# 2020/07/11 10:46:34 # HUMAN Target (Host) organism # RNA Sequencing source # ERR204836 Replication ID # ERR204836 Sample ID # ERR204836_1 Read1 # ERR204836_2 Read2 R1 11227947 (100.0000%) [A] Total raw reads R1 10858788 (96.7121%) [B] Total reads after QC of (A) R1 R1 10858788 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R1 19444901 (89.5353%) [B-3] Total mapped reads of (B-2)x2 R1 2272675 (10.4647%) [B-4] Total unmapped reads of (B-2)x2 R1 9711224 (89.4319%) [F] Total mapped reads of (B-2) R1 1147564 (10.5681%) [G] Total unmapped reads of (B-2) R1 116932 (1.0768%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R1 10741856 (98.9232%) [J] Total mapped reads to host genome ( (B-2)-H) R1 88833 (0.8181%) [I-1] Total mapped reads of (H) to exo. genomes R1 8269.800 [I-3] RPMH of (I-1) R1 8180.747 [I-4] PPM of (I-1) R1 759697.944 [I-5] RPMU of (I-1) R1 194 (0.0018%) [I-6] Total chimeric reads of (I-1) R1 18.060 [I-7] RPMH of (I-6) R1 17.866 [I-8] PPM of (I-6) R1 1659.084 [I-9] RPMU of (I-6) R1 ## ----------------------------------------- R2 11227947 (100.0000%) [A] Total raw reads R2 10858788 (96.7121%) [B] Total reads after QC of (A) R2 R2 10858788 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R2 19444901 (89.5353%) [B-3] Total mapped reads of (B-2)x2 R2 2272675 (10.4647%) [B-4] Total unmapped reads of (B-2)x2 R2 9733677 (89.6387%) [F] Total mapped reads of (B-2) R2 1125111 (10.3613%) [G] Total unmapped reads of (B-2) R2 126098 (1.1613%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R2 10732690 (98.8387%) [J] Total mapped reads to host genome ( (B-2)-H) R2 89107 (0.8206%) [I-1] Total mapped reads of (H) to exo. genomes R2 8302.392 [I-3] RPMH of (I-1) R2 8205.980 [I-4] PPM of (I-1) R2 706648.797 [I-5] RPMU of (I-1) R2 146 (0.0013%) [I-6] Total chimeric reads of (I-1) R2 13.603 [I-7] RPMH of (I-6) R2 13.445 [I-8] PPM of (I-6) R2 1157.830 [I-9] RPMU of (I-6) R2 ## ----------------------------------------- ##=============================================## # List threshold of RPMU > 1 # List threshold of P-value < 0.001 # RPMH PPM RPMU Total Multi_Reads(All_ExoGenus) Uniq_Reads(This_Genus) wTotal Sum_ReadLength Type Exo Genus Pvalue(Uniq) 621.2408 614.5510 57069.7414 10419 6274 4145 6673.279 774054 ALL_R1 bacteria Nocardia 0.0 << 5541.2212 5481.5510 509039.4417 59523 0 59523 59523.000 4377430 ALL_R1 viral Lymphocryptovirus 0.0 1622.3453 1604.8752 149035.3368 17427 0 17427 17427.000 1293985 ALL_R1 viral Betaretrovirus 0.0 << 795.7983 786.5570 67733.4771 10411 2990 7421 8541.056 760950 ALL_R2 bacteria Nocardia 0.0 << 5571.2035 5506.5077 474186.7436 59794 0 59794 59794.000 4338986 ALL_R2 viral Lymphocryptovirus 0.0 1628.0168 1609.1114 138566.8290 17473 0 17473 17473.000 1289510 ALL_R2 viral Betaretrovirus 0.0 << 0.7466 0.7386 68.5869 11 5 6 8.020 822 R1U bacteria Nocardia n/a 0.6248 0.6180 57.3923 36 35 1 6.711 2578 R1U bacteria Pseudomonas n/a 0.1307 0.1293 12.0070 2 1 1 1.404 150 R1U bacteria Catellicoccus n/a << 0.0931 0.0921 8.5520 1 0 1 1.000 37 R1U fungi Pestalotiopsis n/a << 10.3334 10.2221 949.2697 111 0 111 111.000 8185 R1U viral Lymphocryptovirus n/a 2.4204 2.3944 222.3515 26 0 26 26.000 1928 R1U viral Betaretrovirus n/a << 0.0932 0.0921 7.9303 1 0 1 1.000 53 R2U bacteria Enterobacter n/a << 0.0932 0.0921 7.9303 2 1 1 1.000 96 R2U fungi Debaryomyces n/a 0.0932 0.0921 7.9303 2 1 1 1.000 124 R2U fungi Lodderomyces n/a 0.0932 0.0921 7.9303 2 1 1 1.000 114 R2U fungi Trichoderma n/a 0.0932 0.0921 7.9303 1 0 1 1.000 50 R2U fungi Batrachochytrium n/a 0.0932 0.0921 7.9303 1 0 1 1.000 37 R2U fungi Schizosaccharomyces n/a << 8.9446 8.8408 761.3126 96 0 96 96.000 6720 R2U viral Lymphocryptovirus n/a 2.1430 2.1181 182.3978 23 0 23 23.000 1671 R2U viral Betaretrovirus n/a