WSM5005 4412 Paraburkholderia Paraburkholderia caribensis MBA4 4281 Paraburkholderia Paraburkholderia phenoliruptrix BR3459a 4068 Paraburkholderia Paraburkholderia phytofirmans PsJN 3684 Paraburkholderia Paraburkholderia phymatum STM815 3645 Paraburkholderia Paraburkholderia fungorum 2690 Paraburkholderia Paraburkholderia rhizoxinica HKI 454 2373 Paraburkholderia Paraburkholderia sp. SOS3 2078 Paraburkholderia Paraburkholderia sacchari 848 Paraburkholderia Paraburkholderia kururiensis subsp. thiooxydans NBRC 107107 819 Paraburkholderia Paraburkholderia acidipaludis NBRC 101816 # 18521 reads uniquely mapped to Paracoccus (multi-hits among diff. species in Paracoccus allowed) 5020 Paracoccus Paracoccus aminovorans 2804 Paracoccus Paracoccus sp. 228 2615 Paracoccus Paracoccus aminophilus JCM 7686 2537 Paracoccus Paracoccus sphaerophysae 1404 Paracoccus Paracoccus denitrificans PD1222 1241 Paracoccus Paracoccus yeei ATCC BAA-599 1100 Paracoccus Paracoccus sp. TRP 730 Paracoccus Paracoccus yeei 534 Paracoccus Paracoccus zeaxanthinifaciens ATCC 21588 235 Paracoccus Paracoccus sanguinis 109 Paracoccus Paracoccus sp. J55 104 Paracoccus Paracoccus versutus 88 Paracoccus Paracoccus halophilus # 27682 reads uniquely mapped to Pararhodospirillum (multi-hits among diff. species in Pararhodospirillum allowed) 27682 Pararhodospirillum Pararhodospirillum photometricum DSM 122 # 96146 reads uniquely mapped to Pasteurella (multi-hits among diff. species in Pasteurella allowed) 38389 Pasteurella Pasteurella multocida subsp. multocida OH4807 23338 Pasteurella Pasteurella multocida 4854 Pasteurella Pasteurella multocida subsp. multocida 3821 Pasteurella Pasteurella multocida subsp. multocida str. 3480 3813 Pasteurella Pasteurella bettyae CCUG 2042 3316 Pasteurella Pasteurella multocida subsp. multocida str. Pm70 2772 Pasteurella Pasteurella multocida subsp. multocida HB01 2681 Pasteurella Pasteurella multocida OH1905 2667 Pasteurella Pasteurella multocida 36950 2658 Pasteurella Pasteurella multocida subsp. multocida str. HN06 2640 Pasteurella Pasteurella multocida subsp. multocida PMTB2.1 2622 Pasteurella Pasteurella multocida subsp. multocida str. HN07 2575 Pasteurella Pasteurella multocida subsp. multocida str. HB03 # 9236 reads uniquely mapped to Patulibacter (multi-hits among diff. species in Patulibacter allowed) 4521 Patulibacter Patulibacter minatonensis DSM 18081 3525 Patulibacter Patulibacter americanus DSM 16676 1190 Patulibacter Patulibacter medicamentivorans # 210554 reads uniquely mapped to Pectobacterium (multi-hits among diff. species in Pectobacterium allowed) 45393 Pectobacterium Pectobacterium carotovorum subsp. brasiliense 35950 Pectobacterium Pectobacterium carotovorum subsp. carotovorum PC1 27105 Pectobacterium Pectobacterium carotovorum subsp. carotovorum PCC21 25112 Pectobacterium Pectobacterium atrosepticum 18432 Pectobacterium Pectobacterium wasabiae CFBP 3304 16920 Pectobacterium Pectobacterium parmentieri 15223 Pectobacterium Pectobacterium sp. SCC3193 13921 Pectobacterium Pectobacterium parmentieri WPP163 12498 Pectobacterium Pectobacterium atrosepticum SCRI1043 # 21500 reads uniquely mapped to Pediococcus (multi-hits among diff. species in Pediococcus allowed) 5973 Pediococcus Pediococcus damnosus 4344 Pediococcus Pediococcus claussenii 2186 Pediococcus Pediococcus claussenii ATCC BAA-344 1663 Pediococcus Pediococcus argentinicus 1533 Pediococcus Pediococcus acidilactici 1520 Pediococcus Pediococcus pentosaceus 1285 Pediococcus Pediococcus pentosaceus ATCC 25745 1263 Pediococcus Pediococcus pentosaceus SL4 725 Pediococcus Pediococcus cellicola 440 Pediococcus Pediococcus ethanolidurans 439 Pediococcus Pediococcus inopinatus 129 Pediococcus Pediococcus stilesii # 19221 reads uniquely mapped to Pedobacter (multi-hits among diff. species in Pedobacter allowed) 4485 Pedobacter Pedobacter sp. PACM 27299 4122 Pedobacter Pedobacter cryoconitis 2624 Pedobacter Pedobacter agri PB92 2616 Pedobacter Pedobacter steynii 2040 Pedobacter Pedobacter heparinus DSM 2366 1396 Pedobacter Pedobacter arcticus A12 1153 Pedobacter Pedobacter sp. Hv1 582 Pedobacter Pedobacter antarcticus 4BY 104 Pedobacter Pedobacter glucosidilyticus DSM 23534 99 Pedobacter Pedobacter oryzae DSM 19973 # 7103 reads uniquely mapped to Peptoniphilus (multi-hits among diff. species in Peptoniphilus allowed) 2221 Peptoniphilus Peptoniphilus sp. oral taxon 375 str. F0436 1688 Peptoniphilus Peptoniphilus lacrimalis DSM 7455 1105 Peptoniphilus Peptoniphilus sp. ING2-D1G 558 Peptoniphilus Peptoniphilus sp. ChDC B134 443 Peptoniphilus Peptoniphilus senegalensis JC140 400 Peptoniphilus Peptoniphilus indolicus ATCC 29427 213 Peptoniphilus Peptoniphilus obesi ph1 139 Peptoniphilus Peptoniphilus duerdenii ATCC BAA-1640 138 Peptoniphilus Peptoniphilus rhinitidis 1-13 134 Peptoniphilus Peptoniphilus sp. BV3C26 37 Peptoniphilus Peptoniphilus timonensis JC401 21 Peptoniphilus Peptoniphilus harei ACS-146-V-Sch2b 6 Peptoniphilus Peptoniphilus grossensis ph5 # 79988 reads uniquely mapped to Perlucidibaca (multi-hits among diff. species in Perlucidibaca allowed) 79988 Perlucidibaca Perlucidibaca piscinae DSM 21586 # 141965 reads uniquely mapped to Photobacterium (multi-hits among diff. species in Photobacterium allowed) 25834 Photobacterium Photobacterium damselae subsp. damselae CIP 102761 25679 Photobacterium Photobacterium gaetbulicola Gung47 21475 Photobacterium Photobacterium profundum SS9 12877 Photobacterium Photobacterium ganghwense 9651 Photobacterium Photobacterium marinum 8974 Photobacterium Photobacterium aquae 7882 Photobacterium Photobacterium kishitanii 7251 Photobacterium Photobacterium sp. JCM 19050 6763 Photobacterium Photobacterium sanctipauli 5988 Photobacterium Photobacterium leiognathi 5452 Photobacterium Photobacterium swingsii 4138 Photobacterium Photobacterium galatheae 1 Photobacterium Photobacterium halotolerans DSM 18316 # 170689 reads uniquely mapped to Photorhabdus (multi-hits among diff. species in Photorhabdus allowed) 82366 Photorhabdus Photorhabdus temperata subsp. thracensis 46792 Photorhabdus Photorhabdus asymbiotica 41531 Photorhabdus Photorhabdus luminescens subsp. laumondii TTO1 # 2945 reads uniquely mapped to Phycicoccus (multi-hits among diff. species in Phycicoccus allowed) 1218 Phycicoccus Phycicoccus sp. Soil748 633 Phycicoccus Phycicoccus sp. Soil803 572 Phycicoccus Phycicoccus sp. Root563 522 Phycicoccus Phycicoccus jejuensis # 10303 reads uniquely mapped to Planktothricoides (multi-hits among diff. species in Planktothricoides allowed) 10303 Planktothricoides Planktothricoides sp. SR001 # 2778 reads uniquely mapped to Planktothrix (multi-hits among diff. species in Planktothrix allowed) 2778 Planktothrix Planktothrix agardhii NIVA-CYA 126/8 # 24483 reads uniquely mapped to Planococcus (multi-hits among diff. species in Planococcus allowed) 13763 Planococcus Planococcus kocurii 3235 Planococcus Planococcus maritimus 2885 Planococcus Planococcus plakortidis 2379 Planococcus Planococcus rifietoensis 1557 Planococcus Planococcus donghaensis 362 Planococcus Planococcus sp. CAU13 71 Planococcus Planococcus halocryophilus 67 Planococcus Planococcus sp. L10.15 56 Planococcus Planococcus faecalis 56 Planococcus Planococcus antarcticus DSM 14505 52 Planococcus Planococcus sp. PAMC 21323 # 165878 reads uniquely mapped to Plesiomonas (multi-hits among diff. species in Plesiomonas allowed) 165878 Plesiomonas Plesiomonas shigelloides # 10339 reads uniquely mapped to Pleurocapsa (multi-hits among diff. species in Pleurocapsa allowed) 7642 Pleurocapsa Pleurocapsa sp. PCC 7327 2697 Pleurocapsa Pleurocapsa sp. PCC 7319 # 969 reads uniquely mapped to Polaribacter (multi-hits among diff. species in Polaribacter allowed) 208 Polaribacter Polaribacter sp. Hel1_33_49 171 Polaribacter Polaribacter sp. BM10 166 Polaribacter Polaribacter reichenbachii 141 Polaribacter Polaribacter vadi 108 Polaribacter Polaribacter irgensii 23-P 101 Polaribacter Polaribacter dokdonensis DSW-5 74 Polaribacter Polaribacter sp. MED152 # 46981 reads uniquely mapped to Polaromonas (multi-hits among diff. species in Polaromonas allowed) 23120 Polaromonas Polaromonas naphthalenivorans CJ2 14782 Polaromonas Polaromonas sp. EUR3 1.2.1 9079 Polaromonas Polaromonas sp. JS666 # 42391 reads uniquely mapped to Polycyclovorans (multi-hits among diff. species in Polycyclovorans allowed) 42391 Polycyclovorans Polycyclovorans algicola TG408 # 44847 reads uniquely mapped to Polynucleobacter (multi-hits among diff. species in Polynucleobacter allowed) 19250 Polynucleobacter Polynucleobacter asymbioticus 10429 Polynucleobacter Polynucleobacter duraquae 8746 Polynucleobacter Polynucleobacter necessarius subsp. necessarius STIR1 6422 Polynucleobacter Polynucleobacter asymbioticus QLW-P1DMWA-1 # 16587 reads uniquely mapped to Pontibacter (multi-hits among diff. species in Pontibacter allowed) 6799 Pontibacter Pontibacter lucknowensis 4456 Pontibacter Pontibacter roseus DSM 17521 3431 Pontibacter Pontibacter korlensis 1581 Pontibacter Pontibacter akesuensis 320 Pontibacter Pontibacter actiniarum DSM 19842 # 12920 reads uniquely mapped to Ponticaulis (multi-hits among diff. species in Ponticaulis allowed) 12920 Ponticaulis Ponticaulis koreensis DSM 19734 # 12743 reads uniquely mapped to Porphyrobacter (multi-hits among diff. species in Porphyrobacter allowed) 5176 Porphyrobacter Porphyrobacter cryptus DSM 12079 4829 Porphyrobacter Porphyrobacter sp. HL-46 1773 Porphyrobacter Porphyrobacter mercurialis 448 Porphyrobacter Porphyrobacter neustonensis 227 Porphyrobacter Porphyrobacter sp. AAP60 192 Porphyrobacter Porphyrobacter sp. LM 6 98 Porphyrobacter Porphyrobacter sp. AAP82 # 79730 reads uniquely mapped to Porticoccus (multi-hits among diff. species in Porticoccus allowed) 79730 Porticoccus Porticoccus hydrocarbonoclasticus MCTG13d # 187811 reads uniquely mapped to Pragia (multi-hits among diff. species in Pragia allowed) 187811 Pragia Pragia fontium # 15020 reads uniquely mapped to Prevotella (multi-hits among diff. species in Prevotella allowed) 7733 Prevotella Prevotella sp. 10(H) 3877 Prevotella Prevotella enoeca 1748 Prevotella Prevotella sp. S7 MS 2 363 Prevotella Prevotella buccae ATCC 33574 265 Prevotella Prevotella oryzae DSM 17970 131 Prevotella Prevotella oulorum JCM 14966 124 Prevotella Prevotella ruminicola 23 70 Prevotella Prevotella sp. oral taxon 299 str. F0039 63 Prevotella Prevotella bryantii B14 54 Prevotella Prevotella sp. 109 51 Prevotella Prevotella oris DSM 18711 = JCM 12252 42 Prevotella Prevotella sp. HUN102 40 Prevotella Prevotella salivae DSM 15606 39 Prevotella Prevotella denticola F0289 31 Prevotella Prevotella dentalis DSM 3688 30 Prevotella Prevotella intermedia 28 Prevotella Prevotella multiformis DSM 16608 26 Prevotella Prevotella disiens JCM 6334 = ATCC 29426 22 Prevotella Prevotella melaninogenica ATCC 25845 22 Prevotella Prevotella bivia DSM 20514 21 Prevotella Prevotella multisaccharivorax DSM 17128 20 Prevotella Prevotella saccharolytica JCM 17484 19 Prevotella Prevotella micans DSM 21469 = JCM 16134 16 Prevotella Prevotella sp. FD3004 16 Prevotella Prevotella intermedia 17 16 Prevotella Prevotella marshii DSM 16973 = JCM 13450 15 Prevotella Prevotella sp. AGR2160 13 Prevotella Prevotella nigrescens ATCC 33563 12 Prevotella Prevotella maculosa DSM 19339 = JCM 15638 11 Prevotella Prevotella buccalis ATCC 35310 11 Prevotella Prevotella oralis ATCC 33269 11 Prevotella Prevotella intermedia ATCC 25611 = DSM 20706 10 Prevotella Prevotella fusca JCM 17724 9 Prevotella Prevotella scopos JCM 17725 8 Prevotella Prevotella baroniae DSM 16972 = JCM 13447 8 Prevotella Prevotella nanceiensis DSM 19126 = JCM 15639 7 Prevotella Prevotella histicola JCM 15637 = DNF00424 6 Prevotella Prevotella dentasini JCM 15908 6 Prevotella Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 4 Prevotella Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 4 Prevotella Prevotella sp. P4-76 3 Prevotella Prevotella pallens ATCC 700821 3 Prevotella Prevotella copri DSM 18205 3 Prevotella Prevotella amnii DSM 23384 = JCM 14753 3 Prevotella Prevotella sp. S7-1-8 3 Prevotella Prevotella stercorea DSM 18206 2 Prevotella Prevotella albensis DSM 11370 = JCM 12258 1 Prevotella Prevotella bergensis DSM 17361 # 4757 reads uniquely mapped to Prochlorococcus (multi-hits among diff. species in Prochlorococcus allowed) 1383 Prochlorococcus Prochlorococcus sp. MIT 0603 864 Prochlorococcus Prochlorococcus marinus str. MIT 9107 845 Prochlorococcus Prochlorococcus marinus str. MIT 9201 841 Prochlorococcus Prochlorococcus sp. MIT 0601 574 Prochlorococcus Prochlorococcus marinus str. MIT 9313 71 Prochlorococcus Prochlorococcus marinus str. NATL2A 65 Prochlorococcus Prochlorococcus marinus str. NATL1A 59 Prochlorococcus Prochlorococcus sp. MIT 0801 23 Prochlorococcus Prochlorococcus marinus subsp. marinus str. CCMP1375 13 Prochlorococcus Prochlorococcus marinus str. AS9601 6 Prochlorococcus Prochlorococcus sp. MIT 0604 5 Prochlorococcus Prochlorococcus marinus subsp. pastoris str. CCMP1986 4 Prochlorococcus Prochlorococcus marinus str. MIT 9515 4 Prochlorococcus Prochlorococcus marinus str. MIT 9301 # 4029 reads uniquely mapped to Prochlorothrix (multi-hits among diff. species in Prochlorothrix allowed) 4029 Prochlorothrix Prochlorothrix hollandica PCC 9006 = CALU 1027 # 1724 reads uniquely mapped to Propionibacterium (multi-hits among diff. species in Propionibacterium allowed) 810 Propionibacterium Propionibacterium sp. oral taxon 193 474 Propionibacterium Propionibacterium freudenreichii subsp. shermanii 143 Propionibacterium Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 133 Propionibacterium Propionibacterium freudenreichii subsp. freudenreichii 117 Propionibacterium Propionibacterium sp. oral taxon 192 str. F0372 47 Propionibacterium Propionibacterium acidifaciens DSM 21887 # 172144 reads uniquely mapped to Proteus (multi-hits among diff. species in Proteus allowed) 88442 Proteus Proteus mirabilis 30712 Proteus Proteus mirabilis HI4320 30549 Proteus Proteus mirabilis BB2000 22441 Proteus Proteus vulgaris # 176033 reads uniquely mapped to Providencia (multi-hits among diff. species in Providencia allowed) 76865 Providencia Providencia stuartii 53653 Providencia Providencia rettgeri 25351 Providencia Providencia stuartii MRSN 2154 20164 Providencia Providencia sneebia DSM 19967 # 43344 reads uniquely mapped to Pseudacidovorax (multi-hits among diff. species in Pseudacidovorax allowed) 43344 Pseudacidovorax Pseudacidovorax intermedius # 8353 reads uniquely mapped to Pseudanabaena (multi-hits among diff. species in Pseudanabaena allowed) 5236 Pseudanabaena Pseudanabaena sp. PCC 7367 1680 Pseudanabaena Pseudanabaena biceps PCC 7429 1437 Pseudanabaena Pseudanabaena sp. PCC 6802 # 136939 reads uniquely mapped to Pseudoalteromonas (multi-hits among diff. species in Pseudoalteromonas allowed) 21077 Pseudoalteromonas Pseudoalteromonas luteoviolacea 19722 Pseudoalteromonas Pseudoalteromonas sp. '520P1 No. 423' 17556 Pseudoalteromonas Pseudoalteromonas tunicata D2 16244 Pseudoalteromonas Pseudoalteromonas sp. OCN003 10765 Pseudoalteromonas Pseudoalteromonas atlantica T6c 7695 Pseudoalteromonas Pseudoalteromonas rubra 6392 Pseudoalteromonas Pseudoalteromonas aliena 6293 Pseudoalteromonas Pseudoalteromonas haloplanktis TAC125 5823 Pseudoalteromonas Pseudoalteromonas translucida KMM 520 4881 Pseudoalteromonas Pseudoalteromonas sp. Bsw20308 4624 Pseudoalteromonas Pseudoalteromonas phenolica 3890 Pseudoalteromonas Pseudoalteromonas issachenkonii 3681 Pseudoalteromonas Pseudoalteromonas sp. SM9913 2252 Pseudoalteromonas Pseudoalteromonas ruthenica CP76 1909 Pseudoalteromonas Pseudoalteromonas shioyasakiensis 1772 Pseudoalteromonas Pseudoalteromonas spongiae UST010723-006 610 Pseudoalteromonas Pseudoalteromonas distincta 577 Pseudoalteromonas Pseudoalteromonas citrea DSM 8771 358 Pseudoalteromonas Pseudoalteromonas undina DSM 6065 333 Pseudoalteromonas NZ_LVCM01000056 293 Pseudoalteromonas Pseudoalteromonas prydzensis 74 Pseudoalteromonas NZ_LVCM01000057 59 Pseudoalteromonas NZ_LVCM01000065 37 Pseudoalteromonas NZ_LVCM01000055 15 Pseudoalteromonas NZ_LVCM01000052 4 Pseudoalteromonas NZ_LVCM01000059 2 Pseudoalteromonas NZ_LVCM01000019 1 Pseudoalteromonas NZ_LVCM01000017 # 50737 reads uniquely mapped to Pseudogulbenkiania (multi-hits among diff. species in Pseudogulbenkiania allowed) 50228 Pseudogulbenkiania Pseudogulbenkiania sp. NH8B 509 Pseudogulbenkiania Pseudogulbenkiania ferrooxidans 2002 # 119518 reads uniquely mapped to Pseudomonas (multi-hits among diff. species in Pseudomonas allowed) 14844 Pseudomonas Pseudomonas saudimassiliensis 13419 Pseudomonas Pseudomonas pelagia CL-AP6 12420 Pseudomonas Pseudomonas oryzihabitans 12139 Pseudomonas Pseudomonas psychrotolerans 10265 Pseudomonas Pseudomonas sp. S-6-2 5919 Pseudomonas Pseudomonas aeruginosa 5411 Pseudomonas Pseudomonas fluorescens NCIMB 11764 2601 Pseudomonas Pseudomonas balearica DSM 6083 1518 Pseudomonas Pseudomonas sp. CC6-YY-74 1504 Pseudomonas Pseudomonas putida 1188 Pseudomonas Pseudomonas fluorescens 1076 Pseudomonas Pseudomonas versuta 1002 Pseudomonas Pseudomonas stutzeri 999 Pseudomonas Pseudomonas fulva 12-X 991 Pseudomonas Pseudomonas mendocina S5.2 945 Pseudomonas Pseudomonas sp. LPH1 945 Pseudomonas Pseudomonas fragi 924 Pseudomonas Pseudomonas pseudoalcaligenes 886 Pseudomonas Pseudomonas pseudoalcaligenes CECT 5344 864 Pseudomonas Pseudomonas putida KT2440 862 Pseudomonas Pseudomonas luteola XLDN4-9 841 Pseudomonas Pseudomonas putida BIRD-1 836 Pseudomonas Pseudomonas mendocina NK-01 808 Pseudomonas Pseudomonas azotoformans 767 Pseudomonas Pseudomonas rhizosphaerae 695 Pseudomonas Pseudomonas citronellolis 681 Pseudomonas Pseudomonas chlororaphis 638 Pseudomonas Pseudomonas parafulva 565 Pseudomonas Pseudomonas cichorii JBC1 554 Pseudomonas Pseudomonas knackmussii B13 543 Pseudomonas Pseudomonas thermotolerans DSM 14292 466 Pseudomonas Pseudomonas syringae pv. actinidiae 398 Pseudomonas Pseudomonas sp. URMO17WK12:I11 385 Pseudomonas Pseudomonas alcaliphila JAB1 366 Pseudomonas Pseudomonas putida B6-2 358 Pseudomonas Pseudomonas mendocina ymp 344 Pseudomonas Pseudomonas brassicacearum 338 Pseudomonas Pseudomonas aeruginosa VRFPA04 329 Pseudomonas Pseudomonas sp. FGI182 311 Pseudomonas Pseudomonas frederiksbergensis 306 Pseudomonas Pseudomonas sp. JY-Q 301 Pseudomonas Pseudomonas putida GB-1 299 Pseudomonas Pseudomonas entomophila L48 297 Pseudomonas Pseudomonas koreensis 290 Pseudomonas Pseudomonas putida HB3267 289 Pseudomonas Pseudomonas corrugata 284 Pseudomonas Pseudomonas mosselii SJ10 280 Pseudomonas Pseudomonas sp. CCOS 191 276 Pseudomonas Pseudomonas putida JB 269 Pseudomonas Pseudomonas sp. VLB120 266 Pseudomonas Pseudomonas putida W619 263 Pseudomonas Pseudomonas resinovorans NBRC 106553 258 Pseudomonas Pseudomonas putida F1 256 Pseudomonas Pseudomonas putida ND6 256 Pseudomonas Pseudomonas putida S12 254 Pseudomonas Pseudomonas plecoglossicida 254 Pseudomonas Pseudomonas monteilii SB3078 249 Pseudomonas Pseudomonas putida S16 248 Pseudomonas Pseudomonas sp. ATCC 13867 246 Pseudomonas Pseudomonas stutzeri DSM 10701 244 Pseudomonas Pseudomonas putida SJTE-1 242 Pseudomonas Pseudomonas cremoricolorata 236 Pseudomonas Pseudomonas alcaligenes 236 Pseudomonas Pseudomonas fluorescens A506 234 Pseudomonas Pseudomonas stutzeri CCUG 29243 228 Pseudomonas Pseudomonas monteilii SB3101 224 Pseudomonas Pseudomonas stutzeri DSM 4166 223 Pseudomonas Pseudomonas stutzeri RCH2 219 Pseudomonas Pseudomonas stutzeri A1501 208 Pseudomonas Pseudomonas putida H8234 203 Pseudomonas Pseudomonas antarctica 202 Pseudomonas Pseudomonas chlororaphis subsp. aurantiaca 201 Pseudomonas Pseudomonas aeruginosa PA7 195 Pseudomonas Pseudomonas monteilii 192 Pseudomonas Pseudomonas sp. TCU-HL1 179 Pseudomonas Pseudomonas massiliensis 176 Pseudomonas Pseudomonas syringae pv. syringae B728a 170 Pseudomonas Pseudomonas sp. UW4 168 Pseudomonas NZ_CP008866 165 Pseudomonas NZ_CP008856 164 Pseudomonas Pseudomonas sp. StFLB209 162 Pseudomonas NZ_CP008859 161 Pseudomonas Pseudomonas sp. A3(2016) 159 Pseudomonas Pseudomonas alkylphenolica 158 Pseudomonas Pseudomonas aeruginosa YL84 158 Pseudomonas Pseudomonas mandelii JR-1 154 Pseudomonas Pseudomonas syringae pv. lapsa 152 Pseudomonas Pseudomonas aeruginosa SJTD-1 149 Pseudomonas NZ_CP008858 148 Pseudomonas Pseudomonas putida NBRC 14164 148 Pseudomonas Pseudomonas sp. MRSN12121 148 Pseudomonas Pseudomonas putida S13.1.2 147 Pseudomonas Pseudomonas flexibilis 145 Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 9853 145 Pseudomonas Pseudomonas veronii 144 Pseudomonas Pseudomonas sp. St29 142 Pseudomonas Pseudomonas savastanoi pv. phaseolicola 1448A 141 Pseudomonas NZ_CP008870 139 Pseudomonas NZ_CP008869 139 Pseudomonas Pseudomonas sp. GR 6-02 138 Pseudomonas NZ_CP008862 137 Pseudomonas Pseudomonas taeanensis MS-3 137 Pseudomonas Pseudomonas lutea 137 Pseudomonas NZ_CP008871 136 Pseudomonas Pseudomonas fluorescens PICF7 136 Pseudomonas Pseudomonas cerasi 135 Pseudomonas Pseudomonas aeruginosa UCBPP-PA14 133 Pseudomonas Pseudomonas aeruginosa M18 133 Pseudomonas Pseudomonas syringae UMAF0158 133 Pseudomonas NZ_CP008872 132 Pseudomonas NZ_CP008860 132 Pseudomonas Pseudomonas syringae pv. syringae B301D 129 Pseudomonas Pseudomonas aeruginosa NCGM2.S1 128 Pseudomonas Pseudomonas poae RE*1-1-14 127 Pseudomonas Pseudomonas aeruginosa DK2 126 Pseudomonas Pseudomonas aeruginosa LES431 126 Pseudomonas Pseudomonas fluorescens Pf0-1 125 Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18708 125 Pseudomonas Pseudomonas aeruginosa PA1R 121 Pseudomonas Pseudomonas aeruginosa LESB58 121 Pseudomonas Pseudomonas protegens 121 Pseudomonas Pseudomonas sp. Os17 121 Pseudomonas Pseudomonas protegens CHA0 121 Pseudomonas Pseudomonas brassicacearum subsp. brassicacearum NFM421 120 Pseudomonas NZ_CP008865 120 Pseudomonas Pseudomonas trivialis 119 Pseudomonas Pseudomonas protegens Cab57 118 Pseudomonas Pseudomonas syringae pv. actinidiae ICMP 18884 118 Pseudomonas Pseudomonas fluorescens SBW25 117 Pseudomonas NZ_CP008864 117 Pseudomonas Pseudomonas aeruginosa RP73 116 Pseudomonas Pseudomonas aeruginosa DSM 50071 = NBRC 12689 114 Pseudomonas Pseudomonas sp. DR 5-09 112 Pseudomonas Pseudomonas aeruginosa SCV20265 111 Pseudomonas [Pseudomonas syringae] pv. tomato str. DC3000 110 Pseudomonas Pseudomonas protegens Pf-5 110 Pseudomonas Pseudomonas fluorescens F113 109 Pseudomonas Pseudomonas aeruginosa DHS01 108 Pseudomonas Pseudomonas aeruginosa B136-33 107 Pseudomonas Pseudomonas aeruginosa MTB-1 106 Pseudomonas Pseudomonas amygdali pv. lachrymans 106 Pseudomonas Pseudomonas aeruginosa PAO1 104 Pseudomonas Pseudomonas syringae pv. syringae HS191 99 Pseudomonas Pseudomonas sp. TKP 96 Pseudomonas Pseudomonas aeruginosa PA1 92 Pseudomonas Pseudomonas syringae CC1557 77 Pseudomonas Pseudomonas azotifigens DSM 17556 74 Pseudomonas Pseudomonas sp. MS586 73 Pseudomonas Pseudomonas sp. TTU2014-080ASC 65 Pseudomonas Pseudomonas otitidis 56 Pseudomonas Pseudomonas xanthomarina 45 Pseudomonas Pseudomonas saudiphocaensis 23 Pseudomonas Pseudomonas aeruginosa AES-1R 23 Pseudomonas Pseudomonas fuscovaginae ICMP 5940 7 Pseudomonas Pseudomonas sp. S9 2 Pseudomonas Pseudomonas caeni DSM 24390 # 2781 reads uniquely mapped to Pseudoramibacter (multi-hits among diff. species in Pseudoramibacter allowed) 2781 Pseudoramibacter Pseudoramibacter alactolyticus ATCC 23263 # 14251 reads uniquely mapped to Pseudorhodobacter (multi-hits among diff. species in Pseudorhodobacter allowed) 4949 Pseudorhodobacter Pseudorhodobacter ferrugineus DSM 5888 4901 Pseudorhodobacter Pseudorhodobacter aquimaris 3747 Pseudorhodobacter Pseudorhodobacter psychrotolerans 654 Pseudorhodobacter Pseudorhodobacter wandonensis # 50685 reads uniquely mapped to Pseudorhodoferax (multi-hits among diff. species in Pseudorhodoferax allowed) 26008 Pseudorhodoferax Pseudorhodoferax sp. Leaf267 24677 Pseudorhodoferax Pseudorhodoferax sp. Leaf274 # 14523 reads uniquely mapped to Pseudovibrio (multi-hits among diff. species in Pseudovibrio allowed) 14523 Pseudovibrio NZ_BAZK01000052 # 88259 reads uniquely mapped to Psychrobacter (multi-hits among diff. species in Psychrobacter allowed) 17880 Psychrobacter Psychrobacter sp. AntiMn-1 14283 Psychrobacter Psychrobacter urativorans 10619 Psychrobacter Psychrobacter sp. DAB_AL43B 8263 Psychrobacter Psychrobacter aquaticus CMS 56 5822 Psychrobacter Psychrobacter sp. PRwf-1 4549 Psychrobacter Psychrobacter sp. P11F6 4055 Psychrobacter Psychrobacter sp. P2G3 3940 Psychrobacter Psychrobacter sp. P11G5 3935 Psychrobacter Psychrobacter alimentarius 3608 Psychrobacter Psychrobacter sp. G 3573 Psychrobacter Psychrobacter arcticus 273-4 3505 Psychrobacter Psychrobacter cryohalolentis K5 3176 Psychrobacter Psychrobacter sp. TB15 440 Psychrobacter Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152 332 Psychrobacter Psychrobacter sp. ENNN9_III 279 Psychrobacter Psychrobacter lutiphocae DSM 21542 # 94450 reads uniquely mapped to Psychromonas (multi-hits among diff. species in Psychromonas allowed) 54238 Psychromonas Psychromonas sp. CNPT3 32199 Psychromonas Psychromonas ingrahamii 37 7999 Psychromonas Psychromonas arctica DSM 14288 14 Psychromonas Psychromonas ossibalaenae ATCC BAA-1528 # 188435 reads uniquely mapped to Rahnella (multi-hits among diff. species in Rahnella allowed) 95331 Rahnella Rahnella aquatilis HX2 93104 Rahnella Rahnella sp. Y9602 # 53477 reads uniquely mapped to Ralstonia (multi-hits among diff. species in Ralstonia allowed) 26546 Ralstonia Ralstonia solanacearum 4390 Ralstonia Ralstonia solanacearum Po82 4079 Ralstonia Ralstonia solanacearum FJAT-1458 3866 Ralstonia Ralstonia solanacearum PSI07 3537 Ralstonia Ralstonia mannitolilytica 2820 Ralstonia Ralstonia solanacearum GMI1000 2817 Ralstonia Ralstonia insidiosa 2770 Ralstonia Ralstonia solanacearum OE1-1 1267 Ralstonia Ralstonia sp. PBA 693 Ralstonia Ralstonia pickettii 12J 692 Ralstonia Ralstonia pickettii 12D # 49217 reads uniquely mapped to Ramlibacter (multi-hits among diff. species in Ramlibacter allowed) 23083 Ramlibacter Ramlibacter sp. Leaf400 14343 Ramlibacter Ramlibacter tataouinensis 11791 Ramlibacter Ramlibacter tataouinensis TTB310 # 225379 reads uniquely mapped to Raoultella (multi-hits among diff. species in Raoultella allowed) 184389 Raoultella Raoultella ornithinolytica 40990 Raoultella Raoultella ornithinolytica B6 # 1299 reads uniquely mapped to Raphidiopsis (multi-hits among diff. species in Raphidiopsis allowed) 1299 Raphidiopsis Raphidiopsis brookii D9 # 109998 reads uniquely mapped to Reinekea (multi-hits among diff. species in Reinekea allowed) 109998 Reinekea Reinekea blandensis MED297 # 49230 reads uniquely mapped to Rhizobacter (multi-hits among diff. species in Rhizobacter allowed) 20862 Rhizobacter Rhizobacter sp. Root404 15341 Rhizobacter Rhizobacter sp. Root29 13027 Rhizobacter Rhizobacter sp. Root1221 # 27067 reads uniquely mapped to Rhizobium (multi-hits among diff. species in Rhizobium allowed) 11978 Rhizobium Rhizobium leucaenae USDA 9039 3576 Rhizobium Rhizobium phaseoli 1451 Rhizobium Rhizobium tropici CIAT 899 818 Rhizobium Rhizobium sp. BR10423 596 Rhizobium Rhizobium leguminosarum 498 Rhizobium Rhizobium etli 8C-3 457 Rhizobium Rhizobium sp. S41 409 Rhizobium Rhizobium sp. IRBG74 307 Rhizobium Rhizobium leguminosarum bv. trifolii CB782 301 Rhizobium Rhizobium gallicum bv. gallicum R602 299 Rhizobium Rhizobium leguminosarum bv. trifolii WSM1689 294 Rhizobium NZ_CP016286 294 Rhizobium Rhizobium etli 284 Rhizobium Rhizobium gallicum 282 Rhizobium Rhizobium sp. N324 280 Rhizobium Rhizobium sp. N871 279 Rhizobium Rhizobium leguminosarum bv. viciae 3841 275 Rhizobium Rhizobium sp. N113 274 Rhizobium Rhizobium etli bv. mimosae str. IE4771 273 Rhizobium Rhizobium sp. N621 271 Rhizobium Rhizobium sp. N1341 268 Rhizobium Rhizobium etli bv. mimosae str. Mim1 266 Rhizobium Rhizobium sp. N6212 263 Rhizobium Rhizobium etli CFN 42 262 Rhizobium Rhizobium leguminosarum bv. trifolii WSM1325 260 Rhizobium Rhizobium alamii 258 Rhizobium Rhizobium sp. N1314 250 Rhizobium Rhizobium etli CIAT 652 248 Rhizobium Rhizobium etli bv. phaseoli str. IE4803 247 Rhizobium Rhizobium sp. N741 245 Rhizobium Rhizobium sp. N731 244 Rhizobium Rhizobium leguminosarum bv. trifolii WSM2304 201 Rhizobium Rhizobium sp. NT-26 113 Rhizobium Rhizobium sp. LC145 99 Rhizobium Rhizobium selenitireducens ATCC BAA-1503 63 Rhizobium Rhizobium sp. YS-1r 62 Rhizobium Rhizobium undicola ORS 992 = ATCC 700741 49 Rhizobium Rhizobium mesoamericanum STM3625 38 Rhizobium Rhizobium sp. Root651 38 Rhizobium Rhizobium sp. Root1212 33 Rhizobium Rhizobium giardinii bv. giardinii H152 33 Rhizobium Rhizobium sp. PDO1-076 31 Rhizobium Rhizobium sp. Root1334 # 14858 reads uniquely mapped to Rhodobacter (multi-hits among diff. species in Rhodobacter allowed) 3380 Rhodobacter Rhodobacter sp. LPB0142 2315 Rhodobacter Rhodobacter sphaeroides ATCC 17025 1856 Rhodobacter Rhodobacter sphaeroides KD131 1843 Rhodobacter Candidatus Rhodobacter lobularis 1328 Rhodobacter Rhodobacter sphaeroides 1251 Rhodobacter Rhodobacter sp. SW2 1247 Rhodobacter Rhodobacter capsulatus SB 1003 943 Rhodobacter Rhodobacter sphaeroides ATCC 17029 695 Rhodobacter Rhodobacter sphaeroides 2.4.1 # 5367 reads uniquely mapped to Rhodococcus (multi-hits among diff. species in Rhodococcus allowed) 1272 Rhodococcus Rhodococcus sp. PBTS 1 1174 Rhodococcus Rhodococcus rhodnii LMG 5362 252 Rhodococcus Rhodococcus aetherivorans 216 Rhodococcus Rhodococcus sp. WB1 206 Rhodococcus Rhodococcus sp. 2G 185 Rhodococcus Rhodococcus pyridinivorans SB3094 166 Rhodococcus Rhodococcus sp. p52 165 Rhodococcus Rhodococcus hoagii 103S 117 Rhodococcus Rhodococcus erythropolis R138 114 Rhodococcus Rhodococcus erythropolis PR4 112 Rhodococcus Rhodococcus sp. B7740 106 Rhodococcus Rhodococcus erythropolis 105 Rhodococcus Rhodococcus sp. 008 100 Rhodococcus Rhodococcus fascians D188 97 Rhodococcus Rhodococcus jostii RHA1 95 Rhodococcus Rhodococcus sp. YL-1 95 Rhodococcus Rhodococcus sp. WMMA185 95 Rhodococcus Rhodococcus opacus PD630 93 Rhodococcus Rhodococcus sp. PBTS 2 92 Rhodococcus Rhodococcus sp. Leaf247 87 Rhodococcus Rhodococcus sp. MTM3W5.2 85 Rhodococcus Rhodococcus opacus 84 Rhodococcus Rhodococcus opacus B4 78 Rhodococcus Rhodococcus erythropolis CCM2595 50 Rhodococcus Rhodococcus fascians A44A 40 Rhodococcus Rhodococcus maanshanensis NBRC 100610 34 Rhodococcus Rhodococcus triatomae BKS 15-14 30 Rhodococcus Rhodococcus defluvii 22 Rhodococcus NZ_BBEW01000816 # 50793 reads uniquely mapped to Rhodoferax (multi-hits among diff. species in Rhodoferax allowed) 43509 Rhodoferax Rhodoferax ferrireducens T118 5305 Rhodoferax Rhodoferax saidenbachensis 1446 Rhodoferax Rhodoferax antarcticus 533 Rhodoferax Rhodoferax sp. DCY110 # 5257 reads uniquely mapped to Rhodoluna (multi-hits among diff. species in Rhodoluna allowed) 2741 Rhodoluna Rhodoluna lacicola 2516 Rhodoluna Candidatus Rhodoluna planktonica # 179871 reads uniquely mapped to Rhodopseudomonas (multi-hits among diff. species in Rhodopseudomonas allowed) 126837 Rhodopseudomonas Rhodopseudomonas palustris JSC-3b 47597 Rhodopseudomonas Rhodopseudomonas palustris 1193 Rhodopseudomonas Rhodopseudomonas palustris BisA53 1063 Rhodopseudomonas Rhodopseudomonas palustris BisB18 902 Rhodopseudomonas Rhodopseudomonas palustris DX-1 826 Rhodopseudomonas Rhodopseudomonas sp. AAP120 380 Rhodopseudomonas Rhodopseudomonas palustris BisB5 359 Rhodopseudomonas Rhodopseudomonas palustris CGA009 320 Rhodopseudomonas Rhodopseudomonas palustris TIE-1 203 Rhodopseudomonas Rhodopseudomonas palustris HaA2 191 Rhodopseudomonas Rhodopseudomonas sp. B29 # 18379 reads uniquely mapped to Rhodospirillum (multi-hits among diff. species in Rhodospirillum allowed) 8106 Rhodospirillum Rhodospirillum centenum SW 5171 Rhodospirillum Rhodospirillum rubrum F11 5102 Rhodospirillum Rhodospirillum rubrum ATCC 11170 # 2129 reads uniquely mapped to Richelia (multi-hits among diff. species in Richelia allowed) 2129 Richelia Richelia intracellularis HH01 # 4512 reads uniquely mapped to Rickettsia (multi-hits among diff. species in Rickettsia allowed) 754 Rickettsia Rickettsia massiliae str. AZT80 690 Rickettsia Rickettsia massiliae MTU5 314 Rickettsia Rickettsia prowazekii str. Breinl 308 Rickettsia Rickettsia prowazekii str. NMRC Madrid E 265 Rickettsia Rickettsia australis str. Cutlack 257 Rickettsia Rickettsia rhipicephali 228 Rickettsia Rickettsia rickettsii str. Brazil 215 Rickettsia Rickettsia asembonensis 214 Rickettsia Rickettsia helvetica C9P9 179 Rickettsia Rickettsia bellii OSU 85-389 164 Rickettsia Rickettsia canadensis str. McKiel 136 Rickettsia Rickettsia canadensis str. CA410 127 Rickettsia Rickettsia bellii RML369-C 115 Rickettsia Rickettsia monacensis 106 Rickettsia Rickettsia felis URRWXCal2 101 Rickettsia Rickettsia japonica YH 58 Rickettsia Rickettsia typhi str. B9991CWPP 43 Rickettsia Rickettsia typhi str. TH1527 41 Rickettsia Rickettsia typhi str. Wilmington 16 Rickettsia Rickettsia akari str. Hartford 12 Rickettsia Rickettsia rhipicephali str. 3-7-female6-CWPP 12 Rickettsia Rickettsia montanensis str. OSU 85-930 9 Rickettsia Rickettsia rickettsii 9 Rickettsia Rickettsia rickettsii str. R 8 Rickettsia Rickettsia slovaca str. D-CWPP 8 Rickettsia Rickettsia rickettsii str. Colombia 8 Rickettsia Rickettsia tamurae 8 Rickettsia Rickettsia prowazekii str. Madrid E 8 Rickettsia Rickettsia buchneri 7 Rickettsia Rickettsia slovaca 13-B 7 Rickettsia Rickettsia prowazekii str. Chernikova 6 Rickettsia Rickettsia amblyommatis str. GAT-30V 6 Rickettsia Rickettsia philipii str. 364D 6 Rickettsia Rickettsia prowazekii str. GvV257 5 Rickettsia Rickettsia rickettsii str. Iowa 5 Rickettsia Rickettsia rickettsii str. Hlp#2 5 Rickettsia Rickettsia prowazekii str. RpGvF24 5 Rickettsia Rickettsia prowazekii str. BuV67-CWPP 5 Rickettsia Rickettsia heilongjiangensis 054 5 Rickettsia Rickettsia prowazekii str. Rp22 4 Rickettsia Rickettsia rickettsii str. Arizona 4 Rickettsia Rickettsia amblyommatis str. Darkwater 4 Rickettsia Rickettsia prowazekii 4 Rickettsia Rickettsia rickettsii str. Hino 4 Rickettsia Rickettsia africae ESF-5 4 Rickettsia Rickettsia rickettsii str. 'Sheila Smith' 3 Rickettsia Rickettsia amblyommatis 3 Rickettsia Rickettsia conorii str. Malish 7 3 Rickettsia Rickettsia prowazekii str. Katsinyian 2 Rickettsia Rickettsia rickettsii str. Morgan 2 Rickettsia Rickettsia parkeri str. Portsmouth # 2493 reads uniquely mapped to Rivularia (multi-hits among diff. species in Rivularia allowed) 2493 Rivularia Rivularia sp. PCC 7116 # 25660 reads uniquely mapped to Rodentibacter (multi-hits among diff. species in Rodentibacter allowed) 25660 Rodentibacter Rodentibacter pneumotropicus DSM 21403 # 40655 reads uniquely mapped to Roseateles (multi-hits among diff. species in Roseateles allowed) 40655 Roseateles Roseateles depolymerans # 15406 reads uniquely mapped to Roseivivax (multi-hits among diff. species in Roseivivax allowed) 6877 Roseivivax Roseivivax atlanticus 5554 Roseivivax Roseivivax halodurans JCM 10272 2975 Roseivivax Roseivivax isoporae LMG 25204 # 32417 reads uniquely mapped to Roseobacter (multi-hits among diff. species in Roseobacter allowed) 18406 Roseobacter Roseobacter sp. SK209-2-6 6096 Roseobacter Roseobacter denitrificans OCh 114 3713 Roseobacter Roseobacter sp. GAI101 2215 Roseobacter Roseobacter sp. AzwK-3b 1169 Roseobacter Roseobacter litoralis Och 149 818 Roseobacter Roseobacter sp. CCS2 # 10141 reads uniquely mapped to Roseomonas (multi-hits among diff. species in Roseomonas allowed) 9557 Roseomonas Roseomonas gilardii 579 Roseomonas Roseomonas cervicalis ATCC 49957 5 Roseomonas Roseomonas aerilata DSM 19363 # 15149 reads uniquely mapped to Roseovarius (multi-hits among diff. species in Roseovarius allowed) 5307 Roseovarius Roseovarius indicus 3754 Roseovarius Roseovarius atlanticus 2327 Roseovarius Roseovarius sp. 217 2095 Roseovarius Roseovarius tolerans 1666 Roseovarius Roseovarius nubinhibens ISM # 2781 reads uniquely mapped to Rothia (multi-hits among diff. species in Rothia allowed) 2167 Rothia Rothia dentocariosa ATCC 17931 381 Rothia Rothia dentocariosa 123 Rothia Rothia mucilaginosa 110 Rothia Rothia mucilaginosa DY-18 # 12741 reads uniquely mapped to Rubellimicrobium (multi-hits among diff. species in Rubellimicrobium allowed) 9290 Rubellimicrobium Rubellimicrobium thermophilum DSM 16684 3451 Rubellimicrobium Rubellimicrobium mesophilum DSM 19309 # 120 reads uniquely mapped to Rubinisphaera (multi-hits among diff. species in Rubinisphaera allowed) 120 Rubinisphaera Rubinisphaera brasiliensis DSM 5305 # 2114 reads uniquely mapped to Rubritepida (multi-hits among diff. species in Rubritepida allowed) 2114 Rubritepida Rubritepida flocculans DSM 14296 # 10722 reads uniquely mapped to Ruminococcus (multi-hits among diff. species in Ruminococcus allowed) 6440 Ruminococcus Ruminococcus flavefaciens FD-1 1242 Ruminococcus Ruminococcus lactaris ATCC 29176 462 Ruminococcus Ruminococcus sp. NK3A76 450 Ruminococcus Ruminococcus sp. AT10 438 Ruminococcus Ruminococcus sp. HUN007 333 Ruminococcus Ruminococcus callidus ATCC 27760 314 Ruminococcus Ruminococcus champanellensis 18P13 = JCM 17042 292 Ruminococcus Ruminococcus flavefaciens ATCC 19208 188 Ruminococcus Ruminococcus albus 7 = DSM 20455 169 Ruminococcus Ruminococcus flavefaciens MC2020 149 Ruminococcus Ruminococcus faecis JCM 15917 127 Ruminococcus Ruminococcus bicirculans 75 Ruminococcus Ruminococcus sp. FC2018 43 Ruminococcus Ruminococcus gauvreauii DSM 19829 # 19652 reads uniquely mapped to Rummeliibacillus (multi-hits among diff. species in Rummeliibacillus allowed) 19652 Rummeliibacillus Rummeliibacillus stabekisii # 11643 reads uniquely mapped to Salinarimonas (multi-hits among diff. species in Salinarimonas allowed) 11643 Salinarimonas Salinarimonas rosea DSM 21201 # 90992 reads uniquely mapped to Salinivibrio (multi-hits among diff. species in Salinivibrio allowed) 90992 Salinivibrio Salinivibrio costicola subsp. costicola ATCC 33508 = LMG 11651 # 4792 reads uniquely mapped to Salisaeta (multi-hits among diff. species in Salisaeta allowed) 4792 Salisaeta Salisaeta longa DSM 21114 # 247085 reads uniquely mapped to Salmonella (multi-hits among diff. species in Salmonella allowed) 21102 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis 10963 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium 10944 Salmonella Salmonella enterica subsp. enterica serovar Heidelberg 10556 Salmonella Salmonella enterica subsp. enterica serovar Weltevreden 8934 Salmonella Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 8089 Salmonella Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001588 8073 Salmonella Salmonella enterica subsp. enterica serovar Saintpaul 6797 Salmonella Salmonella enterica subsp. enterica serovar Saintpaul str. SARA26 5752 Salmonella Salmonella enterica subsp. enterica serovar Albany str. ATCC 51960 5066 Salmonella Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 5026 Salmonella Salmonella enterica subsp. enterica serovar Cerro 4508 Salmonella Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 3272 Salmonella Salmonella enterica subsp. enterica serovar Newport 2880 Salmonella Salmonella enterica subsp. enterica serovar Infantis 2418 Salmonella Salmonella enterica subsp. diarizonae 2396 Salmonella Salmonella enterica subsp. enterica serovar Thompson 2210 Salmonella Salmonella enterica subsp. enterica serovar Java 2184 Salmonella NZ_CP012151 2152 Salmonella Salmonella enterica subsp. enterica serovar Typhi str. CT18 2094 Salmonella Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 2075 Salmonella Salmonella enterica subsp. enterica serovar Typhi str. Ty2 2054 Salmonella Salmonella enterica subsp. enterica serovar Typhi str. Ty21a 1934 Salmonella Salmonella enterica 1928 Salmonella Salmonella enterica subsp. enterica serovar Senftenberg 1876 Salmonella Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1927 1849 Salmonella Salmonella enterica subsp. enterica serovar Tennessee 1481 Salmonella Salmonella enterica subsp. enterica serovar Typhi 1471 Salmonella Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 1393 Salmonella Salmonella enterica subsp. enterica serovar Minnesota str. ATCC 49284 1340 Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A 1248 Salmonella Salmonella enterica subsp. enterica serovar Anatum 1225 Salmonella Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 1171 Salmonella Salmonella enterica subsp. enterica serovar Antsalova str. S01-0511 1152 Salmonella Salmonella enterica subsp. enterica serovar Djakarta str. S-1087 1152 Salmonella Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 1072 Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22513 1040 Salmonella Salmonella enterica subsp. enterica serovar Apapa str. SA20060561 1036 Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21538 1036 Salmonella Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 1002 Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 1001 Salmonella Salmonella enterica subsp. enterica serovar Newport str. SL254 988 Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 988 Salmonella Salmonella enterica subsp. enterica serovar Newport str. WA_14882 986 Salmonella Salmonella enterica subsp. enterica serovar Muenster str. 0315 958 Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 21550 950 Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22425 948 Salmonella Salmonella enterica subsp. enterica serovar Koessen str. S-1501 940 Salmonella Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 933 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1783 925 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1677 916 Salmonella Salmonella enterica subsp. enterica serovar Newport str. CVM 22462 915 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1728 913 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1765 912 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1727 897 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1175 894 Salmonella Salmonella enterica subsp. enterica serovar Newport str. Levine 15 889 Salmonella Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 884 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1735 878 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1676 858 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. ATCC BAA-1592 854 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1781 849 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. CDC 06-0532 839 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1766 826 Salmonella Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1736 824 Salmonella Salmonella enterica subsp. enterica serovar Wandsworth str. SA20092095 823 Salmonella Salmonella enterica subsp. enterica serovar Sloterdijk str. ATCC 15791 822 Salmonella Salmonella enterica subsp. arizonae serovar 62:z4,z23:- 783 Salmonella Salmonella bongori N268-08 781 Salmonella Salmonella enterica subsp. enterica serovar Bergen str. ST350 774 Salmonella Salmonella enterica subsp. enterica serovar Thompson str. ATCC 8391 769 Salmonella Salmonella enterica subsp. enterica serovar Bredeney str. CFSAN001080 762 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 77-1427 761 Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20 760 Salmonella Salmonella enterica subsp. enterica serovar Newport str. Levine 1 758 Salmonella Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720 739 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1896 733 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2010K-1587 731 Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 11511 727 Salmonella Salmonella enterica subsp. enterica serovar Weltevreden str. 1655 714 Salmonella Salmonella enterica subsp. enterica serovar Bardo 710 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 704 Salmonella Salmonella enterica subsp. arizonae serovar 62:z36:- str. RKS2983 699 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2009K-2059 693 Salmonella Salmonella bongori NCTC 12419 689 Salmonella Salmonella enterica subsp. enterica serovar Panama str. ATCC 7378 687 Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. SARA35 681 Salmonella Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 681 Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 665 Salmonella Salmonella bongori serovar 48:z41:-- str. RKS3044 657 Salmonella Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 650 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 649 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 648 Salmonella Salmonella enterica subsp. enterica serovar Johannesburg str. ST203 648 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2009K-1640 647 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 646 Salmonella Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 636 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. SARA13 635 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1808 635 Salmonella Salmonella enterica subsp. enterica serovar Abony str. 0014 632 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC H2662 631 Salmonella Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997 627 Salmonella Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078 627 Salmonella NZ_CP007540 624 Salmonella Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 622 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 614 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 610 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 607 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1880 603 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0968 603 Salmonella Salmonella enterica subsp. enterica serovar Moscow str. S-1843 602 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 599 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 599 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2011K-0870 599 Salmonella Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 599 Salmonella Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 591 Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 587 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090641 587 Salmonella Salmonella enterica subsp. enterica serovar Hillingdon str. N1529-D3 584 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2011K-1702 582 Salmonella Salmonella enterica subsp. enterica serovar Crossness str. 1422-74 578 Salmonella Salmonella enterica subsp. enterica 577 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. 798 576 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. DT104 575 Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 574 Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 573 Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. B182 571 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1899 570 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 569 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 569 Salmonella Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 568 Salmonella Salmonella enterica subsp. enterica serovar Manchester str. ST278 564 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. U288 560 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120005 560 Salmonella Salmonella enterica subsp. enterica serovar Agona str. 392869-2 548 Salmonella Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67 545 Salmonella Salmonella enterica subsp. enterica serovar Agona str. 24249 543 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 542 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110360 536 Salmonella Salmonella enterica subsp. enterica serovar Typhimurium str. L-3553 535 Salmonella Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 533 Salmonella Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 531 Salmonella Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 525 Salmonella Salmonella enterica subsp. enterica serovar Abaetetuba str. ATCC 35640 506 Salmonella Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903 501 Salmonella Salmonella enterica subsp. enterica serovar Yovokome str. S-1850 496 Salmonella Salmonella enterica subsp. enterica serovar Thompson str. RM6836 492 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100101 491 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111175 488 Salmonella Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 485 Salmonella Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 483 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110361 481 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090698 480 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120002 475 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SA19970510 473 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121179 473 Salmonella Salmonella enterica subsp. enterica serovar Agona str. SL483 471 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111174 462 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SA19994216 458 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110357 456 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SA19960848 456 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SA19981522 452 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354 451 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110359 450 Salmonella Salmonella enterica subsp. enterica serovar Nitra 450 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120008 448 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110358 448 Salmonella Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 447 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110356 447 Salmonella Salmonella enterica subsp. enterica serovar Borreze str. SA20041063 446 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110355 445 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121180 444 Salmonella Salmonella enterica subsp. enterica serovar Agona str. 460004 2-1 442 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SA20082034 440 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SA19981857 439 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 438 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121177 434 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SA19992322 430 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111095 430 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121175 426 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121178 422 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120200 422 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094352 421 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100325 420 Salmonella Salmonella enterica subsp. enterica serovar Choleraesuis 416 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SA19970769 415 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110221 411 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. SA19980677 405 Salmonella Salmonella enterica subsp. enterica serovar Gallinarum str. 9184 355 Salmonella Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120916 # 15407 reads uniquely mapped to Scytonema (multi-hits among diff. species in Scytonema allowed) 15407 Scytonema Scytonema tolypothrichoides VB-61278 # 1655 reads uniquely mapped to Sediminibacterium (multi-hits among diff. species in Sediminibacterium allowed) 1655 Sediminibacterium Sediminibacterium salmoneum NBRC 103935 # 7060 reads uniquely mapped to Selenomonas (multi-hits among diff. species in Selenomonas allowed) 3178 Selenomonas Selenomonas ruminantium subsp. lactilytica TAM6421 1369 Selenomonas Selenomonas sputigena ATCC 35185 1226 Selenomonas Selenomonas ruminantium AB3002 517 Selenomonas Selenomonas ruminantium 288 Selenomonas Selenomonas sp. oral taxon 920 147 Selenomonas Selenomonas noxia ATCC 43541 141 Selenomonas Selenomonas flueggei ATCC 43531 120 Selenomonas Selenomonas sp. oral taxon 478 64 Selenomonas Selenomonas sp. oral taxon 136 9 Selenomonas Selenomonas artemidis DSM 19719 1 Selenomonas Selenomonas bovis DSM 23594 # 213332 reads uniquely mapped to Serratia (multi-hits among diff. species in Serratia allowed) 22443 Serratia Serratia fonticola 20333 Serratia Serratia odorifera DSM 4582 18297 Serratia Serratia sp. ATCC 39006 16806 Serratia Serratia marcescens 14202 Serratia Serratia liquefaciens 13506 Serratia Serratia rubidaea 12402 Serratia Serratia plymuthica 8155 Serratia Serratia plymuthica PRI-2C 7488 Serratia Serratia marcescens FGI94 7349 Serratia Serratia liquefaciens ATCC 27592 6466 Serratia Serratia sp. AS12 6238 Serratia Serratia plymuthica AS9 6087 Serratia Serratia plymuthica 4Rx13 6000 Serratia Serratia plymuthica S13 5963 Serratia Serratia sp. AS13 4933 Serratia Serratia sp. SCBI 4905 Serratia Serratia sp. FS14 4854 Serratia Serratia symbiotica SCt-VLC 4674 Serratia Serratia marcescens subsp. marcescens Db11 4642 Serratia Serratia marcescens SM39 4455 Serratia Serratia proteamaculans 568 4245 Serratia Serratia marcescens WW4 4081 Serratia Serratia marcescens SMB2099 2827 Serratia Serratia sp. DD3 1981 Serratia Serratia sp. YD25 # 100287 reads uniquely mapped to Shewanella (multi-hits among diff. species in Shewanella allowed) 7475 Shewanella Shewanella amazonensis SB2B 7128 Shewanella Shewanella denitrificans OS217 5777 Shewanella Shewanella piezotolerans WP3 4592 Shewanella Shewanella halifaxensis HAW-EB4 4353 Shewanella Shewanella violacea DSS12 4255 Shewanella Shewanella sp. ANA-3 4215 Shewanella Shewanella sp. MR-4 4176 Shewanella Shewanella woodyi ATCC 51908 3913 Shewanella Shewanella sp. MR-7 3663 Shewanella Shewanella oneidensis MR-1 3545 Shewanella Shewanella pealeana ATCC 700345 2940 Shewanella Shewanella baltica OS155 2863 Shewanella Shewanella baltica OS117 2800 Shewanella Shewanella frigidimarina NCIMB 400 2772 Shewanella Shewanella baltica OS195 2755 Shewanella Shewanella baltica OS185 2727 Shewanella Shewanella baltica OS223 2705 Shewanella Shewanella baltica BA175 2644 Shewanella Shewanella loihica PV-4 2615 Shewanella Shewanella putrefaciens CN-32 2602 Shewanella Shewanella baltica OS678 2597 Shewanella Shewanella sp. W3-18-1 2475 Shewanella Shewanella mangrovi 2328 Shewanella Shewanella psychrophila 2285 Shewanella Shewanella putrefaciens 200 2189 Shewanella Shewanella algae 2057 Shewanella Shewanella sediminis HAW-EB3 1997 Shewanella Shewanella japonica 1908 Shewanella Shewanella marina JCM 15074 1673 Shewanella Shewanella benthica KT99 258 Shewanella Shewanella sp. P1-14-1 5 Shewanella Shewanella colwelliana ATCC 39565 # 248509 reads uniquely mapped to Shigella (multi-hits among diff. species in Shigella allowed) 41003 Shigella Shigella dysenteriae Sd197 20769 Shigella Shigella boydii CDC 3083-94 20016 Shigella Shigella sp. PAMC 28760 16008 Shigella Shigella flexneri 2002017 11345 Shigella Shigella flexneri 2a str. 2457T 11325 Shigella NZ_CP014099 10759 Shigella NZ_CP012735 9883 Shigella Shigella flexneri 5 str. 8401 9496 Shigella Shigella sonnei 53G 9066 Shigella NZ_CP012137 9008 Shigella Shigella sonnei Ss046 8991 Shigella NZ_CP010829 8957 Shigella NZ_CP007037 8919 Shigella NZ_CP012140 8888 Shigella NZ_LM651928 8865 Shigella Shigella flexneri Shi06HN006 8850 Shigella Shigella flexneri 2003036 8821 Shigella Shigella flexneri 2a str. 301 8774 Shigella NZ_CP011511 8743 Shigella Shigella boydii Sb227 14 Shigella NZ_CP012141 5 Shigella NZ_CP012139 4 Shigella NZ_CP012734 # 219097 reads uniquely mapped to Shimwellia (multi-hits among diff. species in Shimwellia allowed) 219097 Shimwellia Shimwellia blattae DSM 4481 = NBRC 105725 # 43714 reads uniquely mapped to Sideroxydans (multi-hits among diff. species in Sideroxydans allowed) 43714 Sideroxydans Sideroxydans lithotrophicus ES-1 # 60888 reads uniquely mapped to Silanimonas (multi-hits among diff. species in Silanimonas allowed) 60888 Silanimonas Silanimonas lenta DSM 16282 # 92517 reads uniquely mapped to Simiduia (multi-hits among diff. species in Simiduia allowed) 92517 Simiduia Simiduia agarivorans SA1 = DSM 21679 # 179333 reads uniquely mapped to Sodalis (multi-hits among diff. species in Sodalis allowed) 114634 Sodalis Sodalis praecaptivus 49687 Sodalis Sodalis glossinidius str. 'morsitans' 15012 Sodalis Candidatus Sodalis pierantonius str. SOPE # 45979 reads uniquely mapped to Solimonas (multi-hits among diff. species in Solimonas allowed) 35650 Solimonas Solimonas flava DSM 18980 10329 Solimonas Solimonas soli DSM 21787 # 2813 reads uniquely mapped to Solitalea (multi-hits among diff. species in Solitalea allowed) 2813 Solitalea Solitalea canadensis DSM 3403 # 23504 reads uniquely mapped to Sphingobacterium (multi-hits among diff. species in Sphingobacterium allowed) 11960 Sphingobacterium Sphingobacterium spiritivorum ATCC 33861 7246 Sphingobacterium Sphingobacterium sp. B29 2219 Sphingobacterium Sphingobacterium sp. T2 1039 Sphingobacterium Sphingobacterium sp. HMSC13C05 549 Sphingobacterium Sphingobacterium sp. ML3W 308 Sphingobacterium Sphingobacterium sp. 21 183 Sphingobacterium Sphingobacterium paucimobilis HER1398 # 31102 reads uniquely mapped to Sphingobium (multi-hits among diff. species in Sphingobium allowed) 10149 Sphingobium Sphingobium sp. C100 3031 Sphingobium Sphingobium yanoikuyae ATCC 51230 2391 Sphingobium Sphingobium sp. Leaf26 2380 Sphingobium Sphingobium xenophagum NBRC 107872 2290 Sphingobium Sphingobium sp. SYK-6 1989 Sphingobium Sphingobium sp. RAC03 1323 Sphingobium Sphingobium ummariense RL-3 1167 Sphingobium Sphingobium lactosutens DS20 1077 Sphingobium Sphingobium sp. YBL2 1019 Sphingobium Sphingobium sp. EP60837 971 Sphingobium Sphingobium herbicidovorans NBRC 16415 756 Sphingobium Sphingobium sp. MI1205 595 Sphingobium Sphingobium baderi LL03 498 Sphingobium Sphingobium chlorophenolicum L-1 474 Sphingobium Sphingobium indicum B90A 396 Sphingobium Sphingobium sp. TKS 379 Sphingobium Sphingobium japonicum UT26S 217 Sphingobium Sphingobium baderi # 68297 reads uniquely mapped to Sphingomonas (multi-hits among diff. species in Sphingomonas allowed) 40914 Sphingomonas Sphingomonas sp. Leaf33 12360 Sphingomonas Sphingomonas sp. Leaf339 3404 Sphingomonas Sphingomonas sp. LM7 2378 Sphingomonas Sphingomonas sp. LK11 1577 Sphingomonas Sphingomonas jaspsi DSM 18422 921 Sphingomonas Sphingomonas astaxanthinifaciens DSM 22298 545 Sphingomonas Sphingomonas hengshuiensis 521 Sphingomonas Sphingomonas sp. ERG5 484 Sphingomonas Sphingomonas changbaiensis NBRC 104936 463 Sphingomonas Sphingomonas sanxanigenens DSM 19645 = NX02 412 Sphingomonas Sphingomonas sp. JJ-A5 372 Sphingomonas Sphingomonas echinoides ATCC 14820 318 Sphingomonas Sphingomonas panacis 255 Sphingomonas Sphingomonas sp. Leaf357 236 Sphingomonas Sphingomonas sp. Leaf17 195 Sphingomonas Sphingomonas sp. MM-1 194 Sphingomonas Sphingomonas taxi 190 Sphingomonas Sphingomonas haloaromaticamans 186 Sphingomonas Sphingomonas wittichii 180 Sphingomonas Sphingomonas wittichii RW1 164 Sphingomonas Sphingomonas sp. Leaf231 160 Sphingomonas Sphingomonas phyllosphaerae FA2 147 Sphingomonas Sphingomonas sp. URHD0057 147 Sphingomonas Sphingomonas sp. NIC1 146 Sphingomonas Sphingomonas sp. WG 137 Sphingomonas Sphingomonas sp. PR090111-T3T-6A 127 Sphingomonas Sphingomonas melonis TY 125 Sphingomonas Sphingomonas sp. Leaf412 124 Sphingomonas Sphingomonas elodea ATCC 31461 117 Sphingomonas Sphingomonas sp. Root241 115 Sphingomonas Sphingomonas sp. Leaf11 114 Sphingomonas Sphingomonas sp. Mn802worker 91 Sphingomonas Sphingomonas sp. Leaf34 88 Sphingomonas Sphingomonas sp. Ag1 86 Sphingomonas Sphingomonas sp. 37zxx 83 Sphingomonas Sphingomonas koreensis 78 Sphingomonas Sphingomonas paucimobilis NBRC 13935 44 Sphingomonas Sphingomonas sp. SRS2 44 Sphingomonas Sphingomonas sp. Leaf343 35 Sphingomonas Sphingomonas sp. KC8 20 Sphingomonas Sphingomonas sp. PAMC 26617 # 12025 reads uniquely mapped to Spirochaeta (multi-hits among diff. species in Spirochaeta allowed) 5146 Spirochaeta Spirochaeta alkalica DSM 8900 2915 Spirochaeta Spirochaeta africana DSM 8902 1306 Spirochaeta Spirochaeta cellobiosiphila DSM 17781 1166 Spirochaeta Spirochaeta lutea 997 Spirochaeta Spirochaeta thermophila DSM 6578 495 Spirochaeta Spirochaeta thermophila DSM 6192 # 11618 reads uniquely mapped to Spiroplasma (multi-hits among diff. species in Spiroplasma allowed) 2897 Spiroplasma Spiroplasma chrysopicola DF-1 2892 Spiroplasma Spiroplasma syrphidicola EA-1 971 Spiroplasma Spiroplasma mirum ATCC 29335 602 Spiroplasma Spiroplasma sabaudiense Ar-1343 497 Spiroplasma Spiroplasma eriocheiris CCTCC M 207170 496 Spiroplasma Spiroplasma eriocheiris 491 Spiroplasma Spiroplasma turonicum 490 Spiroplasma Spiroplasma atrichopogonis 417 Spiroplasma Spiroplasma apis B31 295 Spiroplasma Spiroplasma melliferum KC3 294 Spiroplasma Spiroplasma sp. NBRC 100390 268 Spiroplasma Spiroplasma poulsonii 251 Spiroplasma Spiroplasma litorale 245 Spiroplasma Spiroplasma sp. TU-14 118 Spiroplasma Spiroplasma kunkelii CR2-3x 116 Spiroplasma Spiroplasma helicoides 99 Spiroplasma Spiroplasma taiwanense CT-1 71 Spiroplasma Spiroplasma cantharicola 47 Spiroplasma Spiroplasma diminutum CUAS-1 40 Spiroplasma Spiroplasma culicicola AES-1 21 Spiroplasma Spiroplasma citri # 1821 reads uniquely mapped to Spirosoma (multi-hits among diff. species in Spirosoma allowed) 677 Spirosoma Spirosoma rigui 371 Spirosoma Spirosoma aerolatum 315 Spirosoma Spirosoma luteum DSM 19990 231 Spirosoma Spirosoma montaniterrae 134 Spirosoma Spirosoma panaciterrae DSM 21099 93 Spirosoma Spirosoma radiotolerans # 68928 reads uniquely mapped to Spongiibacter (multi-hits among diff. species in Spongiibacter allowed) 36269 Spongiibacter Spongiibacter tropicus DSM 19543 22068 Spongiibacter Spongiibacter sp. IMCC21906 10591 Spongiibacter Spongiibacter marinus DSM 19753 # 3121 reads uniquely mapped to Sporichthya (multi-hits among diff. species in Sporichthya allowed) 3121 Sporichthya Sporichthya polymorpha DSM 43042 # 2171 reads uniquely mapped to Sporocytophaga (multi-hits among diff. species in Sporocytophaga allowed) 2171 Sporocytophaga Sporocytophaga myxococcoides DSM 11118 # 8404 reads uniquely mapped to Stanieria (multi-hits among diff. species in Stanieria allowed) 8404 Stanieria Stanieria cyanosphaera PCC 7437 # 29688 reads uniquely mapped to Staphylococcus (multi-hits among diff. species in Staphylococcus allowed) 12929 Staphylococcus Staphylococcus aureus subsp. aureus ST772-MRSA-V 4994 Staphylococcus Staphylococcus aureus 967 Staphylococcus Staphylococcus equorum 937 Staphylococcus Staphylococcus saprophyticus 856 Staphylococcus Staphylococcus aureus subsp. aureus 622 Staphylococcus Staphylococcus xylosus 581 Staphylococcus Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 548 Staphylococcus Staphylococcus hyicus 491 Staphylococcus Staphylococcus agnetis 449 Staphylococcus Staphylococcus condimenti 404 Staphylococcus Staphylococcus schleiferi 377 Staphylococcus Staphylococcus carnosus subsp. carnosus TM300 348 Staphylococcus Staphylococcus aureus 08BA02176 320 Staphylococcus Staphylococcus simulans 291 Staphylococcus Staphylococcus aureus subsp. aureus ST228 281 Staphylococcus Staphylococcus sp. AntiMn-1 248 Staphylococcus Staphylococcus carnosus 246 Staphylococcus Staphylococcus succinus 232 Staphylococcus Staphylococcus warneri SG1 221 Staphylococcus Staphylococcus pseudintermedius 200 Staphylococcus Staphylococcus aureus subsp. aureus Tager 104 155 Staphylococcus Staphylococcus sciuri subsp. sciuri 127 Staphylococcus Staphylococcus lugdunensis 117 Staphylococcus Staphylococcus epidermidis 104 Staphylococcus Staphylococcus vitulinus F1028 91 Staphylococcus Staphylococcus pseudintermedius HKU10-03 83 Staphylococcus Staphylococcus cohnii subsp. cohnii 82 Staphylococcus Staphylococcus lentus F1142 74 Staphylococcus Staphylococcus haemolyticus JCSC1435 71 Staphylococcus Staphylococcus pseudintermedius ED99 64 Staphylococcus Staphylococcus haemolyticus 64 Staphylococcus Staphylococcus epidermidis RP62A 61 Staphylococcus Staphylococcus epidermidis ATCC 12228 58 Staphylococcus Staphylococcus hominis subsp. hominis C80 58 Staphylococcus Staphylococcus capitis subsp. capitis 57 Staphylococcus Staphylococcus aureus subsp. aureus ST398 53 Staphylococcus Staphylococcus capitis 50 Staphylococcus Staphylococcus aureus USA300-ISMMS1 50 Staphylococcus Staphylococcus aureus subsp. aureus LGA251 49 Staphylococcus Staphylococcus aureus subsp. aureus COL 49 Staphylococcus Staphylococcus aureus subsp. aureus DSM 20231 47 Staphylococcus Staphylococcus aureus subsp. aureus ED98 46 Staphylococcus Staphylococcus pasteuri SP1 46 Staphylococcus Staphylococcus epidermidis PM221 46 Staphylococcus Staphylococcus aureus subsp. aureus Mu50 45 Staphylococcus Staphylococcus pettenkoferi VCU012 45 Staphylococcus Staphylococcus aureus subsp. aureus SA957 45 Staphylococcus Staphylococcus aureus subsp. aureus TCH60 45 Staphylococcus Staphylococcus aureus subsp. aureus str. JKD6008 45 Staphylococcus Staphylococcus aureus subsp. aureus T0131 44 Staphylococcus Staphylococcus lugdunensis HKU09-01 43 Staphylococcus Staphylococcus aureus subsp. aureus SA268 43 Staphylococcus Staphylococcus aureus subsp. aureus MSSA476 41 Staphylococcus Staphylococcus aureus subsp. aureus str. Newman 41 Staphylococcus Staphylococcus aureus subsp. aureus USA300_TCH1516 41 Staphylococcus Staphylococcus aureus subsp. aureus JH9 41 Staphylococcus Staphylococcus aureus subsp. aureus ECT-R 2 40 Staphylococcus Staphylococcus aureus subsp. aureus JH1 38 Staphylococcus Staphylococcus aureus subsp. aureus M013 38 Staphylococcus Staphylococcus aureus subsp. aureus MW2 37 Staphylococcus Staphylococcus aureus subsp. aureus USA300_FPR3757 37 Staphylococcus Staphylococcus aureus subsp. aureus Z172 37 Staphylococcus Staphylococcus aureus subsp. aureus HO 5096 0412 36 Staphylococcus Staphylococcus aureus Bmb9393 36 Staphylococcus Staphylococcus aureus subsp. aureus 55/2053 36 Staphylococcus Staphylococcus aureus CA-347 35 Staphylococcus Staphylococcus aureus subsp. aureus NCTC 8325 34 Staphylococcus Staphylococcus aureus subsp. aureus SA40 34 Staphylococcus Staphylococcus aureus subsp. aureus N315 34 Staphylococcus Staphylococcus aureus subsp. aureus JKD6159 33 Staphylococcus Staphylococcus aureus subsp. aureus ED133 33 Staphylococcus Staphylococcus aureus 04-02981 33 Staphylococcus Staphylococcus aureus subsp. aureus 6850 32 Staphylococcus Staphylococcus aureus subsp. aureus MRSA252 31 Staphylococcus Staphylococcus aureus RF122 30 Staphylococcus Staphylococcus argenteus 29 Staphylococcus Staphylococcus arlettae CVD059 29 Staphylococcus Staphylococcus aureus subsp. aureus 11819-97 28 Staphylococcus Staphylococcus aureus subsp. aureus Mu3 27 Staphylococcus Staphylococcus aureus subsp. aureus VC40 26 Staphylococcus Staphylococcus microti 26 Staphylococcus Staphylococcus gallinarum 26 Staphylococcus Staphylococcus lugdunensis N920143 24 Staphylococcus Staphylococcus aureus subsp. aureus TW20 19 Staphylococcus Staphylococcus aureus subsp. aureus CN1 16 Staphylococcus Staphylococcus simiae CCM 7213 6 Staphylococcus Staphylococcus auricularis 5 Staphylococcus Staphylococcus massiliensis CCUG 55927 # 71973 reads uniquely mapped to Stenotrophomonas (multi-hits among diff. species in Stenotrophomonas allowed) 17990 Stenotrophomonas Stenotrophomonas maltophilia 12663 Stenotrophomonas Stenotrophomonas panacihumi 9997 Stenotrophomonas Stenotrophomonas sp. KCTC 12332 5774 Stenotrophomonas Stenotrophomonas acidaminiphila 4144 Stenotrophomonas Stenotrophomonas rhizophila 3645 Stenotrophomonas Stenotrophomonas maltophilia JV3 3580 Stenotrophomonas Stenotrophomonas maltophilia K279a 3496 Stenotrophomonas Stenotrophomonas maltophilia D457 2601 Stenotrophomonas Stenotrophomonas nitritireducens 2304 Stenotrophomonas Stenotrophomonas maltophilia R551-3 2115 Stenotrophomonas Stenotrophomonas sp. LM091 1469 Stenotrophomonas Stenotrophomonas daejeonensis 1003 Stenotrophomonas Stenotrophomonas koreensis 751 Stenotrophomonas Stenotrophomonas ginsengisoli 441 Stenotrophomonas Stenotrophomonas chelatiphaga # 1414 reads uniquely mapped to Streptobacillus (multi-hits among diff. species in Streptobacillus allowed) 1414 Streptobacillus Streptobacillus moniliformis DSM 12112 # 20018 reads uniquely mapped to Streptococcus (multi-hits among diff. species in Streptococcus allowed) 1514 Streptococcus Streptococcus pyogenes 1415 Streptococcus Streptococcus pneumoniae 478 Streptococcus Streptococcus thermophilus 471 Streptococcus Streptococcus pantholopis 401 Streptococcus Streptococcus agalactiae 394 Streptococcus Streptococcus sanguinis SK36 352 Streptococcus Streptococcus anginosus 336 Streptococcus Streptococcus oralis 298 Streptococcus Streptococcus anginosus subsp. whileyi MAS624 294 Streptococcus Streptococcus gordonii 291 Streptococcus Streptococcus sp. oral taxon 431 289 Streptococcus Streptococcus salivarius 286 Streptococcus Streptococcus himalayensis 284 Streptococcus Streptococcus mitis 281 Streptococcus Streptococcus pneumoniae TIGR4 270 Streptococcus Streptococcus pneumoniae Taiwan19F-14 266 Streptococcus Streptococcus pneumoniae JJA 264 Streptococcus Streptococcus pneumoniae D39 263 Streptococcus Streptococcus pneumoniae P1031 263 Streptococcus Streptococcus pneumoniae ATCC 700669 262 Streptococcus Streptococcus pneumoniae 70585 260 Streptococcus Streptococcus pneumoniae ST556 259 Streptococcus Streptococcus pneumoniae 670-6B 256 Streptococcus Streptococcus pneumoniae SPN034183 256 Streptococcus Streptococcus gordonii str. Challis substr. CH1 253 Streptococcus Streptococcus pneumoniae CGSP14 244 Streptococcus Streptococcus pneumoniae Hungary19A-6 243 Streptococcus Streptococcus pneumoniae SPN994038 242 Streptococcus Streptococcus pneumoniae gamPNI0373 240 Streptococcus Streptococcus pneumoniae INV200 239 Streptococcus Streptococcus pneumoniae INV104 238 Streptococcus Streptococcus pneumoniae SPN994039 237 Streptococcus Streptococcus pneumoniae G54 236 Streptococcus Streptococcus pneumoniae SPN034156 233 Streptococcus Streptococcus pneumoniae AP200 230 Streptococcus Streptococcus pneumoniae R6 228 Streptococcus Streptococcus pneumoniae OXC141 215 Streptococcus Streptococcus constellatus subsp. pharyngis C232 206 Streptococcus Streptococcus pneumoniae TCH8431/19A 206 Streptococcus Streptococcus constellatus subsp. pharyngis C1050 191 Streptococcus Streptococcus constellatus subsp. pharyngis C818 188 Streptococcus Streptococcus gallolyticus 171 Streptococcus Streptococcus pneumoniae SPN033038 160 Streptococcus Streptococcus macacae NCTC 11558 158 Streptococcus Streptococcus mutans GS-5 150 Streptococcus Streptococcus intermedius C270 144 Streptococcus Streptococcus halotolerans 143 Streptococcus Streptococcus mutans UA159 142 Streptococcus Streptococcus intermedius JTH08 142 Streptococcus Streptococcus intermedius B196 141 Streptococcus Streptococcus sp. X13SY08 129 Streptococcus Streptococcus suis 124 Streptococcus Streptococcus criceti HS-6 124 Streptococcus Streptococcus mutans UA159-FR 117 Streptococcus Streptococcus equi subsp. equi 4047 112 Streptococcus Streptococcus pneumoniae SPN032672 107 Streptococcus Streptococcus sp. I-P16 101 Streptococcus Streptococcus anginosus C1051 99 Streptococcus Streptococcus mutans 99 Streptococcus Streptococcus massiliensis DSM 18628 98 Streptococcus Streptococcus pseudoporcinus LQ 940-04 95 Streptococcus Streptococcus anginosus C238 91 Streptococcus Streptococcus marmotae 90 Streptococcus Streptococcus agalactiae NEM316 87 Streptococcus Streptococcus urinalis 2285-97 86 Streptococcus Streptococcus pseudopneumoniae IS7493 82 Streptococcus Streptococcus pyogenes JRS4 82 Streptococcus Streptococcus mutans NN2025 82 Streptococcus Streptococcus equi subsp. zooepidemicus ATCC 35246 79 Streptococcus Streptococcus cristatus AS 1.3089 78 Streptococcus Streptococcus equi subsp. zooepidemicus MGCS10565 77 Streptococcus Streptococcus pyogenes MGAS8232 74 Streptococcus Streptococcus mutans LJ23 73 Streptococcus Streptococcus iniae 69 Streptococcus Streptococcus sp. FDAARGOS_192 68 Streptococcus Streptococcus pyogenes MGAS9429 61 Streptococcus Streptococcus pyogenes MGAS10750 60 Streptococcus Streptococcus pyogenes MGAS6180 60 Streptococcus Streptococcus oralis subsp. tigurinus AZ_3a 60 Streptococcus Streptococcus pyogenes M1 GAS 59 Streptococcus Streptococcus pyogenes MGAS10270 57 Streptococcus Streptococcus pyogenes MGAS315 57 Streptococcus Streptococcus pyogenes A20 55 Streptococcus Streptococcus equi subsp. zooepidemicus CY 54 Streptococcus Streptococcus pyogenes MGAS5005 54 Streptococcus Streptococcus pyogenes NZ131 52 Streptococcus Streptococcus pyogenes MGAS2096 51 Streptococcus Streptococcus entericus DSM 14446 51 Streptococcus Streptococcus pyogenes MGAS1882 49 Streptococcus Streptococcus pyogenes MGAS10394 47 Streptococcus Streptococcus pyogenes M1 476 47 Streptococcus Streptococcus ratti FA-1 = DSM 20564 47 Streptococcus Streptococcus parauberis KCTC 11537 46 Streptococcus NZ_CP014138 45 Streptococcus Streptococcus salivarius JIM8777 45 Streptococcus Streptococcus ferus DSM 20646 44 Streptococcus Streptococcus pyogenes Alab49 44 Streptococcus Streptococcus thermophilus JIM 8232 43 Streptococcus Streptococcus pyogenes MGAS15252 42 Streptococcus Streptococcus pyogenes HSC5 40 Streptococcus Streptococcus thermophilus LMG 18311 39 Streptococcus Streptococcus thermophilus ASCC 1275 38 Streptococcus Streptococcus dysgalactiae subsp. equisimilis RE378 36 Streptococcus Streptococcus thermophilus MN-ZLW-002 36 Streptococcus Streptococcus thermophilus CNRZ1066 35 Streptococcus Streptococcus mitis B6 34 Streptococcus Streptococcus pneumoniae SPNA45 34 Streptococcus Streptococcus marimammalium DSM 18627 34 Streptococcus Streptococcus dysgalactiae subsp. equisimilis GGS_124 33 Streptococcus Streptococcus uberis 0140J 33 Streptococcus Streptococcus dysgalactiae subsp. equisimilis ATCC 12394 32 Streptococcus Streptococcus orisratti DSM 15617 32 Streptococcus Streptococcus pyogenes STAB902 31 Streptococcus Streptococcus oralis Uo5 31 Streptococcus Streptococcus thermophilus LMD-9 31 Streptococcus Streptococcus salivarius CCHSS3 29 Streptococcus Streptococcus thermophilus ND03 29 Streptococcus Streptococcus merionis DSM 19192 28 Streptococcus Streptococcus dysgalactiae subsp. equisimilis AC-2713 28 Streptococcus Streptococcus henryi DSM 19005 28 Streptococcus Streptococcus pyogenes SSI-1 28 Streptococcus Streptococcus minor DSM 17118 26 Streptococcus Streptococcus equi subsp. zooepidemicus 25 Streptococcus Streptococcus pyogenes str. Manfredo 24 Streptococcus Streptococcus sp. A12 24 Streptococcus Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 23 Streptococcus Streptococcus caballi DSM 19004 20 Streptococcus Streptococcus infantarius 19 Streptococcus Streptococcus agalactiae CNCTC 10/84 19 Streptococcus Streptococcus sobrinus DSM 20742 = ATCC 33478 18 Streptococcus Streptococcus porci DSM 23759 18 Streptococcus Streptococcus plurextorum DSM 22810 17 Streptococcus Streptococcus didelphis DSM 15616 16 Streptococcus Streptococcus agalactiae 2603V/R 14 Streptococcus Streptococcus parasanguinis ATCC 15912 14 Streptococcus Streptococcus parasanguinis FW213 14 Streptococcus Streptococcus gallolyticus UCN34 13 Streptococcus Streptococcus agalactiae GD201008-001 13 Streptococcus Streptococcus sp. I-G2 13 Streptococcus Streptococcus agalactiae ILRI005 12 Streptococcus Streptococcus macedonicus ACA-DC 198 12 Streptococcus Streptococcus agalactiae A909 12 Streptococcus Streptococcus lutetiensis 033 11 Streptococcus Streptococcus agalactiae 09mas018883 11 Streptococcus Streptococcus infantis ATCC 700779 11 Streptococcus Streptococcus gallolyticus subsp. gallolyticus DSM 16831 10 Streptococcus Streptococcus infantarius subsp. infantarius CJ18 10 Streptococcus Streptococcus agalactiae COH1 9 Streptococcus Streptococcus suis ST1 8 Streptococcus Streptococcus suis SC070731 7 Streptococcus Streptococcus ictaluri 707-05 6 Streptococcus Streptococcus suis A7 6 Streptococcus Streptococcus suis GZ1 6 Streptococcus Streptococcus ovis DSM 16829 6 Streptococcus Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 6 Streptococcus Streptococcus suis JS14 6 Streptococcus Streptococcus suis ST3 5 Streptococcus Streptococcus suis BM407 5 Streptococcus Streptococcus suis 6407 5 Streptococcus Streptococcus pasteurianus ATCC 43144 5 Streptococcus Streptococcus suis T15 5 Streptococcus Streptococcus suis SC84 4 Streptococcus Streptococcus suis YB51 3 Streptococcus Streptococcus suis SS12 3 Streptococcus Streptococcus suis P1/7 3 Streptococcus Streptococcus suis TL13 2 Streptococcus Streptococcus suis D12 2 Streptococcus Streptococcus suis S735 2 Streptococcus Streptococcus suis 05HAS68 # 7182 reads uniquely mapped to Streptomyces (multi-hits among diff. species in Streptomyces allowed) 3781 Streptomyces Streptomyces leeuwenhoekii 428 Streptomyces Streptomyces xiamenensis 272 Streptomyces Streptomyces sp. CNQ-509 149 Streptomyces Streptomyces sp. MJM8645 142 Streptomyces Streptomyces viridifaciens 118 Streptomyces Streptomyces specialis 103 Streptomyces Streptomyces albus 101 Streptomyces Streptomyces griseoplanus 85 Streptomyces Streptomyces qinglanensis 70 Streptomyces Streptomyces sp. CCM_MD2014 62 Streptomyces Streptomyces autolyticus 58 Streptomyces Streptomyces sp. TN58 53 Streptomyces Streptomyces pactum 51 Streptomyces Streptomyces glaucescens 50 Streptomyces Streptomyces yeochonensis CN732 49 Streptomyces Streptomyces reticuli 44 Streptomyces Streptomyces sp. WMMB 714 42 Streptomyces Streptomyces iranensis 40 Streptomyces Streptomyces lividans TK24 38 Streptomyces Streptomyces sp. fd1-xmd 38 Streptomyces Streptomyces albus J1074 36 Streptomyces Streptomyces lydicus 36 Streptomyces Streptomyces sp. 3211 36 Streptomyces Streptomyces sp. SAT1 34 Streptomyces Streptomyces sp. TAA204 34 Streptomyces Streptomyces sp. 4F 34 Streptomyces Streptomyces ambofaciens 34 Streptomyces Streptomyces sampsonii 33 Streptomyces Streptomyces silaceus 33 Streptomyces Streptomyces hygroscopicus 33 Streptomyces Streptomyces roseochromogenus subsp. oscitans DS 12.976 33 Streptomyces Streptomyces sp. SBT349 33 Streptomyces Streptomyces avicenniae 32 Streptomyces Streptomyces ipomoeae 91-03 31 Streptomyces Streptomyces violaceusniger Tu 4113 31 Streptomyces Streptomyces puniciscabiei 31 Streptomyces Streptomyces parvulus 30 Streptomyces Streptomyces caatingaensis 29 Streptomyces Streptomyces sp. CdTB01 28 Streptomyces Streptomyces bingchenggensis BCW-1 28 Streptomyces Streptomyces nodosus 28 Streptomyces Streptomyces cyaneogriseus subsp. noncyanogenus 27 Streptomyces Streptomyces sp. FR-008 27 Streptomyces Streptomyces sp. Mg1 27 Streptomyces Streptomyces collinus Tu 365 24 Streptomyces Streptomyces ambofaciens ATCC 23877 23 Streptomyces Streptomyces hygroscopicus subsp. jinggangensis 5008 23 Streptomyces Streptomyces cattleya NRRL 8057 = DSM 46488 23 Streptomyces Streptomyces coelicolor A3(2) 23 Streptomyces Streptomyces vietnamensis 21 Streptomyces Streptomyces sp. NRRL B-24484 20 Streptomyces Streptomyces rubrolavendulae 20 Streptomyces Streptomyces hygroscopicus subsp. jinggangensis TL01 17 Streptomyces Streptomyces clavuligerus 16 Streptomyces Streptomyces scabrisporus DSM 41855 16 Streptomyces Streptomyces venezuelae 15 Streptomyces Streptomyces purpeofuscus 15 Streptomyces Streptomyces sp. CNH287 14 Streptomyces Streptomyces sp. NRRL S-87 13 Streptomyces Streptomyces albus subsp. albus 12 Streptomyces Streptomyces sp. NRRL F-5126 12 Streptomyces Streptomyces sp. CNS606 12 Streptomyces Streptomyces albidoflavus 12 Streptomyces Streptomyces rimosus subsp. rimosus 11 Streptomyces Streptomyces pathocidini 11 Streptomyces Streptomyces clavuligerus ATCC 27064 11 Streptomyces Streptomyces megasporus 11 Streptomyces Streptomyces sp. NRRL F-5053 10 Streptomyces Streptomyces hygroscopicus subsp. limoneus 10 Streptomyces Streptomyces vitaminophilus DSM 41686 10 Streptomyces Streptomyces turgidiscabies Car8 9 Streptomyces Streptomyces zinciresistens K42 9 Streptomyces Streptomyces hirsutus 9 Streptomyces Streptomyces niveus 8 Streptomyces Streptomyces sp. TAA040 8 Streptomyces Streptomyces sp. Tue 6075 8 Streptomyces Streptomyces scabiei 87.22 8 Streptomyces Streptomyces niveus NCIMB 11891 7 Streptomyces Streptomyces griseus subsp. griseus NBRC 13350 7 Streptomyces Streptomyces albulus ZPM 7 Streptomyces Streptomyces lincolnensis 6 Streptomyces Streptomyces davawensis JCM 4913 6 Streptomyces Streptomyces yerevanensis 6 Streptomyces Streptomyces roseoverticillatus 6 Streptomyces Streptomyces sp. CFMR 7 6 Streptomyces Streptomyces catenulae 6 Streptomyces Streptomyces purpureus KA281 6 Streptomyces Streptomyces viridochromogenes DSM 40736 6 Streptomyces Streptomyces sp. 769 5 Streptomyces Streptomyces pristinaespiralis 5 Streptomyces Streptomyces violens 5 Streptomyces Streptomyces acidiscabies 84-104 5 Streptomyces Streptomyces griseofuscus 5 Streptomyces Streptomyces olivaceus 4 Streptomyces Streptomyces paucisporeus 4 Streptomyces Streptomyces albulus 4 Streptomyces Streptomyces pratensis ATCC 33331 4 Streptomyces Streptomyces humi 4 Streptomyces Streptomyces griseoaurantiacus M045 4 Streptomyces Streptomyces prasinopilosus 4 Streptomyces Streptomyces avermitilis MA-4680 = NBRC 14893 4 Streptomyces Streptomyces varsoviensis 3 Streptomyces Streptomyces alboflavus 3 Streptomyces Streptomyces virginiae 3 Streptomyces Streptomyces sp. SirexAA-E 3 Streptomyces Streptomyces sp. Tu6071 3 Streptomyces Streptomyces griseochromogenes 3 Streptomyces Streptomyces griseoruber 3 Streptomyces Streptomyces globisporus C-1027 2 Streptomyces Streptomyces noursei ATCC 11455 2 Streptomyces Streptomyces aurantiacus 2 Streptomyces Streptomyces ghanaensis ATCC 14672 2 Streptomyces Streptomyces fulvissimus DSM 40593 2 Streptomyces Streptomyces bikiniensis 2 Streptomyces Streptomyces sp. LaPpAH-95 2 Streptomyces Streptomyces sp. 150FB 2 Streptomyces Streptomyces sp. AS58 2 Streptomyces Streptomyces sp. NRRL WC-3605 2 Streptomyces Streptomyces venezuelae ATCC 10712 2 Streptomyces Streptomyces griseus subsp. griseus 2 Streptomyces Streptomyces subrutilus 2 Streptomyces Streptomyces sp. S10(2016) 2 Streptomyces Streptomyces atroolivaceus 2 Streptomyces Streptomyces resistomycificus 1 Streptomyces Streptomyces ossamyceticus 1 Streptomyces Streptomyces aureocirculatus 1 Streptomyces Streptomyces seoulensis 1 Streptomyces Streptomyces sp. RTd22 1 Streptomyces Streptomyces sp. CB02488 1 Streptomyces Streptomyces sp. PAMC 26508 1 Streptomyces Streptomyces himastatinicus ATCC 53653 1 Streptomyces Streptomyces kanamyceticus 1 Streptomyces Streptomyces hokutonensis # 2800 reads uniquely mapped to Succinispira (multi-hits among diff. species in Succinispira allowed) 2800 Succinispira Succinispira mobilis DSM 6222 # 5483 reads uniquely mapped to Sulfuricurvum (multi-hits among diff. species in Sulfuricurvum allowed) 5483 Sulfuricurvum Sulfuricurvum kujiense DSM 16994 # 739 reads uniquely mapped to Sulfurihydrogenibium (multi-hits among diff. species in Sulfurihydrogenibium allowed) 574 Sulfurihydrogenibium Sulfurihydrogenibium sp. YO3AOP1 131 Sulfurihydrogenibium Sulfurihydrogenibium azorense Az-Fu1 22 Sulfurihydrogenibium Sulfurihydrogenibium yellowstonense SS-5 12 Sulfurihydrogenibium Sulfurihydrogenibium subterraneum DSM 15120 # 53745 reads uniquely mapped to Sulfuritalea (multi-hits among diff. species in Sulfuritalea allowed) 53745 Sulfuritalea Sulfuritalea hydrogenivorans sk43H # 20303 reads uniquely mapped to Sulfurospirillum (multi-hits among diff. species in Sulfurospirillum allowed) 14403 Sulfurospirillum Sulfurospirillum cavolei 4655 Sulfurospirillum Sulfurospirillum arcachonense DSM 9755 496 Sulfurospirillum Sulfurospirillum halorespirans DSM 13726 294 Sulfurospirillum Sulfurospirillum multivorans DSM 12446 247 Sulfurospirillum Sulfurospirillum arsenophilum NBRC 109478 114 Sulfurospirillum Sulfurospirillum barnesii SES-3 70 Sulfurospirillum Sulfurospirillum deleyianum DSM 6946 24 Sulfurospirillum Sulfurospirillum sp. UCH001 # 24964 reads uniquely mapped to Synechococcus (multi-hits among diff. species in Synechococcus allowed) 9700 Synechococcus Synechococcus sp. JA-2-3B'a(2-13) 8738 Synechococcus Synechococcus sp. JA-3-3Ab 3682 Synechococcus Synechococcus sp. PCC 7502 499 Synechococcus Synechococcus sp. PCC 7336 379 Synechococcus Synechococcus sp. PCC 7117 377 Synechococcus Synechococcus sp. PCC 73109 374 Synechococcus Synechococcus sp. PCC 8807 232 Synechococcus Synechococcus sp. PCC 7335 218 Synechococcus Synechococcus sp. PCC 6312 144 Synechococcus Synechococcus sp. PCC 7003 129 Synechococcus Synechococcus sp. PCC 7002 65 Synechococcus Synechococcus sp. NKBG15041c 50 Synechococcus Synechococcus elongatus PCC 7942 48 Synechococcus Synechococcus elongatus PCC 6301 44 Synechococcus Synechococcus sp. UTEX 2973 26 Synechococcus Synechococcus sp. WH 8102 24 Synechococcus Synechococcus sp. WH 5701 23 Synechococcus Synechococcus sp. WH 8103 22 Synechococcus Synechococcus sp. GFB01 19 Synechococcus Synechococcus sp. CC9902 19 Synechococcus Synechococcus sp. KORDI-52 18 Synechococcus Synechococcus sp. SynAce01 17 Synechococcus Synechococcus sp. CC9311 17 Synechococcus Synechococcus sp. WH 8109 14 Synechococcus Synechococcus sp. CC9605 14 Synechococcus Candidatus Synechococcus spongiarum SH4 13 Synechococcus Synechococcus sp. KORDI-100 12 Synechococcus Synechococcus sp. KORDI-49 12 Synechococcus Synechococcus sp. WH 7803 11 Synechococcus Synechococcus sp. RS9916 8 Synechococcus Synechococcus sp. RS9917 8 Synechococcus Synechococcus sp. RCC307 8 Synechococcus Synechococcus sp. CB0205 # 5527 reads uniquely mapped to Synechocystis (multi-hits among diff. species in Synechocystis allowed) 2480 Synechocystis Synechocystis sp. PCC 6803 731 Synechocystis Synechocystis sp. PCC 7509 658 Synechocystis Synechocystis sp. PCC 6803 substr. PCC-P 626 Synechocystis Synechocystis sp. PCC 6803 substr. PCC-N 616 Synechocystis Synechocystis sp. PCC 6803 substr. GT-I 416 Synechocystis Synechocystis sp. PCC 6714 # 3893 reads uniquely mapped to Syntrophomonas (multi-hits among diff. species in Syntrophomonas allowed) 1759 Syntrophomonas Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 1360 Syntrophomonas Syntrophomonas zehnderi OL-4 774 Syntrophomonas Syntrophomonas palmitatica JCM 14374 # 2132 reads uniquely mapped to Tenacibaculum (multi-hits among diff. species in Tenacibaculum allowed) 941 Tenacibaculum Tenacibaculum sp. LPB0136 522 Tenacibaculum Tenacibaculum dicentrarchi 421 Tenacibaculum Tenacibaculum mesophilum 147 Tenacibaculum Tenacibaculum ovolyticum DSM 18103 101 Tenacibaculum Tenacibaculum maritimum NBRC 15946 # 51536 reads uniquely mapped to Tepidimonas (multi-hits among diff. species in Tepidimonas allowed) 51536 Tepidimonas Tepidimonas taiwanensis # 12917 reads uniquely mapped to Tepidiphilus (multi-hits among diff. species in Tepidiphilus allowed) 6724 Tepidiphilus Tepidiphilus margaritifer DSM 15129 6193 Tepidiphilus Tepidiphilus thermophilus # 87983 reads uniquely mapped to Teredinibacter (multi-hits among diff. species in Teredinibacter allowed) 50113 Teredinibacter Teredinibacter sp. 1162T.S.0a.05 37870 Teredinibacter Teredinibacter turnerae T7901 # 14320 reads uniquely mapped to Thalassobacter (multi-hits among diff. species in Thalassobacter allowed) 14320 Thalassobacter Thalassobacter stenotrophicus # 76785 reads uniquely mapped to Thalassotalea (multi-hits among diff. species in Thalassotalea allowed) 70430 Thalassotalea Thalassotalea crassostreae 6355 Thalassotalea Thalassotalea sp. ND16A # 8939 reads uniquely mapped to Thermoanaerobacterium (multi-hits among diff. species in Thermoanaerobacterium allowed) 3157 Thermoanaerobacterium Thermoanaerobacterium xylanolyticum LX-11 2893 Thermoanaerobacterium Thermoanaerobacterium thermosaccharolyticum M0795 2889 Thermoanaerobacterium Thermoanaerobacterium thermosaccharolyticum DSM 571 # 3550 reads uniquely mapped to Thermobispora (multi-hits among diff. species in Thermobispora allowed) 3550 Thermobispora Thermobispora bispora DSM 43833 # 7596 reads uniquely mapped to Thermobrachium (multi-hits among diff. species in Thermobrachium allowed) 7596 Thermobrachium Thermobrachium celere DSM 8682 # 4442 reads uniquely mapped to Thermodesulfovibrio (multi-hits among diff. species in Thermodesulfovibrio allowed) 2495 Thermodesulfovibrio Thermodesulfovibrio yellowstonii DSM 11347 1947 Thermodesulfovibrio Thermodesulfovibrio thiophilus DSM 17215 # 9277 reads uniquely mapped to Thermosediminibacter (multi-hits among diff. species in Thermosediminibacter allowed) 9277 Thermosediminibacter Thermosediminibacter oceani DSM 16646 # 5360 reads uniquely mapped to Thermosynechococcus (multi-hits among diff. species in Thermosynechococcus allowed) 5360 Thermosynechococcus Thermosynechococcus elongatus BP-1 # 1071 reads uniquely mapped to Thermovibrio (multi-hits among diff. species in Thermovibrio allowed) 1071 Thermovibrio Thermovibrio ammonificans HB-1 # 18219 reads uniquely mapped to Thermus (multi-hits among diff. species in Thermus allowed) 6709 Thermus Thermus aquaticus Y51MC23 2059 Thermus Thermus caliditerrae 1705 Thermus Thermus igniterrae ATCC 700962 1673 Thermus Thermus scotoductus SA-01 1657 Thermus Thermus filiformis 1649 Thermus Thermus sp. CCB_US3_UF1 496 Thermus Thermus islandicus DSM 21543 428 Thermus Thermus brockianus 408 Thermus Thermus amyloliquefaciens 291 Thermus Thermus antranikianii DSM 12462 244 Thermus Thermus thermophilus SG0.5JP17-16 201 Thermus Thermus thermophilus HB27 196 Thermus Thermus thermophilus HB8 179 Thermus Thermus thermophilus JL-18 176 Thermus Thermus parvatiensis 148 Thermus Thermus oshimai JL-2 # 16382 reads uniquely mapped to Thioclava (multi-hits among diff. species in Thioclava allowed) 6643 Thioclava Thioclava dalianensis 5916 Thioclava Thioclava nitratireducens 2555 Thioclava Thioclava indica 1064 Thioclava Thioclava atlantica 204 Thioclava Thioclava pacifica DSM 10166 # 66409 reads uniquely mapped to Thioflavicoccus (multi-hits among diff. species in Thioflavicoccus allowed) 66409 Thioflavicoccus Thioflavicoccus mobilis 8321 # 68492 reads uniquely mapped to Thiohalocapsa (multi-hits among diff. species in Thiohalocapsa allowed) 68492 Thiohalocapsa Thiohalocapsa sp. ML1 # 93830 reads uniquely mapped to Thiomicrospira (multi-hits among diff. species in Thiomicrospira allowed) 23155 Thiomicrospira Thiomicrospira kuenenii DSM 12350 22105 Thiomicrospira Thiomicrospira sp. Milos-T1 11342 Thiomicrospira Thiomicrospira sp. MA2-6 9258 Thiomicrospira Thiomicrospira pelophila DSM 1534 7093 Thiomicrospira Thiomicrospira arctica DSM 13458 6185 Thiomicrospira Thiomicrospira sp. Milos-T2 5420 Thiomicrospira Thiomicrospira halophila DSM 15072 3511 Thiomicrospira Thiomicrospira chilensis DSM 12352 3374 Thiomicrospira Thiomicrospira sp. Kp2 2387 Thiomicrospira Thiomicrospira crunogena XCL-2 # 35659 reads uniquely mapped to Thiomonas (multi-hits among diff. species in Thiomonas allowed) 15803 Thiomonas Thiomonas sp. FB-6 7736 Thiomonas Thiomonas sp. FB-Cd 5046 Thiomonas Thiomonas intermedia K12 2654 Thiomonas Thiomonas bhubaneswarensis 2451 Thiomonas Thiomonas arsenitoxydans 1969 Thiomonas Thiomonas intermedia # 108403 reads uniquely mapped to Thiothrix (multi-hits among diff. species in Thiothrix allowed) 53747 Thiothrix Thiothrix disciformis DSM 14473 28674 Thiothrix Thiothrix lacustris DSM 21227 14174 Thiothrix Thiothrix nivea DSM 5205 11808 Thiothrix Thiothrix flexilis DSM 14609 # 28332 reads uniquely mapped to Tistrella (multi-hits among diff. species in Tistrella allowed) 28332 Tistrella Tistrella mobilis KA081020-065 # 63966 reads uniquely mapped to Tolypothrix (multi-hits among diff. species in Tolypothrix allowed) 63157 Tolypothrix Tolypothrix campylonemoides VB511288 485 Tolypothrix Tolypothrix sp. PCC 7601 307 Tolypothrix [Scytonema hofmanni] UTEX 2349 17 Tolypothrix Tolypothrix bouteillei VB521301 # 161603 reads uniquely mapped to Trabulsiella (multi-hits among diff. species in Trabulsiella allowed) 161603 Trabulsiella Trabulsiella odontotermitis # 24951 reads uniquely mapped to Treponema (multi-hits among diff. species in Treponema allowed) 14840 Treponema Treponema brennaborense DSM 12168 2920 Treponema Treponema primitia ZAS-1 1875 Treponema Treponema succinifaciens DSM 2489 1668 Treponema Treponema azotonutricium ZAS-9 1658 Treponema Treponema primitia ZAS-2 404 Treponema Treponema phagedenis 4A 297 Treponema Treponema putidum 265 Treponema Treponema maltophilum ATCC 51939 218 Treponema Treponema caldarium DSM 7334 200 Treponema Treponema pedis str. T A4 141 Treponema Treponema saccharophilum DSM 2985 88 Treponema Treponema socranskii subsp. paredis ATCC 35535 86 Treponema Treponema sp. C6A8 73 Treponema Treponema denticola ATCC 35405 47 Treponema Treponema vincentii F0403 36 Treponema Treponema sp. OMZ 838 31 Treponema NC_000919 29 Treponema Treponema paraluiscuniculi Cuniculi A 29 Treponema Treponema pallidum subsp. pallidum str. Sea 81-4 27 Treponema Treponema lecithinolyticum ATCC 700332 19 Treponema Treponema medium ATCC 700293 # 5661 reads uniquely mapped to Trichodesmium (multi-hits among diff. species in Trichodesmium allowed) 5661 Trichodesmium Trichodesmium erythraeum IMS101 # 1811 reads uniquely mapped to Trichormus (multi-hits among diff. species in Trichormus allowed) 1811 Trichormus 'Nostoc azollae' 0708 # 4257 reads uniquely mapped to Truepera (multi-hits among diff. species in Truepera allowed) 4257 Truepera Truepera radiovictrix DSM 17093 # 48672 reads uniquely mapped to Variovorax (multi-hits among diff. species in Variovorax allowed) 20694 Variovorax Variovorax sp. PAMC 28711 18126 Variovorax Variovorax paradoxus EPS 9693 Variovorax Variovorax sp. URHB0020 86 Variovorax Variovorax paradoxus S110 73 Variovorax Variovorax paradoxus B4 # 44721 reads uniquely mapped to Verminephrobacter (multi-hits among diff. species in Verminephrobacter allowed) 36623 Verminephrobacter Verminephrobacter eiseniae EF01-2 8098 Verminephrobacter Verminephrobacter aporrectodeae subsp. tuberculatae At4 # 10212 reads uniquely mapped to Verrucomicrobium (multi-hits among diff. species in Verrucomicrobium allowed) 5651 Verrucomicrobium Verrucomicrobium sp. 3C 4561 Verrucomicrobium Verrucomicrobium spinosum DSM 4136 = JCM 18804 # 151612 reads uniquely mapped to Vibrio (multi-hits among diff. species in Vibrio allowed) 22547 Vibrio Vibrio cholerae 14975 Vibrio Vibrio metschnikovii CIP 69.14 9473 Vibrio Vibrio vulnificus 8890 Vibrio Vibrio parahaemolyticus 8129 Vibrio Vibrio scophthalmi 6615 Vibrio Vibrio alginolyticus 6446 Vibrio Vibrio fluvialis 5279 Vibrio Vibrio mimicus 4208 Vibrio Vibrio tasmaniensis LGP32 3815 Vibrio Vibrio tritonius 3594 Vibrio Vibrio coralliilyticus 3447 Vibrio Vibrio orientalis CIP 102891 = ATCC 33934 2842 Vibrio Vibrio parahaemolyticus BB22OP 2780 Vibrio Vibrio anguillarum 2756 Vibrio Vibrio harveyi 2532 Vibrio Vibrio cholerae O395 2355 Vibrio Vibrio campbellii ATCC BAA-1116 2334 Vibrio Vibrio natriegens 1802 Vibrio Vibrio furnissii NCTC 11218 1777 Vibrio Vibrio parahaemolyticus O1:K33 str. CDC_K4557 1692 Vibrio Vibrio cholerae 2740-80 1643 Vibrio Vibrio vulnificus YJ016 1616 Vibrio Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 1614 Vibrio Vibrio vulnificus MO6-24/O 1613 Vibrio Vibrio vulnificus CMCP6 1450 Vibrio Vibrio breoganii 1371 Vibrio Vibrio alginolyticus NBRC 15630 = ATCC 17749 1345 Vibrio Vibrio tubiashii ATCC 19109 1256 Vibrio Vibrio cholerae O1 str. KW3 1240 Vibrio Vibrio cholerae O1 biovar El Tor 1214 Vibrio Vibrio cholerae LMA3984-4 1195 Vibrio Vibrio cholerae O1 biovar El Tor str. N16961 1144 Vibrio Vibrio cholerae IEC224 1125 Vibrio Vibrio cholerae MJ-1236 1123 Vibrio Vibrio cholerae MS6 1103 Vibrio Vibrio owensii 1088 Vibrio Vibrio diazotrophicus NBRC 103148 1056 Vibrio Vibrio anguillarum 775 1050 Vibrio Vibrio anguillarum M3 1043 Vibrio Vibrio cholerae O1 str. 2010EL-1786 1021 Vibrio Vibrio cholerae M66-2 950 Vibrio Vibrio maritimus 889 Vibrio Vibrio campbellii 831 Vibrio Vibrio antiquarius 803 Vibrio Vibrio parahaemolyticus O1:Kuk str. FDA_R31 791 Vibrio Vibrio nigripulchritudo 753 Vibrio Vibrio sp. EJY3 674 Vibrio Vibrio parahaemolyticus RIMD 2210633 577 Vibrio Vibrio parahaemolyticus UCM-V493 464 Vibrio Vibrio proteolyticus NBRC 13287 349 Vibrio Vibrio mexicanus 304 Vibrio Vibrio genomosp. F10 str. ZF-129 302 Vibrio Vibrio mediterranei NBRC 15635 174 Vibrio Vibrio crassostreae 81 Vibrio Vibrio bivalvicida 67 Vibrio Vibrio genomosp. F6 str. FF-238 4 Vibrio Vibrio litoralis DSM 17657 1 Vibrio Vibrio rhizosphaerae DSM 18581 # 10913 reads uniquely mapped to Vulgatibacter (multi-hits among diff. species in Vulgatibacter allowed) 10913 Vulgatibacter Vulgatibacter incomptus # 14296 reads uniquely mapped to Weeksella (multi-hits among diff. species in Weeksella allowed) 14296 Weeksella Weeksella virosa DSM 16922 # 17610 reads uniquely mapped to Weissella (multi-hits among diff. species in Weissella allowed) 7817 Weissella Weissella cibaria 2377 Weissella Weissella ceti 2367 Weissella Weissella koreensis KACC 15510 2324 Weissella Weissella oryzae SG25 1664 Weissella Weissella jogaejeotgali 380 Weissella Weissella kandleri 377 Weissella Weissella viridescens 171 Weissella Weissella paramesenteroides ATCC 33313 133 Weissella Weissella minor # 64749 reads uniquely mapped to Wenzhouxiangella (multi-hits among diff. species in Wenzhouxiangella allowed) 64749 Wenzhouxiangella Wenzhouxiangella marina # 71383 reads uniquely mapped to Wigglesworthia (multi-hits among diff. species in Wigglesworthia allowed) 47657 Wigglesworthia Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 23726 Wigglesworthia Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis # 8857 reads uniquely mapped to Wolbachia (multi-hits among diff. species in Wolbachia allowed) 3397 Wolbachia Wolbachia endosymbiont of Cimex lectularius 1154 Wolbachia Wolbachia endosymbiont of Onchocerca volvulus str. Cameroon 1145 Wolbachia Wolbachia endosymbiont of Onchocerca ochengi 972 Wolbachia Wolbachia endosymbiont strain TRS of Brugia malayi 393 Wolbachia Wolbachia endosymbiont of Diaphorina citri 380 Wolbachia Wolbachia endosymbiont of Drosophila simulans wNo 366 Wolbachia Wolbachia endosymbiont of Culex quinquefasciatus Pel 279 Wolbachia Wolbachia sp. wRi 279 Wolbachia Wolbachia endosymbiont of Drosophila melanogaster 248 Wolbachia Wolbachia endosymbiont of Glossina morsitans morsitans 244 Wolbachia Wolbachia endosymbiont of Drosophila simulans wHa # 903 reads uniquely mapped to Xanthomarina (multi-hits among diff. species in Xanthomarina allowed) 903 Xanthomarina Xanthomarina gelatinilytica # 3245 reads uniquely mapped to Xenococcus (multi-hits among diff. species in Xenococcus allowed) 3245 Xenococcus Xenococcus sp. PCC 7305 # 205131 reads uniquely mapped to Xenorhabdus (multi-hits among diff. species in Xenorhabdus allowed) 50502 Xenorhabdus Xenorhabdus poinarii G6 44382 Xenorhabdus Xenorhabdus doucetiae 38107 Xenorhabdus Xenorhabdus hominickii 20594 Xenorhabdus Xenorhabdus bovienii SS-2004 19754 Xenorhabdus Xenorhabdus bovienii 15911 Xenorhabdus Xenorhabdus nematophila AN6/1 15881 Xenorhabdus Xenorhabdus nematophila ATCC 19061 # 198097 reads uniquely mapped to Yersinia (multi-hits among diff. species in Yersinia allowed) 27413 Yersinia Yersinia enterocolitica 15227 Yersinia Yersinia pestis 13630 Yersinia Yersinia pseudotuberculosis 11592 Yersinia Yersinia aldovae 670-83 11024 Yersinia Yersinia enterocolitica subsp. palearctica 105.5R(r) 5564 Yersinia Yersinia pseudotuberculosis PB1/+ 5493 Yersinia Yersinia pseudotuberculosis IP 32953 5228 Yersinia Yersinia ruckeri 5190 Yersinia Yersinia pestis Antiqua 4902 Yersinia Yersinia pseudotuberculosis YPIII 4871 Yersinia Yersinia pestis Pestoides F 4830 Yersinia Yersinia pestis Angola 4255 Yersinia Yersinia intermedia 4209 Yersinia Yersinia pestis A1122 4134 Yersinia Yersinia pestis CO92 3922 Yersinia Yersinia sp. FDAARGOS_228 3298 Yersinia Yersinia frederiksenii Y225 3009 Yersinia Yersinia aldovae 2946 Yersinia Yersinia similis 2857 Yersinia Yersinia rohdei 2793 Yersinia Yersinia pestis 3770 2714 Yersinia Yersinia pseudotuberculosis str. PA3606 2582 Yersinia Yersinia enterocolitica subsp. palearctica Y11 2534 Yersinia Yersinia pestis 1522 2504 Yersinia Yersinia pestis 1412 2504 Yersinia Yersinia pestis 1413 2475 Yersinia Yersinia pseudotuberculosis IP 31758 2466 Yersinia Yersinia pestis Pestoides G 2465 Yersinia Yersinia pestis 3067 2451 Yersinia Yersinia enterocolitica (type O:5) str. YE53/03 2442 Yersinia Yersinia enterocolitica subsp. enterocolitica 8081 2355 Yersinia Yersinia pestis biovar Microtus str. 91001 2332 Yersinia Yersinia pestis biovar Medievalis str. Harbin 35 2324 Yersinia Yersinia pestis KIM10+ 2318 Yersinia Yersinia pestis 8787 2283 Yersinia Yersinia kristensenii 2233 Yersinia Yersinia aleksiciae 2231 Yersinia Yersinia pestis Nepal516 2214 Yersinia Yersinia pestis str. Pestoides B 2127 Yersinia Yersinia pestis 2944 2089 Yersinia Yersinia pestis D182038 2056 Yersinia Yersinia pestis D106004 2011 Yersinia Yersinia pestis Z176003 # 218152 reads uniquely mapped to Yokenella (multi-hits among diff. species in Yokenella allowed) 218152 Yokenella Yokenella regensburgei ATCC 49455 # 125 reads uniquely mapped to Zavarzinella (multi-hits among diff. species in Zavarzinella allowed) 125 Zavarzinella Zavarzinella formosa DSM 19928 # 12569 reads uniquely mapped to Zymomonas (multi-hits among diff. species in Zymomonas allowed) 11501 Zymomonas Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 542 Zymomonas Zymomonas mobilis subsp. pomaceae ATCC 29192 270 Zymomonas Zymomonas mobilis subsp. mobilis ATCC 29191 175 Zymomonas Zymomonas mobilis subsp. mobilis NCIMB 11163 39 Zymomonas Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 30 Zymomonas Zymomonas mobilis subsp. mobilis NRRL B-12526 12 Zymomonas Zymomonas mobilis subsp. mobilis ATCC 10988