# 2018/02/10 01:34:44
# HUMAN	Target (Host) organism
# DNA	Sequencing source
# H1703_3	Replication ID
# H1703	Sample ID
# DRR016865_1	Read1
# DRR016865_2	Read2
R1	 199143378 (100.0000%)	[A] Total raw reads
R1	 187014123 (93.9093%)	[B] Total reads after QC of (A)
R1		
R1	 187014123 (100.0000%)	[B-2] Total reads of (B) passed to HISAT2
R1	 319753049 (85.4890%)	[B-3] Total mapped reads of (B-2)x2
R1	  54275197 (14.5110%)	[B-4] Total unmapped reads of (B-2)x2
R1	 162396040 (86.8362%)	[F] Total mapped reads of (B-2)
R1	  24618083 (13.1638%)	[G] Total unmapped reads of (B-2)
R1	   9441454 (5.0485%)	[H] Total unmapped reads of (B-2) after running BLASTn with (G)
R1	 177572669 (94.9515%)	[J] Total mapped reads to host genome ( (B-2)-H)
R1	      5499 (0.0029%)	[I-1] Total mapped reads of (H) to exo. genomes
R1	        30.968	[I-3] RPMH of (I-1)
R1	        29.404	[I-4] PPM of (I-1)
R1	       122 (0.0001%)	[I-5] Total chimeric reads of (I-1)
R1	         0.687	[I-7] RPMH of (I-5)
R1	         0.652	[I-8] PPM of (I-5)
R1		
## -----------------------------------------

R2	 199143378 (100.0000%)	[A] Total raw reads
R2	 187014123 (93.9093%)	[B] Total reads after QC of (A)
R2		
R2	 187014123 (100.0000%)	[B-2] Total reads of (B) passed to HISAT2
R2	 319753049 (85.4890%)	[B-3] Total mapped reads of (B-2)x2
R2	  54275197 (14.5110%)	[B-4] Total unmapped reads of (B-2)x2
R2	 157357009 (84.1418%)	[F] Total mapped reads of (B-2)
R2	  29657114 (15.8582%)	[G] Total unmapped reads of (B-2)
R2	   7052099 (3.7709%)	[H] Total unmapped reads of (B-2) after running BLASTn with (G)
R2	 179962024 (96.2291%)	[J] Total mapped reads to host genome ( (B-2)-H)
R2	      3966 (0.0021%)	[I-1] Total mapped reads of (H) to exo. genomes
R2	        22.038	[I-3] RPMH of (I-1)
R2	        21.207	[I-4] PPM of (I-1)
R2	        53 (0.0000%)	[I-5] Total chimeric reads of (I-1)
R2	         0.294	[I-7] RPMH of (I-5)
R2	         0.283	[I-8] PPM of (I-5)
R2		
## -----------------------------------------

##=============================================##
# List threshold of RPMH   > 1
# List threshold of P-value < 0.001
# RPMH	PPM	Total	Multi_Reads(All_ExoGenus)	Uniq_Reads(This_Genus)	wTotal	Sum_ReadLength	Type	Exo	Genus	Pvalue(Uniq)
5.3021	5.0344	960	30	930	941.501	81030	ALL_R1	bacteria	Mesorhizobium	0.0
3.8576	3.6629	695	13	682	685.005	69847	ALL_R1	bacteria	Cutibacterium	0.0
2.9657	2.8160	1135	813	322	526.627	113732	ALL_R1	bacteria	Campylobacter	0.0
2.2073	2.0959	571	389	182	391.955	52911	ALL_R1	bacteria	Alcanivorax	0.0
1.5677	1.4885	327	73	254	278.374	32621	ALL_R1	bacteria	Burkholderia	0.0
1.3704	1.3012	850	823	27	243.350	83605	ALL_R1	bacteria	Eubacterium	3.10e-38
1.2277	1.1658	242	29	213	218.013	24103	ALL_R1	bacteria	Pseudomonas	0.0
1.1745	1.1152	352	311	41	208.560	33602	ALL_R1	bacteria	Tetrasphaera	3.34e-125
<<
3.6070	3.4710	667	27	640	649.125	66908	ALL_R2	bacteria	Cutibacterium	0.0
3.1938	3.0733	1097	784	313	574.758	110043	ALL_R2	bacteria	Campylobacter	0.0
1.7107	1.6462	341	41	300	307.864	34044	ALL_R2	bacteria	Burkholderia	0.0
1.4282	1.3743	751	735	16	257.017	75158	ALL_R2	bacteria	Eubacterium	6.52e-26
1.2712	1.2233	329	225	104	228.767	31643	ALL_R2	bacteria	Alcanivorax	0.0
1.2156	1.1698	240	24	216	218.770	23943	ALL_R2	bacteria	Pseudomonas	0.0