# 2020/05/06 04:08:35 # HUMAN Target (Host) organism # RNA Sequencing source # ERR188207 Replication ID # ERR188207 Sample ID # ERR188207_1 Read1 # ERR188207_2 Read2 R1 32185915 (100.0000%) [A] Total raw reads R1 31438688 (97.6784%) [B] Total reads after QC of (A) R1 R1 31438688 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R1 58288569 (92.7020%) [B-3] Total mapped reads of (B-2)x2 R1 4588807 (7.2980%) [B-4] Total unmapped reads of (B-2)x2 R1 29218260 (92.9373%) [F] Total mapped reads of (B-2) R1 2220428 (7.0627%) [G] Total unmapped reads of (B-2) R1 214718 (0.6830%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R1 31223970 (99.3170%) [J] Total mapped reads to host genome ( (B-2)-H) R1 129367 (0.4115%) [I-1] Total mapped reads of (H) to exo. genomes R1 4143.195 [I-3] RPMH of (I-1) R1 4114.898 [I-4] PPM of (I-1) R1 602497.229 [I-5] RPMU of (I-1) R1 136 (0.0004%) [I-6] Total chimeric reads of (I-1) R1 4.356 [I-7] RPMH of (I-6) R1 4.326 [I-8] PPM of (I-6) R1 633.389 [I-9] RPMU of (I-6) R1 ## ----------------------------------------- R2 32185915 (100.0000%) [A] Total raw reads R2 31438688 (97.6784%) [B] Total reads after QC of (A) R2 R2 31438688 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R2 58288569 (92.7020%) [B-3] Total mapped reads of (B-2)x2 R2 4588807 (7.2980%) [B-4] Total unmapped reads of (B-2)x2 R2 29070309 (92.4667%) [F] Total mapped reads of (B-2) R2 2368379 (7.5333%) [G] Total unmapped reads of (B-2) R2 276778 (0.8804%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R2 31161910 (99.1196%) [J] Total mapped reads to host genome ( (B-2)-H) R2 127851 (0.4067%) [I-1] Total mapped reads of (H) to exo. genomes R2 4102.797 [I-3] RPMH of (I-1) R2 4066.677 [I-4] PPM of (I-1) R2 461926.165 [I-5] RPMU of (I-1) R2 155 (0.0005%) [I-6] Total chimeric reads of (I-1) R2 4.974 [I-7] RPMH of (I-6) R2 4.930 [I-8] PPM of (I-6) R2 560.016 [I-9] RPMU of (I-6) R2 ## ----------------------------------------- ##=============================================## # List threshold of RPMU > 1 # List threshold of P-value < 0.001 # RPMH PPM RPMU Total Multi_Reads(All_ExoGenus) Uniq_Reads(This_Genus) wTotal Sum_ReadLength Type Exo Genus Pvalue(Uniq) 657.6861 653.1943 95639.7275 73943 73860 83 20535.571 5488012 ALL_R1 bacteria Acinetobacter 9.89e-08 14.7555 14.6547 2145.7260 498 70 428 460.726 36518 ALL_R1 bacteria Escherichia 0.0 << 1724.7967 1713.0168 250817.3511 53855 0 53855 53855.000 4026298 ALL_R1 viral Lymphocryptovirus 0.0 << 694.6237 688.5084 78206.3603 72641 72561 80 21645.800 5260091 ALL_R2 bacteria Acinetobacter 5.52e-07 14.0560 13.9322 1582.5355 490 104 386 438.011 34125 ALL_R2 bacteria Escherichia 0.0 << 1722.4233 1707.2595 193924.3726 53674 0 53674 53674.000 3988671 ALL_R2 viral Lymphocryptovirus 0.0 688.8250 682.7608 77553.5014 72294 72292 2 21465.103 5235264 ALL_R2 viral Phix174microvirus n/a << 0.5124 0.5089 74.5163 16 0 16 16.000 1211 R1U bacteria Lachnoclostridium n/a << 0.0320 0.0318 4.6573 1 0 1 1.000 41 R1U fungi Microsporum n/a 0.0320 0.0318 4.6573 1 0 1 1.000 38 R1U fungi Phycomyces n/a << 2.6902 2.6719 391.2108 84 0 84 84.000 6211 R1U viral Lymphocryptovirus n/a << 0.4814 0.4771 54.1951 15 0 15 15.000 1069 R2U bacteria Lachnoclostridium n/a 0.0642 0.0636 7.2260 2 0 2 2.000 93 R2U bacteria Flammeovirga n/a 0.0327 0.0324 3.6853 2 1 1 1.020 147 R2U bacteria Delftia n/a 0.0321 0.0318 3.6130 1 0 1 1.000 76 R2U bacteria Staphylococcus n/a 0.0321 0.0318 3.6130 1 0 1 1.000 57 R2U bacteria Intestinimonas n/a 0.0321 0.0318 3.6130 1 0 1 1.000 43 R2U bacteria Mycobacterium n/a 0.0321 0.0318 3.6130 1 0 1 1.000 42 R2U bacteria Muricauda n/a 0.0321 0.0318 3.6130 1 0 1 1.000 40 R2U bacteria Paenibacillus n/a 0.0321 0.0318 3.6130 1 0 1 1.000 37 R2U bacteria Clostridium n/a 0.0321 0.0318 3.6130 1 0 1 1.000 36 R2U bacteria Stigmatella n/a 0.0321 0.0318 3.6130 1 0 1 1.000 36 R2U bacteria Gordonibacter n/a << 0.1636 0.1621 18.4155 6 2 4 5.097 336 R2U fungi Microsporum n/a 0.1315 0.1303 14.8025 5 2 3 4.097 274 R2U fungi Aspergillus n/a 0.0963 0.0954 10.8390 3 0 3 3.000 182 R2U fungi Kalmanozyma n/a 0.0818 0.0810 9.2059 3 1 2 2.548 142 R2U fungi Rasamsonia n/a 0.0642 0.0636 7.2260 2 0 2 2.000 122 R2U fungi Leptosphaeria n/a 0.0642 0.0636 7.2260 2 0 2 2.000 119 R2U fungi Fusarium n/a 0.0559 0.0554 6.2902 2 1 1 1.741 89 R2U fungi Coniosporium n/a 0.0559 0.0554 6.2902 2 1 1 1.741 85 R2U fungi Pseudogymnoascus n/a 0.0559 0.0554 6.2902 2 1 1 1.741 138 R2U fungi Gaeumannomyces n/a 0.0536 0.0532 6.0373 3 2 1 1.671 184 R2U fungi Diplodia n/a 0.0497 0.0492 5.5929 2 1 1 1.548 99 R2U fungi Baudoinia n/a 0.0360 0.0357 4.0538 2 1 1 1.122 88 R2U fungi Neofusicoccum n/a 0.0360 0.0357 4.0538 2 1 1 1.122 124 R2U fungi Clavispora n/a 0.0321 0.0318 3.6130 1 0 1 1.000 73 R2U fungi Cordyceps n/a 0.0321 0.0318 3.6130 1 0 1 1.000 71 R2U fungi Moesziomyces n/a 0.0321 0.0318 3.6130 1 0 1 1.000 59 R2U fungi Xylona n/a 0.0321 0.0318 3.6130 1 0 1 1.000 52 R2U fungi Pneumocystis n/a 0.0321 0.0318 3.6130 1 0 1 1.000 50 R2U fungi Kwoniella n/a 0.0321 0.0318 3.6130 1 0 1 1.000 48 R2U fungi Endocarpon n/a 0.0321 0.0318 3.6130 1 0 1 1.000 45 R2U fungi Colletotrichum n/a 0.0321 0.0318 3.6130 1 0 1 1.000 40 R2U fungi Setosphaeria n/a 0.0321 0.0318 3.6130 1 0 1 1.000 39 R2U fungi Fonsecaea n/a 0.0321 0.0318 3.6130 1 0 1 1.000 39 R2U fungi Cutaneotrichosporon n/a << 2.3426 2.3220 263.7493 73 0 73 73.000 5363 R2U viral Lymphocryptovirus n/a