#Unique_Reads Genus Species # 31 reads uniquely mapped to Achromobacter (multi-hits among diff. species in Achromobacter allowed) 8 Achromobacter Achromobacter xylosoxidans 6 Achromobacter Achromobacter sp. DMS1 5 Achromobacter Achromobacter denitrificans 5 Achromobacter Achromobacter insolitus 3 Achromobacter Achromobacter denitrificans NBRC 15125 2 Achromobacter Achromobacter xylosoxidans C54 2 Achromobacter Achromobacter xylosoxidans A8 # 46 reads uniquely mapped to Acidovorax (multi-hits among diff. species in Acidovorax allowed) 11 Acidovorax Acidovorax sp. KKS102 9 Acidovorax Acidovorax sp. RAC01 7 Acidovorax Acidovorax sp. JS42 7 Acidovorax Acidovorax caeni 3 Acidovorax Acidovorax ebreus TPSY 3 Acidovorax Acidovorax radicis N35 2 Acidovorax Acidovorax citrulli AAC00-1 2 Acidovorax Acidovorax sp. Root217 1 Acidovorax Acidovorax sp. Leaf160 1 Acidovorax Acidovorax avenae subsp. avenae ATCC 19860 # 4332 reads uniquely mapped to Acinetobacter (multi-hits among diff. species in Acinetobacter allowed) 4296 Acinetobacter Acinetobacter rudis 5 Acinetobacter Acinetobacter baumannii 4 Acinetobacter Acinetobacter johnsonii XBB1 2 Acinetobacter Acinetobacter sp. TGL-Y2 2 Acinetobacter Acinetobacter baumannii AB307-0294 2 Acinetobacter Acinetobacter indicus CIP 110367 2 Acinetobacter Acinetobacter equi 2 Acinetobacter Acinetobacter bohemicus ANC 3994 1 Acinetobacter Acinetobacter baumannii BJAB0715 1 Acinetobacter Acinetobacter junii 1 Acinetobacter NC_011586 1 Acinetobacter Acinetobacter baumannii BJAB0868 1 Acinetobacter Acinetobacter calcoaceticus 1 Acinetobacter Acinetobacter ursingii DSM 16037 = CIP 107286 1 Acinetobacter Acinetobacter sp. TTH0-4 1 Acinetobacter Acinetobacter gyllenbergii NIPH 230 1 Acinetobacter Acinetobacter harbinensis 1 Acinetobacter Acinetobacter larvae 1 Acinetobacter Acinetobacter sp. NCu2D-2 1 Acinetobacter NZ_CP015483 1 Acinetobacter Acinetobacter nectaris CIP 110549 1 Acinetobacter Acinetobacter oleivorans DR1 1 Acinetobacter Acinetobacter lwoffii NCTC 5866 = CIP 64.10 = NIPH 512 1 Acinetobacter Acinetobacter baumannii 1656-2 1 Acinetobacter Acinetobacter brisouii CIP 110357 # 21 reads uniquely mapped to Actinobaculum (multi-hits among diff. species in Actinobaculum allowed) 17 Actinobaculum Actinobaculum sp. oral taxon 183 str. F0552 3 Actinobaculum Actinobaculum massiliense ACS-171-V-Col2 1 Actinobaculum Actinobaculum suis # 1026 reads uniquely mapped to Actinomyces (multi-hits among diff. species in Actinomyces allowed) 879 Actinomyces Actinomyces odontolyticus ATCC 17982 34 Actinomyces Actinomyces oris 32 Actinomyces Actinomyces meyeri 25 Actinomyces Actinomyces johnsonii F0542 12 Actinomyces Actinomyces graevenitzii C83 10 Actinomyces Actinomyces hongkongensis 8 Actinomyces Actinomyces sp. Marseille-P2985 5 Actinomyces Actinomyces sp. oral taxon 448 str. F0400 5 Actinomyces Actinomyces turicensis ACS-279-V-Col4 3 Actinomyces Actinomyces massiliensis 4401292 3 Actinomyces Actinomyces timonensis DSM 23838 2 Actinomyces Actinomyces vaccimaxillae DSM 15804 2 Actinomyces Actinomyces sp. oral taxon 848 str. F0332 1 Actinomyces Actinomyces israelii DSM 43320 1 Actinomyces Actinomyces slackii ATCC 49928 1 Actinomyces Actinomyces sp. VUL4_3 1 Actinomyces Actinomyces sp. oral taxon 414 1 Actinomyces Actinomyces europaeus ACS-120-V-Col10b 1 Actinomyces Actinomyces urogenitalis DSM 15434 # 73 reads uniquely mapped to Aeromonas (multi-hits among diff. species in Aeromonas allowed) 18 Aeromonas Aeromonas media WS 15 Aeromonas Aeromonas hydrophila 6 Aeromonas Aeromonas hydrophila YL17 5 Aeromonas Aeromonas hydrophila 4AK4 5 Aeromonas Aeromonas aquatica 4 Aeromonas Aeromonas hydrophila ML09-119 4 Aeromonas Aeromonas eucrenophila 3 Aeromonas Aeromonas veronii B565 3 Aeromonas Aeromonas veronii 2 Aeromonas Aeromonas schubertii 2 Aeromonas Aeromonas hydrophila subsp. hydrophila ATCC 7966 2 Aeromonas Aeromonas simiae 1 Aeromonas Aeromonas hydrophila J-1 1 Aeromonas Aeromonas enteropelogenes 1 Aeromonas Aeromonas hydrophila NJ-35 1 Aeromonas Aeromonas salmonicida subsp. salmonicida A449 # 22 reads uniquely mapped to Alicyclobacillus (multi-hits among diff. species in Alicyclobacillus allowed) 10 Alicyclobacillus Alicyclobacillus macrosporangiidus CPP55 5 Alicyclobacillus Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 4 Alicyclobacillus Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 1 Alicyclobacillus Alicyclobacillus ferrooxydans 1 Alicyclobacillus Alicyclobacillus hesperidum URH17-3-68 1 Alicyclobacillus Alicyclobacillus acidoterrestris ATCC 49025 # 25 reads uniquely mapped to Alishewanella (multi-hits among diff. species in Alishewanella allowed) 25 Alishewanella Alishewanella agri BL06 # 27 reads uniquely mapped to Alteromonas (multi-hits among diff. species in Alteromonas allowed) 6 Alteromonas Alteromonas mediterranea 5 Alteromonas Alteromonas australica 2 Alteromonas Alteromonas mediterranea U8 2 Alteromonas Alteromonas mediterranea U7 2 Alteromonas Alteromonas mediterranea UM4b 2 Alteromonas Alteromonas sp. RW2A1 2 Alteromonas Alteromonas addita 1 Alteromonas Alteromonas mediterranea UM7 1 Alteromonas Alteromonas macleodii 1 Alteromonas Alteromonas mediterranea DE1 1 Alteromonas Alteromonas mediterranea DE 1 Alteromonas Alteromonas macleodii ATCC 27126 1 Alteromonas Alteromonas stellipolaris # 28 reads uniquely mapped to Aquabacterium (multi-hits among diff. species in Aquabacterium allowed) 14 Aquabacterium Aquabacterium parvum 14 Aquabacterium Aquabacterium sp. NJ1 # 32 reads uniquely mapped to Aquincola (multi-hits among diff. species in Aquincola allowed) 32 Aquincola Aquincola tertiaricarbonis # 23 reads uniquely mapped to Arthrobacter (multi-hits among diff. species in Arthrobacter allowed) 3 Arthrobacter Arthrobacter sp. IHBB 11108 3 Arthrobacter Arthrobacter sp. H14 3 Arthrobacter Arthrobacter sp. H20 3 Arthrobacter Arthrobacter sp. ZXY-2 2 Arthrobacter Arthrobacter sp. YC-RL1 2 Arthrobacter Arthrobacter alpinus 1 Arthrobacter Arthrobacter sp. Leaf141 1 Arthrobacter Arthrobacter sp. ERGS1:01 1 Arthrobacter Arthrobacter sp. L77 1 Arthrobacter Arthrobacter sp. Soil782 1 Arthrobacter Arthrobacter sp. U41 1 Arthrobacter Arthrobacter sp. Edens01 1 Arthrobacter Arthrobacter sp. Rue61a # 16 reads uniquely mapped to Atopobium (multi-hits among diff. species in Atopobium allowed) 5 Atopobium Atopobium minutum 4 Atopobium Atopobium parvulum DSM 20469 3 Atopobium Atopobium vaginae DSM 15829 3 Atopobium Atopobium vaginae PB189-T1-4 1 Atopobium Atopobium sp. oral taxon 199 str. F0494 # 15 reads uniquely mapped to Aureimonas (multi-hits among diff. species in Aureimonas allowed) 5 Aureimonas Aureimonas sp. Leaf454 4 Aureimonas Aureimonas sp. Leaf324 3 Aureimonas Aureimonas altamirensis 3 Aureimonas Aureimonas ureilytica # 37 reads uniquely mapped to Bacillus (multi-hits among diff. species in Bacillus allowed) 5 Bacillus Bacillus coagulans 2-6 5 Bacillus Bacillus bataviensis LMG 21833 3 Bacillus Bacillus coahuilensis m4-4 2 Bacillus Bacillus coagulans DSM 1 = ATCC 7050 2 Bacillus Bacillus sp. FJAT-25496 2 Bacillus Bacillus sp. FJAT-18017 2 Bacillus Bacillus anthracis 1 Bacillus Bacillus cytotoxicus NVH 391-98 1 Bacillus Bacillus sp. FJAT-22090 1 Bacillus Bacillus subtilis subsp. subtilis str. BSP1 1 Bacillus Bacillus cereus 1 Bacillus Bacillus thuringiensis serovar kurstaki str. YBT-1520 1 Bacillus Bacillus akibai JCM 9157 1 Bacillus Bacillus amyloliquefaciens LFB112 1 Bacillus Bacillus coagulans 1 Bacillus Bacillus subtilis subsp. subtilis 6051-HGW 1 Bacillus Bacillus amyloliquefaciens 1 Bacillus Bacillus ligniniphilus 1 Bacillus Bacillus velezensis 1 Bacillus Bacillus licheniformis 1 Bacillus Bacillus thermoamylovorans 1 Bacillus Bacillus humi 1 Bacillus Bacillus pseudofirmus OF4 # 6 reads uniquely mapped to Bacteroides (multi-hits among diff. species in Bacteroides allowed) 2 Bacteroides Bacteroides faecichinchillae JCM 17102 2 Bacteroides Bacteroides oleiciplenus YIT 12058 2 Bacteroides Bacteroides dorei CL03T12C01 # 13 reads uniquely mapped to Blastomonas (multi-hits among diff. species in Blastomonas allowed) 7 Blastomonas Blastomonas sp. RAC04 6 Blastomonas Blastomonas sp. AAP53 # 33 reads uniquely mapped to Bordetella (multi-hits among diff. species in Bordetella allowed) 20 Bordetella Bordetella pertussis 4 Bordetella Bordetella sp. N 2 Bordetella Bordetella flabilis 2 Bordetella Bordetella sp. FB-8 1 Bordetella Bordetella parapertussis 12822 1 Bordetella Bordetella holmesii F627 1 Bordetella Bordetella holmesii H558 1 Bordetella Bordetella holmesii ATCC 51541 1 Bordetella Bordetella trematum # 4304 reads uniquely mapped to Brachybacterium (multi-hits among diff. species in Brachybacterium allowed) 4287 Brachybacterium Brachybacterium muris UCD-AY4 9 Brachybacterium Brachybacterium squillarum M-6-3 5 Brachybacterium Brachybacterium paraconglomeratum LC44 2 Brachybacterium Brachybacterium sp. P6-10-X1 1 Brachybacterium Brachybacterium phenoliresistens # 32 reads uniquely mapped to Bradyrhizobium (multi-hits among diff. species in Bradyrhizobium allowed) 19 Bradyrhizobium Bradyrhizobium elkanii USDA 76 2 Bradyrhizobium Bradyrhizobium oligotrophicum S58 2 Bradyrhizobium Bradyrhizobium neotropicale 2 Bradyrhizobium Bradyrhizobium valentinum 2 Bradyrhizobium Bradyrhizobium icense 1 Bradyrhizobium Bradyrhizobium sp. ORS 278 1 Bradyrhizobium Bradyrhizobium sp. LTSP885 1 Bradyrhizobium Bradyrhizobium sp. BTAi1 1 Bradyrhizobium Bradyrhizobium lablabi 1 Bradyrhizobium Bradyrhizobium sp. Tv2a-2 # 24 reads uniquely mapped to Brevundimonas (multi-hits among diff. species in Brevundimonas allowed) 9 Brevundimonas Brevundimonas diminuta ATCC 11568 3 Brevundimonas Brevundimonas sp. Leaf363 3 Brevundimonas Brevundimonas aveniformis DSM 17977 2 Brevundimonas Brevundimonas sp. GW460-12-10-14-LB2 2 Brevundimonas Brevundimonas naejangsanensis 2 Brevundimonas Brevundimonas subvibrioides ATCC 15264 1 Brevundimonas Brevundimonas sp. LM2 1 Brevundimonas Brevundimonas sp. DS20 1 Brevundimonas Brevundimonas sp. Root1279 # 17 reads uniquely mapped to Brochothrix (multi-hits among diff. species in Brochothrix allowed) 12 Brochothrix Brochothrix campestris FSL F6-1037 5 Brochothrix Brochothrix thermosphacta DSM 20171 = FSL F6-1036 # 45 reads uniquely mapped to Burkholderia (multi-hits among diff. species in Burkholderia allowed) 6 Burkholderia Candidatus Burkholderia crenata 5 Burkholderia Burkholderia gladioli 4 Burkholderia Burkholderia pseudomallei HBPUB10134a 3 Burkholderia Burkholderia cenocepacia 2 Burkholderia Burkholderia ambifaria AMMD 2 Burkholderia Burkholderia sp. PAMC 26561 2 Burkholderia Burkholderia sp. CCGE1001 2 Burkholderia Burkholderia pseudomallei 2 Burkholderia Burkholderia pseudomallei B03 1 Burkholderia Burkholderia pseudomallei NAU35A-3 1 Burkholderia Burkholderia glumae LMG 2196 = ATCC 33617 1 Burkholderia Burkholderia stabilis 1 Burkholderia Burkholderia sp. HB1 1 Burkholderia Burkholderia vietnamiensis 1 Burkholderia Burkholderia pseudomallei BPC006 1 Burkholderia Burkholderia dolosa AU0158 1 Burkholderia Burkholderia sp. CCGE1003 1 Burkholderia Burkholderia sp. JPY347 1 Burkholderia Burkholderia pseudomallei MSHR5848 1 Burkholderia Burkholderia pseudomultivorans 1 Burkholderia Burkholderia pseudomallei K42 1 Burkholderia Burkholderia thailandensis MSMB59 1 Burkholderia Burkholderia sp. YI23 1 Burkholderia Burkholderia pseudomallei MSHR520 1 Burkholderia Burkholderia sp. CCGE1002 1 Burkholderia Burkholderia gladioli BSR3 # 19 reads uniquely mapped to Campylobacter (multi-hits among diff. species in Campylobacter allowed) 10 Campylobacter Campylobacter concisus 13826 2 Campylobacter Campylobacter showae CSUNSWCD 1 Campylobacter Campylobacter mucosalis 1 Campylobacter Campylobacter coli 1 Campylobacter Campylobacter lari RM16712 1 Campylobacter Campylobacter lari 1 Campylobacter Campylobacter concisus 1 Campylobacter Campylobacter gracilis 1 Campylobacter Campylobacter sputorum biovar sputorum # 207 reads uniquely mapped to Capnocytophaga (multi-hits among diff. species in Capnocytophaga allowed) 59 Capnocytophaga Capnocytophaga ochracea DSM 7271 58 Capnocytophaga Capnocytophaga gingivalis ATCC 33624 48 Capnocytophaga Capnocytophaga sp. oral taxon 323 23 Capnocytophaga Capnocytophaga granulosa ATCC 51502 12 Capnocytophaga Capnocytophaga sp. oral taxon 338 str. F0234 6 Capnocytophaga Capnocytophaga sp. oral taxon 329 str. F0087 1 Capnocytophaga Capnocytophaga haemolytica # 99 reads uniquely mapped to Cardiobacterium (multi-hits among diff. species in Cardiobacterium allowed) 80 Cardiobacterium Cardiobacterium hominis ATCC 15826 19 Cardiobacterium Cardiobacterium valvarum F0432 # 20 reads uniquely mapped to Caulobacter (multi-hits among diff. species in Caulobacter allowed) 8 Caulobacter Caulobacter henricii 8 Caulobacter Caulobacter segnis ATCC 21756 1 Caulobacter Caulobacter vibrioides 1 Caulobacter Caulobacter sp. K31 1 Caulobacter Caulobacter crescentus NA1000 1 Caulobacter Caulobacter crescentus CB15 # 84 reads uniquely mapped to Cellulomonas (multi-hits among diff. species in Cellulomonas allowed) 74 Cellulomonas Cellulomonas flavigena 2 Cellulomonas Cellulomonas iranensis NBRC 101100 = JCM 18110 2 Cellulomonas Cellulomonas fimi ATCC 484 2 Cellulomonas Cellulomonas sp. Root930 1 Cellulomonas Cellulomonas sp. URHE0023 1 Cellulomonas Cellulomonas carbonis T26 1 Cellulomonas Cellulomonas flavigena DSM 20109 1 Cellulomonas Cellulomonas gilvus ATCC 13127 # 16 reads uniquely mapped to Chryseobacterium (multi-hits among diff. species in Chryseobacterium allowed) 3 Chryseobacterium Chryseobacterium halperniae 2 Chryseobacterium NZ_JASZ01000299 2 Chryseobacterium Chryseobacterium sp. IHB B 17019 1 Chryseobacterium NZ_JASZ01000086 1 Chryseobacterium Chryseobacterium solincola 1 Chryseobacterium Chryseobacterium vrystaatense 1 Chryseobacterium NZ_JASZ01000321 1 Chryseobacterium NZ_JASZ01000336 1 Chryseobacterium NZ_JASZ01000372 1 Chryseobacterium NZ_JASZ01000020 1 Chryseobacterium NZ_JASZ01000317 1 Chryseobacterium NZ_JASZ01000168 # 119 reads uniquely mapped to Comamonas (multi-hits among diff. species in Comamonas allowed) 83 Comamonas Comamonas aquatica 20 Comamonas Comamonas kerstersii 11 Comamonas Comamonas testosteroni TK102 1 Comamonas Comamonas granuli NBRC 101663 1 Comamonas Comamonas sp. B-9 1 Comamonas Comamonas composti DSM 21721 1 Comamonas Comamonas testosteroni CNB-2 1 Comamonas Comamonas testosteroni P19 # 76 reads uniquely mapped to Corynebacterium (multi-hits among diff. species in Corynebacterium allowed) 13 Corynebacterium Corynebacterium afermentans subsp. afermentans 7 Corynebacterium Corynebacterium imitans 5 Corynebacterium Corynebacterium sp. ATCC 6931 4 Corynebacterium Corynebacterium jeddahense 4 Corynebacterium Corynebacterium durum F0235 3 Corynebacterium Corynebacterium amycolatum SK46 3 Corynebacterium Corynebacterium accolens ATCC 49725 3 Corynebacterium Corynebacterium jeikeium K411 2 Corynebacterium Corynebacterium genitalium ATCC 33030 2 Corynebacterium Corynebacterium glutamicum 2 Corynebacterium Corynebacterium ureicelerivorans 2 Corynebacterium Corynebacterium aquilae DSM 44791 2 Corynebacterium Corynebacterium crudilactis 2 Corynebacterium Corynebacterium aurimucosum 2 Corynebacterium Corynebacterium oculi 1 Corynebacterium Corynebacterium tuscaniense DNF00037 1 Corynebacterium Corynebacterium variabile 1 Corynebacterium Corynebacterium pseudotuberculosis P54B96 1 Corynebacterium Corynebacterium doosanense CAU 212 = DSM 45436 1 Corynebacterium Corynebacterium riegelii 1 Corynebacterium Corynebacterium glutamicum ZL-6 1 Corynebacterium Corynebacterium phocae 1 Corynebacterium Corynebacterium camporealensis 1 Corynebacterium Corynebacterium falsenii DSM 44353 1 Corynebacterium Corynebacterium argentoratense DSM 44202 1 Corynebacterium Corynebacterium sp. NML98-0116 1 Corynebacterium Corynebacterium glucuronolyticum ATCC 51867 1 Corynebacterium Corynebacterium stationis 1 Corynebacterium Corynebacterium ciconiae DSM 44920 1 Corynebacterium Corynebacterium xerosis NBRC 16721 1 Corynebacterium Corynebacterium massiliense DSM 45435 1 Corynebacterium Corynebacterium urealyticum DSM 7109 1 Corynebacterium Corynebacterium sputi DSM 45148 1 Corynebacterium Corynebacterium falsenii 1 Corynebacterium Corynebacterium simulans # 30 reads uniquely mapped to Curvibacter (multi-hits among diff. species in Curvibacter allowed) 27 Curvibacter Curvibacter sp. PAE-UM 3 Curvibacter Curvibacter lanceolatus ATCC 14669 # 89 reads uniquely mapped to Cutibacterium (multi-hits among diff. species in Cutibacterium allowed) 31 Cutibacterium Cutibacterium acnes 7 Cutibacterium Propionibacterium acnes subsp. defendens ATCC 11828 6 Cutibacterium Propionibacterium acnes TypeIA2 P.acn33 6 Cutibacterium Propionibacterium acnes hdn-1 5 Cutibacterium Propionibacterium acnes KPA171202 5 Cutibacterium Propionibacterium acnes 6609 5 Cutibacterium Propionibacterium acnes HL096PA1 5 Cutibacterium Propionibacterium acnes SK137 3 Cutibacterium Propionibacterium acnes TypeIA2 P.acn31 3 Cutibacterium Propionibacterium acnes C1 3 Cutibacterium Propionibacterium acnes TypeIA2 P.acn17 2 Cutibacterium [Propionibacterium] namnetense SK182B-JCVI 2 Cutibacterium Cutibacterium granulosum DSM 20700 2 Cutibacterium Cutibacterium avidum 2 Cutibacterium Cutibacterium avidum 44067 1 Cutibacterium [Propionibacterium] humerusii P08 1 Cutibacterium Propionibacterium acnes 266 # 28 reads uniquely mapped to Deinococcus (multi-hits among diff. species in Deinococcus allowed) 6 Deinococcus Deinococcus wulumuqiensis R13 4 Deinococcus Deinococcus peraridilitoris DSM 19664 3 Deinococcus Deinococcus radiodurans R1 2 Deinococcus Deinococcus actinosclerus 2 Deinococcus Deinococcus geothermalis DSM 11300 2 Deinococcus Deinococcus marmoris DSM 12784 1 Deinococcus Deinococcus proteolyticus MRP 1 Deinococcus Deinococcus ficus DSM 19119 1 Deinococcus Deinococcus pimensis DSM 21231 1 Deinococcus Deinococcus sp. YIM 77859 1 Deinococcus Deinococcus deserti VCD115 1 Deinococcus Deinococcus gobiensis I-0 1 Deinococcus Deinococcus swuensis 1 Deinococcus Deinococcus soli Cha et al. 2016 1 Deinococcus Deinococcus maricopensis DSM 21211 # 65 reads uniquely mapped to Delftia (multi-hits among diff. species in Delftia allowed) 23 Delftia Delftia acidovorans SPH-1 17 Delftia Delftia sp. Cs1-4 15 Delftia Delftia sp. HK171 10 Delftia Delftia tsuruhatensis # 13 reads uniquely mapped to Dermacoccus (multi-hits among diff. species in Dermacoccus allowed) 10 Dermacoccus Dermacoccus nishinomiyaensis 3 Dermacoccus Dermacoccus sp. PE3 # 33 reads uniquely mapped to Eikenella (multi-hits among diff. species in Eikenella allowed) 33 Eikenella Eikenella corrodens ATCC 23834 # 37 reads uniquely mapped to Enterobacter (multi-hits among diff. species in Enterobacter allowed) 9 Enterobacter Enterobacter cloacae 4 Enterobacter Enterobacter sp. 638 3 Enterobacter Enterobacter hormaechei subsp. oharae 2 Enterobacter Enterobacter cloacae subsp. cloacae ATCC 13047 2 Enterobacter Enterobacter kobei 2 Enterobacter Enterobacter asburiae 2 Enterobacter Enterobacter cloacae ECR091 2 Enterobacter Enterobacter sp. HK169 1 Enterobacter Enterobacter hormaechei subsp. steigerwaltii 1 Enterobacter Enterobacter lignolyticus SCF1 1 Enterobacter Enterobacter cloacae complex 'Hoffmann cluster III' 1 Enterobacter Enterobacter sp. E20 1 Enterobacter Enterobacter asburiae LF7a 1 Enterobacter Enterobacter cloacae EcWSU1 1 Enterobacter Enterobacter cloacae complex 'Hoffmann cluster IV' 1 Enterobacter Enterobacter xiangfangensis 1 Enterobacter Enterobacter sp. R4-368 1 Enterobacter Enterobacter cloacae subsp. cloacae ENHKU01 1 Enterobacter Enterobacter sp. ODB01 # 4406 reads uniquely mapped to Flavobacterium (multi-hits among diff. species in Flavobacterium allowed) 4396 Flavobacterium Flavobacterium succinicans LMG 10402 6 Flavobacterium Flavobacterium sasangense DSM 21067 1 Flavobacterium Flavobacterium sp. 316 1 Flavobacterium Flavobacterium hydatis 1 Flavobacterium Flavobacterium columnare ATCC 49512 1 Flavobacterium Flavobacterium johnsoniae # 7 reads uniquely mapped to Fusobacterium (multi-hits among diff. species in Fusobacterium allowed) 2 Fusobacterium Fusobacterium nucleatum subsp. vincentii 3_1_27 2 Fusobacterium Fusobacterium periodonticum 2_1_31 1 Fusobacterium Fusobacterium nucleatum subsp. animalis 7_1 1 Fusobacterium Fusobacterium hwasookii ChDC F174 1 Fusobacterium Fusobacterium mortiferum ATCC 9817 # 8 reads uniquely mapped to Gardnerella (multi-hits among diff. species in Gardnerella allowed) 3 Gardnerella Gardnerella vaginalis ATCC 14018 = JCM 11026 2 Gardnerella Gardnerella vaginalis 1 Gardnerella Gardnerella vaginalis HMP9231 1 Gardnerella Gardnerella vaginalis ATCC 14019 1 Gardnerella Gardnerella vaginalis 409-05 # 16 reads uniquely mapped to Gordonia (multi-hits among diff. species in Gordonia allowed) 3 Gordonia Gordonia kroppenstedtii DSM 45133 3 Gordonia Gordonia araii NBRC 100433 2 Gordonia Gordonia sp. KTR9 2 Gordonia Gordonia bronchialis DSM 43247 1 Gordonia Gordonia malaquae NBRC 108250 1 Gordonia Gordonia polyisoprenivorans VH2 1 Gordonia Gordonia desulfuricans NBRC 100010 1 Gordonia Gordonia terrae 1 Gordonia Gordonia effusa NBRC 100432 1 Gordonia Gordonia shandongensis DSM 45094 # 25 reads uniquely mapped to Haemophilus (multi-hits among diff. species in Haemophilus allowed) 6 Haemophilus [Haemophilus] ducreyi 4 Haemophilus Haemophilus influenzae 3 Haemophilus Haemophilus parainfluenzae T3T1 2 Haemophilus Haemophilus sputorum CCUG 13788 2 Haemophilus Haemophilus influenzae Rd KW20 2 Haemophilus Haemophilus ducreyi 35000HP 1 Haemophilus Haemophilus influenzae F3047 1 Haemophilus Haemophilus influenzae KR494 1 Haemophilus Haemophilus influenzae 10810 1 Haemophilus Haemophilus parasuis SH0165 1 Haemophilus NC_009566 1 Haemophilus Haemophilus influenzae R2846 # 16 reads uniquely mapped to Hymenobacter (multi-hits among diff. species in Hymenobacter allowed) 10 Hymenobacter Hymenobacter terrenus 2 Hymenobacter Hymenobacter swuensis DY53 1 Hymenobacter Hymenobacter sp. DG25A 1 Hymenobacter Hymenobacter sp. PAMC 26554 1 Hymenobacter Hymenobacter sp. PAMC 26628 1 Hymenobacter Hymenobacter sp. IS2118 # 15 reads uniquely mapped to Janibacter (multi-hits among diff. species in Janibacter allowed) 8 Janibacter Janibacter sp. HTCC2649 4 Janibacter Janibacter sp. Soil728 2 Janibacter Janibacter terrae 1 Janibacter Janibacter hoylei PVAS-1 # 37 reads uniquely mapped to Kingella (multi-hits among diff. species in Kingella allowed) 21 Kingella NZ_LN869922 12 Kingella Kingella denitrificans ATCC 33394 4 Kingella Kingella oralis ATCC 51147 # 16 reads uniquely mapped to Knoellia (multi-hits among diff. species in Knoellia allowed) 7 Knoellia Knoellia aerolata DSM 18566 5 Knoellia Knoellia flava TL1 3 Knoellia Knoellia sp. Soil729 1 Knoellia Knoellia subterranea KCTC 19937 # 24 reads uniquely mapped to Kocuria (multi-hits among diff. species in Kocuria allowed) 6 Kocuria Kocuria marina 6 Kocuria Kocuria palustris 5 Kocuria Kocuria kristinae 4 Kocuria Kocuria turfanensis 2 Kocuria Kocuria rhizophila DC2201 1 Kocuria Kocuria polaris # 13 reads uniquely mapped to Lachnoanaerobaculum (multi-hits among diff. species in Lachnoanaerobaculum allowed) 11 Lachnoanaerobaculum Lachnoanaerobaculum sp. OBRC5-5 2 Lachnoanaerobaculum Lachnoanaerobaculum saburreum DSM 3986 # 41 reads uniquely mapped to Lactobacillus (multi-hits among diff. species in Lactobacillus allowed) 8 Lactobacillus Lactobacillus selangorensis 4 Lactobacillus Lactobacillus ozensis DSM 23829 = JCM 17196 2 Lactobacillus Lactobacillus acidifarinae DSM 19394 2 Lactobacillus Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 2 Lactobacillus Lactobacillus acidipiscis KCTC 13900 2 Lactobacillus Lactobacillus dextrinicus DSM 20335 2 Lactobacillus Lactobacillus sanfranciscensis TMW 1.1304 2 Lactobacillus Lactobacillus kunkeei 2 Lactobacillus Lactobacillus sakei subsp. sakei 23K 1 Lactobacillus Lactobacillus rennini DSM 20253 1 Lactobacillus Lactobacillus plantarum 1 Lactobacillus Lactobacillus helveticus 1 Lactobacillus Lactobacillus helveticus H9 1 Lactobacillus Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 1 Lactobacillus Lactobacillus concavus DSM 17758 1 Lactobacillus Lactobacillus amylovorus 1 Lactobacillus Lactobacillus acidipiscis 1 Lactobacillus Lactobacillus plantarum WCFS1 1 Lactobacillus Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 1 Lactobacillus Lactobacillus curvatus 1 Lactobacillus Lactobacillus backii 1 Lactobacillus Lactobacillus salivarius 1 Lactobacillus Lactobacillus delbrueckii subsp. bulgaricus 1 Lactobacillus Lactobacillus salivarius UCC118 # 70 reads uniquely mapped to Lautropia (multi-hits among diff. species in Lautropia allowed) 70 Lautropia Lautropia mirabilis ATCC 51599 # 19 reads uniquely mapped to Leifsonia (multi-hits among diff. species in Leifsonia allowed) 8 Leifsonia Leifsonia xyli 2 Leifsonia Leifsonia sp. Root1293 2 Leifsonia Leifsonia sp. Root227 2 Leifsonia Leifsonia sp. Leaf336 2 Leifsonia Leifsonia sp. Root4 1 Leifsonia Leifsonia xyli subsp. xyli str. CTCB07 1 Leifsonia Leifsonia rubra CMS 76R 1 Leifsonia Leifsonia aquatica ATCC 14665 # 9 reads uniquely mapped to Leptotrichia (multi-hits among diff. species in Leptotrichia allowed) 3 Leptotrichia Leptotrichia goodfellowii DSM 19756 3 Leptotrichia Leptotrichia sp. oral taxon 212 3 Leptotrichia Leptotrichia buccalis C-1013-b # 12 reads uniquely mapped to Leuconostoc (multi-hits among diff. species in Leuconostoc allowed) 2 Leuconostoc Leuconostoc mesenteroides subsp. suionicum 2 Leuconostoc Leuconostoc mesenteroides KFRI-MG 2 Leuconostoc Leuconostoc kimchii IMSNU 11154 1 Leuconostoc Leuconostoc sp. C2 1 Leuconostoc Leuconostoc lactis 1 Leuconostoc Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 1 Leuconostoc Leuconostoc gelidum subsp. gasicomitatum KG16-1 1 Leuconostoc Leuconostoc citreum KM20 1 Leuconostoc Leuconostoc mesenteroides subsp. mesenteroides # 47 reads uniquely mapped to Lysobacter (multi-hits among diff. species in Lysobacter allowed) 18 Lysobacter Lysobacter sp. A03 6 Lysobacter Lysobacter concretionis Ko07 = DSM 16239 5 Lysobacter Lysobacter dokdonensis DS-58 5 Lysobacter Lysobacter antibioticus 4 Lysobacter Lysobacter daejeonensis GH1-9 3 Lysobacter Lysobacter gummosus 2 Lysobacter Lysobacter capsici 2 Lysobacter Lysobacter sp. Root96 1 Lysobacter Lysobacter sp. Root494 1 Lysobacter Lysobacter enzymogenes # 14 reads uniquely mapped to Marmoricola (multi-hits among diff. species in Marmoricola allowed) 9 Marmoricola Marmoricola sp. Leaf446 4 Marmoricola Marmoricola aequoreus 1 Marmoricola Marmoricola sp. URHB0036 # 40 reads uniquely mapped to Massilia (multi-hits among diff. species in Massilia allowed) 9 Massilia Massilia sp. NR 4-1 8 Massilia Massilia sp. WG5 7 Massilia Massilia sp. 9096 6 Massilia Massilia timonae 5 Massilia Massilia putida 3 Massilia Massilia sp. Leaf139 1 Massilia Massilia niastensis DSM 21313 1 Massilia Massilia alkalitolerans DSM 17462 # 40 reads uniquely mapped to Megasphaera (multi-hits among diff. species in Megasphaera allowed) 16 Megasphaera Megasphaera micronuciformis F0359 6 Megasphaera Megasphaera genomosp. type_1 str. 28L 5 Megasphaera Megasphaera cerevisiae DSM 20462 5 Megasphaera Megasphaera elsdenii 14-14 4 Megasphaera Megasphaera massiliensis 2 Megasphaera Megasphaera elsdenii DSM 20460 1 Megasphaera Megasphaera sp. UPII 135-E 1 Megasphaera Megasphaera sp. BV3C16-1 # 4342 reads uniquely mapped to Mesorhizobium (multi-hits among diff. species in Mesorhizobium allowed) 2222 Mesorhizobium Mesorhizobium plurifarium 2105 Mesorhizobium Mesorhizobium sp. ORS3324 4 Mesorhizobium Mesorhizobium sp. UASWS1009 2 Mesorhizobium Mesorhizobium sp. LC103 2 Mesorhizobium Mesorhizobium sp. B7 1 Mesorhizobium Mesorhizobium australicum WSM2073 1 Mesorhizobium Mesorhizobium opportunistum WSM2075 1 Mesorhizobium Mesorhizobium sp. Root1471 1 Mesorhizobium Mesorhizobium ciceri biovar biserrulae 1 Mesorhizobium Mesorhizobium ciceri biovar biserrulae WSM1271 1 Mesorhizobium Mesorhizobium sp. Root157 1 Mesorhizobium Mesorhizobium sp. NBIMC_P2-C3 # 29 reads uniquely mapped to Methylobacterium (multi-hits among diff. species in Methylobacterium allowed) 4 Methylobacterium Methylobacterium extorquens AM1 4 Methylobacterium Methylobacterium populi BJ001 3 Methylobacterium Methylobacterium sp. Leaf89 3 Methylobacterium Methylobacterium aquaticum 2 Methylobacterium Methylobacterium nodulans ORS 2060 2 Methylobacterium Methylobacterium sp. Leaf456 2 Methylobacterium Methylobacterium sp. 77 2 Methylobacterium Methylobacterium extorquens DM4 2 Methylobacterium Methylobacterium populi 1 Methylobacterium Methylobacterium phyllosphaerae 1 Methylobacterium Methylobacterium sp. AMS5 1 Methylobacterium Methylobacterium extorquens 1 Methylobacterium Methylobacterium extorquens PA1 1 Methylobacterium Methylobacterium extorquens CM4 # 4360 reads uniquely mapped to Microbacterium (multi-hits among diff. species in Microbacterium allowed) 4333 Microbacterium Microbacterium sp. C448 5 Microbacterium Microbacterium aurum 3 Microbacterium Microbacterium ginsengisoli 3 Microbacterium Microbacterium gorillae 2 Microbacterium Microbacterium hominis NBRC 15708 2 Microbacterium Microbacterium sp. 1.5R 2 Microbacterium Microbacterium luticocti DSM 19459 1 Microbacterium Microbacterium maritypicum MF109 1 Microbacterium Microbacterium oleivorans NBRC 103075 1 Microbacterium Microbacterium sp. Root180 1 Microbacterium Microbacterium sp. Root53 1 Microbacterium Microbacterium sp. CGR1 1 Microbacterium Microbacterium azadirachtae 1 Microbacterium Microbacterium testaceum StLB037 1 Microbacterium Microbacterium sp. XT11 1 Microbacterium Microbacterium sp. Root61 1 Microbacterium Microbacterium paludicola # 19 reads uniquely mapped to Micrococcus (multi-hits among diff. species in Micrococcus allowed) 19 Micrococcus Micrococcus luteus NCTC 2665 # 29 reads uniquely mapped to Mitsuaria (multi-hits among diff. species in Mitsuaria allowed) 29 Mitsuaria Mitsuaria sp. 7 # 29 reads uniquely mapped to Modestobacter (multi-hits among diff. species in Modestobacter allowed) 18 Modestobacter Modestobacter caceresii 8 Modestobacter Modestobacter marinus 3 Modestobacter Modestobacter sp. Leaf380 # 60 reads uniquely mapped to Moraxella (multi-hits among diff. species in Moraxella allowed) 31 Moraxella Moraxella osloensis 10 Moraxella Moraxella bovoculi 8 Moraxella Moraxella macacae 0408225 6 Moraxella Moraxella catarrhalis 3 Moraxella Moraxella ovis 1 Moraxella Moraxella catarrhalis BBH18 1 Moraxella Moraxella boevrei DSM 14165 # 4425 reads uniquely mapped to Mycobacterium (multi-hits among diff. species in Mycobacterium allowed) 2204 Mycobacterium Mycobacterium cosmeticum 2192 Mycobacterium Mycobacterium aurum 6 Mycobacterium Mycobacterium bovis BCG str. Tokyo 172 2 Mycobacterium Mycobacterium abscessus subsp. abscessus 2 Mycobacterium Mycobacterium sp. YC-RL4 1 Mycobacterium Mycobacterium heckeshornense 1 Mycobacterium Mycobacterium fortuitum 1 Mycobacterium Mycobacterium parascrofulaceum ATCC BAA-614 1 Mycobacterium Mycobacterium rhodesiae NBB3 1 Mycobacterium Mycobacterium abscessus subsp. massiliense str. GO 06 1 Mycobacterium Mycobacterium iranicum UM_TJL 1 Mycobacterium Mycobacterium sp. djl-10 1 Mycobacterium Mycobacterium indicus pranii MTCC 9506 1 Mycobacterium Mycobacterium mucogenicum 1 Mycobacterium Mycobacterium abscessus subsp. bolletii 1 Mycobacterium Mycobacterium chlorophenolicum 1 Mycobacterium Mycobacterium avium subsp. hominissuis 1 Mycobacterium Mycobacterium smegmatis str. MC2 155 1 Mycobacterium Mycobacterium tuberculosis H37Ra 1 Mycobacterium Mycobacterium sp. 155 1 Mycobacterium Mycobacterium kyorinense 1 Mycobacterium Mycobacterium sp. QIA-37 1 Mycobacterium Mycobacterium simiae 1 Mycobacterium Mycobacterium chelonae CCUG 47445 # 213 reads uniquely mapped to Neisseria (multi-hits among diff. species in Neisseria allowed) 105 Neisseria Neisseria arctica 37 Neisseria Neisseria sicca 20 Neisseria Neisseria meningitidis 19 Neisseria Neisseria elongata subsp. glycolytica ATCC 29315 12 Neisseria Neisseria mucosa C102 5 Neisseria Neisseria bacilliformis ATCC BAA-1200 4 Neisseria Neisseria gonorrhoeae 3 Neisseria Neisseria cinerea ATCC 14685 2 Neisseria Neisseria meningitidis WUE 2594 1 Neisseria Neisseria meningitidis FAM18 1 Neisseria Neisseria gonorrhoeae MS11 1 Neisseria Neisseria meningitidis M04-240196 1 Neisseria Neisseria meningitidis G2136 1 Neisseria Neisseria meningitidis Z2491 1 Neisseria Neisseria meningitidis 053442 # 8 reads uniquely mapped to Nitrospira (multi-hits among diff. species in Nitrospira allowed) 4 Nitrospira Nitrospira defluvii 2 Nitrospira Nitrospira japonica 1 Nitrospira Nitrospira moscoviensis 1 Nitrospira Candidatus Nitrospira inopinata # 17 reads uniquely mapped to Nocardioides (multi-hits among diff. species in Nocardioides allowed) 4 Nocardioides Nocardioides sp. URHA0020 4 Nocardioides Nocardioides sp. Root151 2 Nocardioides Nocardioides dokdonensis FR1436 2 Nocardioides Nocardioides sp. Root682 1 Nocardioides Nocardioides sp. Soil774 1 Nocardioides Nocardioides sp. J54 1 Nocardioides Nocardioides luteus 1 Nocardioides Nocardioides sp. Soil805 1 Nocardioides Nocardioides sp. Soil797 # 22 reads uniquely mapped to Nocardiopsis (multi-hits among diff. species in Nocardiopsis allowed) 7 Nocardiopsis Nocardiopsis kunsanensis DSM 44524 3 Nocardiopsis Nocardiopsis alkaliphila YIM 80379 2 Nocardiopsis Nocardiopsis gilva YIM 90087 2 Nocardiopsis Nocardiopsis salina YIM 90010 2 Nocardiopsis Nocardiopsis potens DSM 45234 2 Nocardiopsis Nocardiopsis alba ATCC BAA-2165 1 Nocardiopsis Nocardiopsis baichengensis YIM 90130 1 Nocardiopsis Nocardiopsis sp. CNT312 1 Nocardiopsis Nocardiopsis ganjiahuensis DSM 45031 1 Nocardiopsis Nocardiopsis xinjiangensis YIM 90004 # 23 reads uniquely mapped to Novosphingobium (multi-hits among diff. species in Novosphingobium allowed) 11 Novosphingobium Novosphingobium sp. Leaf2 4 Novosphingobium Novosphingobium lindaniclasticum LE124 2 Novosphingobium Novosphingobium sp. AAP83 1 Novosphingobium Novosphingobium malaysiense 1 Novosphingobium Novosphingobium sp. MBES04 1 Novosphingobium Novosphingobium acidiphilum DSM 19966 1 Novosphingobium Novosphingobium barchaimii LL02 1 Novosphingobium Novosphingobium sp. PP1Y 1 Novosphingobium Novosphingobium tardaugens NBRC 16725 # 12 reads uniquely mapped to Ochrobactrum (multi-hits among diff. species in Ochrobactrum allowed) 5 Ochrobactrum Ochrobactrum pituitosum 3 Ochrobactrum Ochrobactrum pseudogrignonense 2 Ochrobactrum Ochrobactrum anthropi ATCC 49188 2 Ochrobactrum Ochrobactrum anthropi # 21 reads uniquely mapped to Olsenella (multi-hits among diff. species in Olsenella allowed) 11 Olsenella Olsenella uli DSM 7084 2 Olsenella Olsenella profusa F0195 2 Olsenella Olsenella sp. Marseille-P2300 2 Olsenella Olsenella scatoligenes 2 Olsenella Olsenella sp. oral taxon 807 1 Olsenella Olsenella sp. SIT9 1 Olsenella Olsenella sp. oral taxon 809 str. F0356 # 11 reads uniquely mapped to Oribacterium (multi-hits among diff. species in Oribacterium allowed) 5 Oribacterium Oribacterium parvum ACB1 4 Oribacterium Oribacterium sp. oral taxon 078 str. F0262 2 Oribacterium Oribacterium sinus F0268 # 48 reads uniquely mapped to Ottowia (multi-hits among diff. species in Ottowia allowed) 33 Ottowia Ottowia sp. oral taxon 894 15 Ottowia Ottowia thiooxydans DSM 14619 # 24 reads uniquely mapped to Paracoccus (multi-hits among diff. species in Paracoccus allowed) 10 Paracoccus Paracoccus sphaerophysae 5 Paracoccus Paracoccus sp. 228 3 Paracoccus Paracoccus aminophilus JCM 7686 1 Paracoccus Paracoccus denitrificans PD1222 1 Paracoccus Paracoccus sanguinis 1 Paracoccus Paracoccus aminovorans 1 Paracoccus Paracoccus yeei ATCC BAA-599 1 Paracoccus Paracoccus yeei 1 Paracoccus Paracoccus sp. J55 # 13 reads uniquely mapped to Parvimonas (multi-hits among diff. species in Parvimonas allowed) 13 Parvimonas Parvimonas micra # 29 reads uniquely mapped to Pectobacterium (multi-hits among diff. species in Pectobacterium allowed) 8 Pectobacterium Pectobacterium atrosepticum 4 Pectobacterium Pectobacterium carotovorum subsp. brasiliense 4 Pectobacterium Pectobacterium atrosepticum SCRI1043 4 Pectobacterium Pectobacterium carotovorum subsp. carotovorum PCC21 3 Pectobacterium Pectobacterium parmentieri WPP163 3 Pectobacterium Pectobacterium carotovorum subsp. carotovorum PC1 2 Pectobacterium Pectobacterium parmentieri 1 Pectobacterium Pectobacterium sp. SCC3193 # 123 reads uniquely mapped to Pelomonas (multi-hits among diff. species in Pelomonas allowed) 123 Pelomonas Pelomonas sp. Root662 # 24 reads uniquely mapped to Phycicoccus (multi-hits among diff. species in Phycicoccus allowed) 14 Phycicoccus Phycicoccus jejuensis 5 Phycicoccus Phycicoccus sp. Root563 4 Phycicoccus Phycicoccus sp. Soil748 1 Phycicoccus Phycicoccus sp. Soil803 # 17 reads uniquely mapped to Plantibacter (multi-hits among diff. species in Plantibacter allowed) 17 Plantibacter Plantibacter sp. Leaf314 # 11 reads uniquely mapped to Porphyromonas (multi-hits among diff. species in Porphyromonas allowed) 7 Porphyromonas Porphyromonas somerae 1 Porphyromonas Porphyromonas gingivalis ATCC 33277 1 Porphyromonas Porphyromonas somerae DSM 23386 1 Porphyromonas Porphyromonas gingivicanis JCM 15907 1 Porphyromonas Porphyromonas sp. COT-290 OH3588 # 64 reads uniquely mapped to Prevotella (multi-hits among diff. species in Prevotella allowed) 18 Prevotella Prevotella salivae DSM 15606 16 Prevotella Prevotella melaninogenica ATCC 25845 14 Prevotella Prevotella sp. S7 MS 2 7 Prevotella Prevotella scopos JCM 17725 2 Prevotella Prevotella oulorum JCM 14966 1 Prevotella Prevotella enoeca 1 Prevotella Prevotella pallens ATCC 700821 1 Prevotella Prevotella histicola JCM 15637 = DNF00424 1 Prevotella Prevotella sp. oral taxon 299 str. F0039 1 Prevotella Prevotella intermedia ATCC 25611 = DSM 20706 1 Prevotella Prevotella sp. 10(H) 1 Prevotella Prevotella oryzae DSM 17970 # 14 reads uniquely mapped to Propionibacterium (multi-hits among diff. species in Propionibacterium allowed) 6 Propionibacterium Propionibacterium sp. oral taxon 193 4 Propionibacterium Propionibacterium sp. oral taxon 192 str. F0372 2 Propionibacterium Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 2 Propionibacterium Propionibacterium freudenreichii subsp. shermanii # 33 reads uniquely mapped to Providencia (multi-hits among diff. species in Providencia allowed) 12 Providencia Providencia stuartii 12 Providencia Providencia stuartii MRSN 2154 7 Providencia Providencia rettgeri 2 Providencia Providencia sneebia DSM 19967 # 29 reads uniquely mapped to Pseudacidovorax (multi-hits among diff. species in Pseudacidovorax allowed) 29 Pseudacidovorax Pseudacidovorax intermedius # 15 reads uniquely mapped to Pseudoglutamicibacter (multi-hits among diff. species in Pseudoglutamicibacter allowed) 15 Pseudoglutamicibacter Pseudoglutamicibacter albus DNF00011 # 4447 reads uniquely mapped to Pseudomonas (multi-hits among diff. species in Pseudomonas allowed) 4287 Pseudomonas Pseudomonas pelagia CL-AP6 62 Pseudomonas Pseudomonas stutzeri CCUG 29243 11 Pseudomonas Pseudomonas stutzeri 8 Pseudomonas Pseudomonas aeruginosa 8 Pseudomonas Pseudomonas stutzeri RCH2 6 Pseudomonas Pseudomonas alkylphenolica 6 Pseudomonas Pseudomonas putida 3 Pseudomonas Pseudomonas putida GB-1 3 Pseudomonas Pseudomonas sp. FGI182 2 Pseudomonas Pseudomonas sp. LPH1 2 Pseudomonas NZ_CP008869 2 Pseudomonas Pseudomonas psychrotolerans 2 Pseudomonas Pseudomonas putida S13.1.2 2 Pseudomonas Pseudomonas azotoformans 2 Pseudomonas Pseudomonas fuscovaginae ICMP 5940 2 Pseudomonas Pseudomonas sp. TCU-HL1 2 Pseudomonas Pseudomonas veronii 2 Pseudomonas Pseudomonas sp. URMO17WK12:I11 2 Pseudomonas Pseudomonas citronellolis 1 Pseudomonas Pseudomonas mosselii SJ10 1 Pseudomonas Pseudomonas aeruginosa PA7 1 Pseudomonas Pseudomonas sp. CCOS 191 1 Pseudomonas Pseudomonas sp. UW4 1 Pseudomonas Pseudomonas pseudoalcaligenes CECT 5344 1 Pseudomonas Pseudomonas koreensis 1 Pseudomonas Pseudomonas pseudoalcaligenes 1 Pseudomonas Pseudomonas putida F1 1 Pseudomonas Pseudomonas stutzeri A1501 1 Pseudomonas Pseudomonas fluorescens A506 1 Pseudomonas Pseudomonas chlororaphis subsp. aurantiaca 1 Pseudomonas Pseudomonas putida KT2440 1 Pseudomonas Pseudomonas mendocina S5.2 1 Pseudomonas Pseudomonas knackmussii B13 1 Pseudomonas Pseudomonas sp. TKP 1 Pseudomonas Pseudomonas frederiksbergensis 1 Pseudomonas Pseudomonas chlororaphis 1 Pseudomonas Pseudomonas fluorescens 1 Pseudomonas Pseudomonas resinovorans NBRC 106553 1 Pseudomonas Pseudomonas sp. MS586 1 Pseudomonas Pseudomonas balearica DSM 6083 1 Pseudomonas Pseudomonas massiliensis 1 Pseudomonas Pseudomonas protegens 1 Pseudomonas Pseudomonas poae RE*1-1-14 1 Pseudomonas Pseudomonas sp. S-6-2 1 Pseudomonas Pseudomonas putida BIRD-1 1 Pseudomonas Pseudomonas plecoglossicida 1 Pseudomonas Pseudomonas fragi 1 Pseudomonas Pseudomonas sp. CC6-YY-74 1 Pseudomonas Pseudomonas aeruginosa NCGM2.S1 1 Pseudomonas Pseudomonas alcaliphila JAB1 1 Pseudomonas Pseudomonas stutzeri DSM 4166 1 Pseudomonas Pseudomonas sp. Os17 # 12 reads uniquely mapped to Pseudopropionibacterium (multi-hits among diff. species in Pseudopropionibacterium allowed) 12 Pseudopropionibacterium Pseudopropionibacterium propionicum F0230a # 31 reads uniquely mapped to Pseudoxanthomonas (multi-hits among diff. species in Pseudoxanthomonas allowed) 9 Pseudoxanthomonas Pseudoxanthomonas suwonensis 6 Pseudoxanthomonas Pseudoxanthomonas suwonensis 11-1 6 Pseudoxanthomonas Pseudoxanthomonas suwonensis J47 5 Pseudoxanthomonas Pseudoxanthomonas spadix BD-a59 3 Pseudoxanthomonas Pseudoxanthomonas mexicana 2 Pseudoxanthomonas Pseudoxanthomonas dokdonensis # 26 reads uniquely mapped to Psychrobacter (multi-hits among diff. species in Psychrobacter allowed) 8 Psychrobacter Psychrobacter sp. AntiMn-1 4 Psychrobacter Psychrobacter sp. P11G5 3 Psychrobacter Psychrobacter sp. DAB_AL43B 2 Psychrobacter Psychrobacter sp. G 2 Psychrobacter Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152 2 Psychrobacter Psychrobacter lutiphocae DSM 21542 2 Psychrobacter Psychrobacter sp. P2G3 1 Psychrobacter Psychrobacter sp. PRwf-1 1 Psychrobacter Psychrobacter sp. P11F6 1 Psychrobacter Psychrobacter alimentarius # 66 reads uniquely mapped to Ralstonia (multi-hits among diff. species in Ralstonia allowed) 32 Ralstonia Ralstonia insidiosa 11 Ralstonia Ralstonia solanacearum 5 Ralstonia Ralstonia pickettii 12J 4 Ralstonia Ralstonia sp. PBA 3 Ralstonia Ralstonia solanacearum PSI07 3 Ralstonia Ralstonia pickettii 12D 2 Ralstonia Ralstonia mannitolilytica 2 Ralstonia Ralstonia solanacearum FJAT-1458 2 Ralstonia Ralstonia solanacearum OE1-1 2 Ralstonia Ralstonia solanacearum Po82 # 30 reads uniquely mapped to Rheinheimera (multi-hits among diff. species in Rheinheimera allowed) 13 Rheinheimera Rheinheimera sp. KL1 8 Rheinheimera Rheinheimera texasensis DSM 17496 7 Rheinheimera Rheinheimera baltica DSM 14885 2 Rheinheimera Rheinheimera perlucida DSM 18276 # 32 reads uniquely mapped to Rhizobacter (multi-hits among diff. species in Rhizobacter allowed) 14 Rhizobacter Rhizobacter sp. Root29 10 Rhizobacter Rhizobacter sp. Root404 8 Rhizobacter Rhizobacter sp. Root1221 # 32 reads uniquely mapped to Rhodococcus (multi-hits among diff. species in Rhodococcus allowed) 6 Rhodococcus Rhodococcus sp. 008 4 Rhodococcus Rhodococcus sp. p52 4 Rhodococcus Rhodococcus sp. YL-1 3 Rhodococcus Rhodococcus aetherivorans 3 Rhodococcus Rhodococcus fascians D188 2 Rhodococcus Rhodococcus sp. PBTS 1 2 Rhodococcus Rhodococcus pyridinivorans SB3094 2 Rhodococcus Rhodococcus erythropolis 2 Rhodococcus Rhodococcus sp. WB1 1 Rhodococcus Rhodococcus sp. PBTS 2 1 Rhodococcus NZ_BBEW01000816 1 Rhodococcus Rhodococcus erythropolis PR4 1 Rhodococcus Rhodococcus opacus # 26 reads uniquely mapped to Richelia (multi-hits among diff. species in Richelia allowed) 26 Richelia Richelia intracellularis HH01 # 10 reads uniquely mapped to Roseomonas (multi-hits among diff. species in Roseomonas allowed) 6 Roseomonas Roseomonas gilardii 4 Roseomonas Roseomonas cervicalis ATCC 49957 # 622 reads uniquely mapped to Rothia (multi-hits among diff. species in Rothia allowed) 343 Rothia Rothia dentocariosa 156 Rothia Rothia mucilaginosa 87 Rothia Rothia mucilaginosa DY-18 36 Rothia Rothia dentocariosa ATCC 17931 # 9 reads uniquely mapped to Rubellimicrobium (multi-hits among diff. species in Rubellimicrobium allowed) 5 Rubellimicrobium Rubellimicrobium mesophilum DSM 19309 4 Rubellimicrobium Rubellimicrobium thermophilum DSM 16684 # 27 reads uniquely mapped to Ruminococcus (multi-hits among diff. species in Ruminococcus allowed) 10 Ruminococcus Ruminococcus albus 7 = DSM 20455 6 Ruminococcus Ruminococcus lactaris ATCC 29176 3 Ruminococcus Ruminococcus sp. HUN007 2 Ruminococcus Ruminococcus flavefaciens ATCC 19208 2 Ruminococcus Ruminococcus champanellensis 18P13 = JCM 17042 2 Ruminococcus Ruminococcus callidus ATCC 27760 1 Ruminococcus Ruminococcus flavefaciens FD-1 1 Ruminococcus Ruminococcus bicirculans # 32 reads uniquely mapped to Selenomonas (multi-hits among diff. species in Selenomonas allowed) 17 Selenomonas Selenomonas ruminantium AB3002 4 Selenomonas Selenomonas sp. oral taxon 136 4 Selenomonas Selenomonas ruminantium subsp. lactilytica TAM6421 2 Selenomonas Selenomonas ruminantium 2 Selenomonas Selenomonas sputigena ATCC 35185 2 Selenomonas Selenomonas sp. oral taxon 478 1 Selenomonas Selenomonas noxia ATCC 43541 # 35 reads uniquely mapped to Serratia (multi-hits among diff. species in Serratia allowed) 7 Serratia Serratia marcescens 5 Serratia Serratia sp. ATCC 39006 4 Serratia Serratia liquefaciens 3 Serratia Serratia fonticola 3 Serratia Serratia plymuthica AS9 2 Serratia Serratia marcescens WW4 2 Serratia Serratia marcescens SM39 2 Serratia Serratia rubidaea 2 Serratia Serratia sp. FS14 1 Serratia Serratia plymuthica PRI-2C 1 Serratia Serratia proteamaculans 568 1 Serratia Serratia plymuthica 4Rx13 1 Serratia Serratia marcescens subsp. marcescens Db11 1 Serratia Serratia plymuthica # 36 reads uniquely mapped to Shewanella (multi-hits among diff. species in Shewanella allowed) 5 Shewanella Shewanella sp. ANA-3 5 Shewanella Shewanella violacea DSS12 4 Shewanella Shewanella baltica OS195 4 Shewanella Shewanella oneidensis MR-1 3 Shewanella Shewanella baltica OS185 2 Shewanella Shewanella baltica OS223 2 Shewanella Shewanella japonica 2 Shewanella Shewanella frigidimarina NCIMB 400 2 Shewanella Shewanella amazonensis SB2B 1 Shewanella Shewanella sediminis HAW-EB3 1 Shewanella Shewanella mangrovi 1 Shewanella Shewanella woodyi ATCC 51908 1 Shewanella Shewanella sp. MR-4 1 Shewanella Shewanella sp. W3-18-1 1 Shewanella Shewanella psychrophila 1 Shewanella Shewanella baltica OS155 # 16 reads uniquely mapped to Sinorhizobium (multi-hits among diff. species in Sinorhizobium allowed) 5 Sinorhizobium Sinorhizobium sp. RAC02 2 Sinorhizobium Sinorhizobium meliloti 1021 2 Sinorhizobium Sinorhizobium meliloti GR4 2 Sinorhizobium Sinorhizobium meliloti 2011 1 Sinorhizobium Sinorhizobium meliloti 1 Sinorhizobium Sinorhizobium meliloti SM11 1 Sinorhizobium Sinorhizobium meliloti BL225C 1 Sinorhizobium Sinorhizobium americanum CCGM7 1 Sinorhizobium Sinorhizobium fredii NGR234 # 11 reads uniquely mapped to Sphingobium (multi-hits among diff. species in Sphingobium allowed) 4 Sphingobium Sphingobium sp. RAC03 2 Sphingobium Sphingobium sp. SYK-6 1 Sphingobium Sphingobium sp. C100 1 Sphingobium Sphingobium baderi LL03 1 Sphingobium Sphingobium chlorophenolicum L-1 1 Sphingobium Sphingobium yanoikuyae ATCC 51230 1 Sphingobium Sphingobium sp. EP60837 # 31 reads uniquely mapped to Sphingomonas (multi-hits among diff. species in Sphingomonas allowed) 13 Sphingomonas Sphingomonas sp. Leaf33 3 Sphingomonas Sphingomonas sp. Leaf339 2 Sphingomonas Sphingomonas sp. JJ-A5 2 Sphingomonas Sphingomonas sp. ERG5 2 Sphingomonas Sphingomonas sp. MM-1 1 Sphingomonas Sphingomonas sp. NIC1 1 Sphingomonas Sphingomonas echinoides ATCC 14820 1 Sphingomonas Sphingomonas jaspsi DSM 18422 1 Sphingomonas Sphingomonas hengshuiensis 1 Sphingomonas Sphingomonas wittichii 1 Sphingomonas Sphingomonas sp. URHD0057 1 Sphingomonas Sphingomonas sp. Root241 1 Sphingomonas Sphingomonas sp. LK11 1 Sphingomonas Sphingomonas melonis TY # 26 reads uniquely mapped to Staphylococcus (multi-hits among diff. species in Staphylococcus allowed) 6 Staphylococcus Staphylococcus equorum 5 Staphylococcus Staphylococcus aureus 3 Staphylococcus Staphylococcus sp. AntiMn-1 2 Staphylococcus Staphylococcus aureus subsp. aureus 2 Staphylococcus Staphylococcus vitulinus F1028 1 Staphylococcus Staphylococcus lentus F1142 1 Staphylococcus Staphylococcus hominis subsp. hominis C80 1 Staphylococcus Staphylococcus pseudintermedius HKU10-03 1 Staphylococcus Staphylococcus aureus subsp. aureus NCTC 8325 1 Staphylococcus Staphylococcus epidermidis RP62A 1 Staphylococcus Staphylococcus aureus subsp. aureus str. Newman 1 Staphylococcus Staphylococcus simulans 1 Staphylococcus Staphylococcus sciuri subsp. sciuri # 32 reads uniquely mapped to Stenotrophomonas (multi-hits among diff. species in Stenotrophomonas allowed) 9 Stenotrophomonas Stenotrophomonas maltophilia 4 Stenotrophomonas Stenotrophomonas rhizophila 3 Stenotrophomonas Stenotrophomonas maltophilia D457 3 Stenotrophomonas Stenotrophomonas maltophilia K279a 3 Stenotrophomonas Stenotrophomonas ginsengisoli 3 Stenotrophomonas Stenotrophomonas daejeonensis 2 Stenotrophomonas Stenotrophomonas maltophilia R551-3 1 Stenotrophomonas Stenotrophomonas sp. KCTC 12332 1 Stenotrophomonas Stenotrophomonas koreensis 1 Stenotrophomonas Stenotrophomonas maltophilia JV3 1 Stenotrophomonas Stenotrophomonas sp. LM091 1 Stenotrophomonas Stenotrophomonas nitritireducens # 134 reads uniquely mapped to Streptococcus (multi-hits among diff. species in Streptococcus allowed) 26 Streptococcus Streptococcus oralis 15 Streptococcus Streptococcus oralis Uo5 8 Streptococcus Streptococcus infantis ATCC 700779 7 Streptococcus Streptococcus oralis subsp. tigurinus AZ_3a 6 Streptococcus Streptococcus sanguinis SK36 6 Streptococcus Streptococcus pneumoniae 5 Streptococcus Streptococcus sp. oral taxon 431 4 Streptococcus Streptococcus gordonii 4 Streptococcus Streptococcus mitis 3 Streptococcus Streptococcus pneumoniae JJA 2 Streptococcus Streptococcus pseudopneumoniae IS7493 2 Streptococcus Streptococcus pneumoniae P1031 2 Streptococcus Streptococcus mitis B6 2 Streptococcus Streptococcus parasanguinis ATCC 15912 2 Streptococcus Streptococcus pneumoniae R6 2 Streptococcus Streptococcus pneumoniae SPN033038 2 Streptococcus Streptococcus pneumoniae TIGR4 2 Streptococcus Streptococcus sp. X13SY08 2 Streptococcus Streptococcus gordonii str. Challis substr. CH1 2 Streptococcus Streptococcus pneumoniae TCH8431/19A 2 Streptococcus Streptococcus pneumoniae SPN034183 2 Streptococcus Streptococcus pneumoniae SPN994038 2 Streptococcus Streptococcus pneumoniae D39 2 Streptococcus Streptococcus pneumoniae SPN032672 2 Streptococcus Streptococcus pneumoniae ATCC 700669 2 Streptococcus Streptococcus sp. I-G2 1 Streptococcus Streptococcus pneumoniae Hungary19A-6 1 Streptococcus Streptococcus henryi DSM 19005 1 Streptococcus Streptococcus pneumoniae AP200 1 Streptococcus Streptococcus himalayensis 1 Streptococcus Streptococcus pneumoniae 670-6B 1 Streptococcus Streptococcus pneumoniae CGSP14 1 Streptococcus Streptococcus iniae 1 Streptococcus Streptococcus pseudoporcinus LQ 940-04 1 Streptococcus Streptococcus sp. I-P16 1 Streptococcus Streptococcus pneumoniae gamPNI0373 1 Streptococcus Streptococcus pneumoniae INV200 1 Streptococcus Streptococcus pneumoniae SPNA45 1 Streptococcus Streptococcus pneumoniae INV104 1 Streptococcus Streptococcus pneumoniae OXC141 1 Streptococcus Streptococcus pyogenes 1 Streptococcus Streptococcus thermophilus 1 Streptococcus Streptococcus pyogenes MGAS315 1 Streptococcus Streptococcus gallolyticus # 19 reads uniquely mapped to Streptomyces (multi-hits among diff. species in Streptomyces allowed) 5 Streptomyces Streptomyces avicenniae 2 Streptomyces Streptomyces qinglanensis 2 Streptomyces Streptomyces sp. 3211 2 Streptomyces Streptomyces scabrisporus DSM 41855 1 Streptomyces Streptomyces sp. fd1-xmd 1 Streptomyces Streptomyces yerevanensis 1 Streptomyces Streptomyces yeochonensis CN732 1 Streptomyces Streptomyces xiamenensis 1 Streptomyces Streptomyces griseoplanus 1 Streptomyces Streptomyces vitaminophilus DSM 41686 1 Streptomyces Streptomyces olivaceus 1 Streptomyces Streptomyces puniciscabiei # 24 reads uniquely mapped to Synechococcus (multi-hits among diff. species in Synechococcus allowed) 3 Synechococcus Synechococcus sp. UTEX 2973 3 Synechococcus Synechococcus sp. PCC 7502 2 Synechococcus Synechococcus sp. WH 8109 2 Synechococcus Synechococcus elongatus PCC 6301 2 Synechococcus Synechococcus elongatus PCC 7942 2 Synechococcus Synechococcus sp. PCC 7335 2 Synechococcus Synechococcus sp. PCC 7336 2 Synechococcus Synechococcus sp. PCC 7117 1 Synechococcus Synechococcus sp. PCC 8807 1 Synechococcus Synechococcus sp. RCC307 1 Synechococcus Synechococcus sp. JA-2-3B'a(2-13) 1 Synechococcus Synechococcus sp. RS9917 1 Synechococcus Synechococcus sp. CC9311 1 Synechococcus Synechococcus sp. JA-3-3Ab # 6 reads uniquely mapped to Tannerella (multi-hits among diff. species in Tannerella allowed) 2 Tannerella Tannerella forsythia 92A2 2 Tannerella Tannerella forsythia KS16 2 Tannerella Tannerella sp. oral taxon HOT-286 # 33 reads uniquely mapped to Tepidimonas (multi-hits among diff. species in Tepidimonas allowed) 33 Tepidimonas Tepidimonas taiwanensis # 23 reads uniquely mapped to Tepidiphilus (multi-hits among diff. species in Tepidiphilus allowed) 15 Tepidiphilus Tepidiphilus margaritifer DSM 15129 8 Tepidiphilus Tepidiphilus thermophilus # 4432 reads uniquely mapped to Thauera (multi-hits among diff. species in Thauera allowed) 2255 Thauera Thauera terpenica 58Eu 2154 Thauera Thauera aminoaromatica S2 9 Thauera Thauera sp. MZ1T 6 Thauera Thauera sp. 28 5 Thauera Thauera chlorobenzoica 3 Thauera Thauera humireducens # 46 reads uniquely mapped to Thermus (multi-hits among diff. species in Thermus allowed) 24 Thermus Thermus scotoductus SA-01 5 Thermus Thermus antranikianii DSM 12462 3 Thermus Thermus parvatiensis 2 Thermus Thermus sp. CCB_US3_UF1 2 Thermus Thermus amyloliquefaciens 2 Thermus Thermus aquaticus Y51MC23 2 Thermus Thermus filiformis 2 Thermus Thermus thermophilus HB8 1 Thermus Thermus islandicus DSM 21543 1 Thermus Thermus thermophilus SG0.5JP17-16 1 Thermus Thermus brockianus 1 Thermus Thermus oshimai JL-2 # 27 reads uniquely mapped to Thiocystis (multi-hits among diff. species in Thiocystis allowed) 27 Thiocystis Thiocystis violascens DSM 198 # 19 reads uniquely mapped to Treponema (multi-hits among diff. species in Treponema allowed) 10 Treponema Treponema caldarium DSM 7334 2 Treponema Treponema vincentii F0403 1 Treponema Treponema denticola ATCC 35405 1 Treponema Treponema brennaborense DSM 12168 1 Treponema Treponema maltophilum ATCC 51939 1 Treponema Treponema pallidum subsp. pallidum str. Sea 81-4 1 Treponema Treponema succinifaciens DSM 2489 1 Treponema Treponema saccharophilum DSM 2985 1 Treponema Treponema socranskii subsp. paredis ATCC 35535 # 22 reads uniquely mapped to Trueperella (multi-hits among diff. species in Trueperella allowed) 22 Trueperella Trueperella pyogenes # 346 reads uniquely mapped to Veillonella (multi-hits among diff. species in Veillonella allowed) 222 Veillonella Veillonella parvula 120 Veillonella Veillonella parvula DSM 2008 3 Veillonella Veillonella sp. oral taxon 780 str. F0422 1 Veillonella Veillonella seminalis ACS-216-V-Col6b # 37 reads uniquely mapped to Vogesella (multi-hits among diff. species in Vogesella allowed) 37 Vogesella Vogesella sp. EB # 16 reads uniquely mapped to Williamsia (multi-hits among diff. species in Williamsia allowed) 9 Williamsia Williamsia herbipolensis 7 Williamsia Williamsia muralis NBRC 105860 # 31 reads uniquely mapped to Xanthomonas (multi-hits among diff. species in Xanthomonas allowed) 5 Xanthomonas Xanthomonas sp. Mitacek01 4 Xanthomonas Xanthomonas citri subsp. citri 4 Xanthomonas Xanthomonas oryzae pv. oryzae 3 Xanthomonas Xanthomonas translucens pv. translucens DSM 18974 2 Xanthomonas Xanthomonas euvesicatoria 2 Xanthomonas Xanthomonas oryzae pv. oryzicola BLS256 1 Xanthomonas Xanthomonas campestris pv. vesicatoria str. 85-10 1 Xanthomonas Xanthomonas perforans 1 Xanthomonas Xanthomonas campestris pv. raphani 756C 1 Xanthomonas Xanthomonas oryzae pv. oryzae MAFF 311018 1 Xanthomonas Xanthomonas campestris pv. campestris 1 Xanthomonas Xanthomonas fragariae 1 Xanthomonas Xanthomonas sacchari 1 Xanthomonas NC_006834 1 Xanthomonas Xanthomonas citri subsp. malvacearum 1 Xanthomonas Xanthomonas campestris pv. campestris str. ATCC 33913 1 Xanthomonas Xanthomonas albilineans GPE PC73 # 31 reads uniquely mapped to Xenophilus (multi-hits among diff. species in Xenophilus allowed) 31 Xenophilus Xenophilus azovorans DSM 13620