# 2020/04/21 14:08:35 # HUMAN Target (Host) organism # RNA Sequencing source # ERR188112 Replication ID # ERR188112 Sample ID # ERR188112_1 Read1 # ERR188112_2 Read2 R1 39302691 (100.0000%) [A] Total raw reads R1 38086978 (96.9068%) [B] Total reads after QC of (A) R1 R1 38086978 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R1 69400704 (91.1082%) [B-3] Total mapped reads of (B-2)x2 R1 6773252 (8.8918%) [B-4] Total unmapped reads of (B-2)x2 R1 34882245 (91.5858%) [F] Total mapped reads of (B-2) R1 3204733 (8.4142%) [G] Total unmapped reads of (B-2) R1 124792 (0.3277%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R1 37962186 (99.6723%) [J] Total mapped reads to host genome ( (B-2)-H) R1 78376 (0.2058%) [I-1] Total mapped reads of (H) to exo. genomes R1 2064.581 [I-3] RPMH of (I-1) R1 2057.816 [I-4] PPM of (I-1) R1 628053.080 [I-5] RPMU of (I-1) R1 171 (0.0004%) [I-6] Total chimeric reads of (I-1) R1 4.505 [I-7] RPMH of (I-6) R1 4.490 [I-8] PPM of (I-6) R1 1370.280 [I-9] RPMU of (I-6) R1 ## ----------------------------------------- R2 39302691 (100.0000%) [A] Total raw reads R2 38086978 (96.9068%) [B] Total reads after QC of (A) R2 R2 38086978 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R2 69400704 (91.1082%) [B-3] Total mapped reads of (B-2)x2 R2 6773252 (8.8918%) [B-4] Total unmapped reads of (B-2)x2 R2 34518459 (90.6306%) [F] Total mapped reads of (B-2) R2 3568519 (9.3694%) [G] Total unmapped reads of (B-2) R2 239804 (0.6296%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R2 37847174 (99.3704%) [J] Total mapped reads to host genome ( (B-2)-H) R2 77656 (0.2039%) [I-1] Total mapped reads of (H) to exo. genomes R2 2051.831 [I-3] RPMH of (I-1) R2 2038.912 [I-4] PPM of (I-1) R2 323831.129 [I-5] RPMU of (I-1) R2 249 (0.0007%) [I-6] Total chimeric reads of (I-1) R2 6.579 [I-7] RPMH of (I-6) R2 6.538 [I-8] PPM of (I-6) R2 1038.348 [I-9] RPMU of (I-6) R2 ## ----------------------------------------- ##=============================================## # List threshold of RPMU > 1 # List threshold of P-value < 0.001 # RPMH PPM RPMU Total Multi_Reads(All_ExoGenus) Uniq_Reads(This_Genus) wTotal Sum_ReadLength Type Exo Genus Pvalue(Uniq) 91.1848 90.8860 27738.7493 4188 1381 2807 3461.574 311948 ALL_R1 bacteria Nocardia 0.0 1.4706 1.4658 447.3764 83 32 51 55.829 5995 ALL_R1 bacteria Escherichia 2.97e-12 << 1532.4723 1527.4512 466183.7297 58176 0 58176 58176.000 4280903 ALL_R1 viral Lymphocryptovirus 0.0 << 91.7825 91.2046 14485.6174 4161 1836 2325 3473.709 306361 ALL_R2 bacteria Nocardia 0.0 1.4572 1.4480 229.9837 82 35 47 55.151 5828 ALL_R2 bacteria Escherichia 2.72e-09 << 1527.8552 1518.2354 241134.4264 57825 0 57825 57825.000 4225132 ALL_R2 viral Lymphocryptovirus 0.0 << 0.0790 0.0788 24.0400 3 0 3 3.000 219 R1U bacteria Nocardia n/a 0.0263 0.0263 8.0133 1 0 1 1.000 75 R1U bacteria Planococcus n/a 0.0263 0.0263 8.0133 1 0 1 1.000 75 R1U bacteria Methylobacterium n/a 0.0263 0.0263 8.0133 1 0 1 1.000 66 R1U bacteria Desulfocurvus n/a 0.0263 0.0263 8.0133 1 0 1 1.000 52 R1U bacteria Lachnoclostridium n/a 0.0263 0.0263 8.0133 1 0 1 1.000 39 R1U bacteria Streptomyces n/a << 0.0263 0.0263 8.0133 1 0 1 1.000 65 R1U fungi Babjeviella n/a 0.0263 0.0263 8.0133 1 0 1 1.000 58 R1U fungi Schizosaccharomyces n/a 0.0263 0.0263 8.0133 1 0 1 1.000 48 R1U fungi Yarrowia n/a 0.0263 0.0263 8.0133 1 0 1 1.000 39 R1U fungi Alternaria n/a << 3.8986 3.8858 1185.9735 148 0 148 148.000 10787 R1U viral Lymphocryptovirus n/a 0.0263 0.0263 8.0133 1 0 1 1.000 45 R1U viral Betabaculovirus n/a << 0.1489 0.1480 23.5025 6 1 5 5.636 366 R2U bacteria Nocardia n/a 0.0528 0.0525 8.3401 2 0 2 2.000 74 R2U bacteria Clostridium n/a 0.0439 0.0436 6.9307 3 2 1 1.662 217 R2U bacteria Catellicoccus n/a 0.0439 0.0436 6.9307 3 2 1 1.662 149 R2U bacteria Fusobacterium n/a 0.0282 0.0280 4.4453 2 1 1 1.066 87 R2U bacteria Sphingomonas n/a 0.0264 0.0263 4.1701 1 0 1 1.000 75 R2U bacteria Pseudomonas n/a 0.0264 0.0263 4.1701 1 0 1 1.000 75 R2U bacteria Anoxybacillus n/a 0.0264 0.0263 4.1701 1 0 1 1.000 46 R2U bacteria Bacillus n/a 0.0264 0.0263 4.1701 1 0 1 1.000 44 R2U bacteria Legionella n/a 0.0264 0.0263 4.1701 1 0 1 1.000 39 R2U bacteria Rhodonellum n/a 0.0264 0.0263 4.1701 1 0 1 1.000 39 R2U bacteria Chelativorans n/a 0.0264 0.0263 4.1701 1 0 1 1.000 36 R2U bacteria Flavobacterium n/a << 0.1653 0.1643 26.0963 11 7 4 6.258 579 R2U fungi Aspergillus n/a 0.1514 0.1505 23.8987 10 7 3 5.731 506 R2U fungi Leptosphaeria n/a 0.1489 0.1480 23.5025 6 1 5 5.636 291 R2U fungi Schizosaccharomyces n/a 0.0903 0.0897 14.2450 5 2 3 3.416 217 R2U fungi Exophiala n/a 0.0769 0.0764 12.1307 4 3 1 2.909 187 R2U fungi Metschnikowia n/a 0.0697 0.0693 11.0007 4 2 2 2.638 175 R2U fungi Paracoccidioides n/a 0.0697 0.0693 11.0007 4 2 2 2.638 174 R2U fungi Cryptococcus n/a 0.0636 0.0632 10.0374 4 2 2 2.407 185 R2U fungi Histoplasma n/a 0.0635 0.0631 10.0290 3 1 2 2.405 141 R2U fungi Coniosporium n/a 0.0528 0.0525 8.3401 2 0 2 2.000 141 R2U fungi Aureobasidium n/a 0.0528 0.0525 8.3401 2 0 2 2.000 108 R2U fungi Dichomitus n/a 0.0479 0.0475 7.5520 4 3 1 1.811 234 R2U fungi Punctularia n/a 0.0374 0.0372 5.9048 3 2 1 1.416 148 R2U fungi Botrytis n/a 0.0371 0.0369 5.8590 2 1 1 1.405 97 R2U fungi Encephalitozoon n/a 0.0308 0.0306 4.8540 2 1 1 1.164 130 R2U fungi Scedosporium n/a 0.0308 0.0306 4.8540 2 1 1 1.164 113 R2U fungi Gaeumannomyces n/a 0.0268 0.0266 4.2243 3 2 1 1.013 159 R2U fungi Pestalotiopsis n/a 0.0267 0.0265 4.2159 2 1 1 1.011 123 R2U fungi Trametes n/a 0.0267 0.0265 4.2159 2 1 1 1.011 105 R2U fungi Laccaria n/a 0.0265 0.0263 4.1784 2 1 1 1.002 85 R2U fungi Microsporum n/a 0.0264 0.0263 4.1701 1 0 1 1.000 75 R2U fungi Enterocytozoon n/a 0.0264 0.0263 4.1701 1 0 1 1.000 75 R2U fungi Agaricus n/a 0.0264 0.0263 4.1701 1 0 1 1.000 70 R2U fungi Coprinopsis n/a 0.0264 0.0263 4.1701 1 0 1 1.000 68 R2U fungi Kwoniella n/a 0.0264 0.0263 4.1701 1 0 1 1.000 66 R2U fungi Postia n/a 0.0264 0.0263 4.1701 1 0 1 1.000 63 R2U fungi Purpureocillium n/a 0.0264 0.0263 4.1701 1 0 1 1.000 54 R2U fungi Nematocida n/a 0.0264 0.0263 4.1701 1 0 1 1.000 49 R2U fungi Vavraia n/a 0.0264 0.0263 4.1701 1 0 1 1.000 47 R2U fungi Pseudogymnoascus n/a 0.0264 0.0263 4.1701 1 0 1 1.000 45 R2U fungi Ascoidea n/a 0.0264 0.0263 4.1701 1 0 1 1.000 43 R2U fungi Pochonia n/a 0.0264 0.0263 4.1701 1 0 1 1.000 37 R2U fungi Hyphopichia n/a << 3.8312 3.8071 604.6605 145 0 145 145.000 10389 R2U viral Lymphocryptovirus n/a