# 2018/01/24 08:12:57
# HUMAN	Target (Host) organism
# DNA	Sequencing source
# A427_2	Replication ID
# A427	Sample ID
# DRR016841_1	Read1
# DRR016841_2	Read2
R1	 220315860 (100.0000%)	[A] Total raw reads
R1	 210251025 (95.4316%)	[B] Total reads after QC of (A)
R1		
R1	 210251025 (100.0000%)	[B-2] Total reads of (B) passed to HISAT2
R1	 384374692 (91.4085%)	[B-3] Total mapped reads of (B-2)x2
R1	  36127358 (8.5915%)	[B-4] Total unmapped reads of (B-2)x2
R1	 193361524 (91.9670%)	[F] Total mapped reads of (B-2)
R1	  16889501 (8.0330%)	[G] Total unmapped reads of (B-2)
R1	   3744833 (1.7811%)	[H] Total unmapped reads of (B-2) after running BLASTn with (G)
R1	 206506192 (98.2189%)	[J] Total mapped reads to host genome ( (B-2)-H)
R1	       999 (0.0005%)	[I-1] Total mapped reads of (H) to exo. genomes
R1	         4.838	[I-3] RPMH of (I-1)
R1	         4.752	[I-4] PPM of (I-1)
R1	        13 (0.0000%)	[I-5] Total chimeric reads of (I-1)
R1	         0.063	[I-7] RPMH of (I-5)
R1	         0.062	[I-8] PPM of (I-5)
R1		
## -----------------------------------------

R2	 220315860 (100.0000%)	[A] Total raw reads
R2	 210251025 (95.4316%)	[B] Total reads after QC of (A)
R2		
R2	 210251025 (100.0000%)	[B-2] Total reads of (B) passed to HISAT2
R2	 384374692 (91.4085%)	[B-3] Total mapped reads of (B-2)x2
R2	  36127358 (8.5915%)	[B-4] Total unmapped reads of (B-2)x2
R2	 191013168 (90.8501%)	[F] Total mapped reads of (B-2)
R2	  19237857 (9.1499%)	[G] Total unmapped reads of (B-2)
R2	   5121821 (2.4361%)	[H] Total unmapped reads of (B-2) after running BLASTn with (G)
R2	 205129204 (97.5639%)	[J] Total mapped reads to host genome ( (B-2)-H)
R2	       953 (0.0005%)	[I-1] Total mapped reads of (H) to exo. genomes
R2	         4.646	[I-3] RPMH of (I-1)
R2	         4.533	[I-4] PPM of (I-1)
R2	        18 (0.0000%)	[I-5] Total chimeric reads of (I-1)
R2	         0.088	[I-7] RPMH of (I-5)
R2	         0.086	[I-8] PPM of (I-5)
R2		
## -----------------------------------------

##=============================================##
# List threshold of RPMH   > 1
# List threshold of P-value < 0.001
# RPMH	PPM	Total	Multi_Reads(All_ExoGenus)	Uniq_Reads(This_Genus)	wTotal	Sum_ReadLength	Type	Exo	Genus	Pvalue(Uniq)
1.4332	1.4077	326	44	282	295.974	32614	ALL_R1	bacteria	Curvibacter	0.0
<<
1.3419	1.3093	302	41	261	275.273	30172	ALL_R2	bacteria	Curvibacter	0.0