#Unique_Reads Genus Species # 11 reads uniquely mapped to Acidovorax (multi-hits among diff. species in Acidovorax allowed) 4 Acidovorax Acidovorax sp. JS42 2 Acidovorax Acidovorax ebreus TPSY 1 Acidovorax Acidovorax caeni 1 Acidovorax Acidovorax sp. Leaf160 1 Acidovorax Acidovorax sp. KKS102 1 Acidovorax Acidovorax sp. RAC01 1 Acidovorax Acidovorax avenae subsp. avenae ATCC 19860 # 13899 reads uniquely mapped to Acinetobacter (multi-hits among diff. species in Acinetobacter allowed) 13889 Acinetobacter Acinetobacter rudis 4 Acinetobacter Acinetobacter baumannii 2 Acinetobacter Acinetobacter sp. TTH0-4 1 Acinetobacter Acinetobacter indicus CIP 110367 1 Acinetobacter Acinetobacter bohemicus ANC 3994 1 Acinetobacter Acinetobacter pittii 1 Acinetobacter Acinetobacter lwoffii NCTC 5866 = CIP 64.10 = NIPH 512 # 21 reads uniquely mapped to Afipia (multi-hits among diff. species in Afipia allowed) 9 Afipia Afipia clevelandensis ATCC 49720 3 Afipia Afipia broomeae ATCC 49717 3 Afipia Afipia sp. Root123D2 3 Afipia Afipia birgiae 34632 2 Afipia Afipia sp. P52-10 1 Afipia Afipia felis ATCC 53690 # 13 reads uniquely mapped to Agrobacterium (multi-hits among diff. species in Agrobacterium allowed) 3 Agrobacterium Agrobacterium sp. RAC06 3 Agrobacterium Agrobacterium radiobacter K84 2 Agrobacterium Agrobacterium vitis S4 2 Agrobacterium Agrobacterium tumefaciens 1 Agrobacterium Agrobacterium arsenijevicii 1 Agrobacterium Agrobacterium rhizogenes 1 Agrobacterium Agrobacterium sp. H13-3 # 6 reads uniquely mapped to Alcaligenes (multi-hits among diff. species in Alcaligenes allowed) 6 Alcaligenes Alcaligenes faecalis # 15 reads uniquely mapped to Aliihoeflea (multi-hits among diff. species in Aliihoeflea allowed) 15 Aliihoeflea Aliihoeflea sp. 2WW # 12 reads uniquely mapped to Arthrobacter (multi-hits among diff. species in Arthrobacter allowed) 2 Arthrobacter Arthrobacter sp. Rue61a 2 Arthrobacter Arthrobacter sp. ATCC 21022 2 Arthrobacter Arthrobacter globiformis NBRC 12137 1 Arthrobacter Arthrobacter crystallopoietes BAB-32 1 Arthrobacter Arthrobacter sp. YC-RL1 1 Arthrobacter Arthrobacter sp. L77 1 Arthrobacter Arthrobacter sp. A3 1 Arthrobacter Arthrobacter sp. PAMC 25486 1 Arthrobacter Arthrobacter sp. IHBB 11108 # 2 reads uniquely mapped to Asinibacterium (multi-hits among diff. species in Asinibacterium allowed) 2 Asinibacterium Asinibacterium sp. OR53 # 23 reads uniquely mapped to Bacillus (multi-hits among diff. species in Bacillus allowed) 5 Bacillus Bacillus badius 5 Bacillus Bacillus weihenstephanensis 2 Bacillus Bacillus bogoriensis ATCC BAA-922 1 Bacillus Bacillus sp. 1 Bacillus Bacillus bataviensis LMG 21833 1 Bacillus Bacillus coagulans DSM 1 = ATCC 7050 1 Bacillus Bacillus subtilis subsp. subtilis 1 Bacillus Bacillus megaterium MSP20.1 1 Bacillus Bacillus anthracis 1 Bacillus Bacillus akibai JCM 9157 1 Bacillus Bacillus clausii KSM-K16 1 Bacillus Bacillus azotoformans LMG 9581 1 Bacillus Bacillus thuringiensis serovar kurstaki str. YBT-1520 1 Bacillus NZ_CP014858 # 32 reads uniquely mapped to Bradyrhizobium (multi-hits among diff. species in Bradyrhizobium allowed) 9 Bradyrhizobium Bradyrhizobium elkanii USDA 76 5 Bradyrhizobium Bradyrhizobium japonicum 4 Bradyrhizobium Bradyrhizobium sp. AS23.2 3 Bradyrhizobium Bradyrhizobium elkanii WSM2783 2 Bradyrhizobium Bradyrhizobium sp. CCGE-LA001 1 Bradyrhizobium Bradyrhizobium neotropicale 1 Bradyrhizobium Bradyrhizobium sp. Tv2a-2 1 Bradyrhizobium Bradyrhizobium japonicum USDA 6 1 Bradyrhizobium Bradyrhizobium lablabi 1 Bradyrhizobium Bradyrhizobium sp. ARR65 1 Bradyrhizobium Bradyrhizobium sp. URHD0069 1 Bradyrhizobium Bradyrhizobium sp. ORS 278 1 Bradyrhizobium Bradyrhizobium diazoefficiens 1 Bradyrhizobium Bradyrhizobium sp. STM 3843 # 54 reads uniquely mapped to Campylobacter (multi-hits among diff. species in Campylobacter allowed) 51 Campylobacter Campylobacter mucosalis 1 Campylobacter Campylobacter concisus 1 Campylobacter Campylobacter coli 1 Campylobacter Campylobacter cuniculorum DSM 23162 = LMG 24588 # 9 reads uniquely mapped to Citricoccus (multi-hits among diff. species in Citricoccus allowed) 9 Citricoccus Citricoccus sp. CH26A # 13 reads uniquely mapped to Corynebacterium (multi-hits among diff. species in Corynebacterium allowed) 3 Corynebacterium Corynebacterium variabile 2 Corynebacterium Corynebacterium pseudotuberculosis 2 Corynebacterium Corynebacterium xerosis NBRC 16721 1 Corynebacterium Corynebacterium halotolerans 1 Corynebacterium Corynebacterium halotolerans YIM 70093 = DSM 44683 1 Corynebacterium Corynebacterium amycolatum SK46 1 Corynebacterium Corynebacterium riegelii 1 Corynebacterium Corynebacterium pseudotuberculosis 1/06-A 1 Corynebacterium Corynebacterium freneyi DNF00450 # 9 reads uniquely mapped to Cronobacter (multi-hits among diff. species in Cronobacter allowed) 2 Cronobacter Cronobacter turicensis z3032 2 Cronobacter Cronobacter sakazakii SP291 2 Cronobacter Cronobacter condimenti 1330 1 Cronobacter Cronobacter dublinensis subsp. dublinensis LMG 23823 1 Cronobacter Cronobacter sakazakii ATCC BAA-894 1 Cronobacter Cronobacter sakazakii # 21 reads uniquely mapped to Cupriavidus (multi-hits among diff. species in Cupriavidus allowed) 8 Cupriavidus Cupriavidus basilensis 5 Cupriavidus Cupriavidus metallidurans CH34 3 Cupriavidus Cupriavidus gilardii CR3 2 Cupriavidus Cupriavidus sp. USMAHM13 1 Cupriavidus Ralstonia eutropha JMP134 1 Cupriavidus Cupriavidus necator 1 Cupriavidus Ralstonia eutropha H16 # 61 reads uniquely mapped to Cutibacterium (multi-hits among diff. species in Cutibacterium allowed) 20 Cutibacterium Cutibacterium acnes 9 Cutibacterium Propionibacterium acnes subsp. defendens ATCC 11828 6 Cutibacterium Propionibacterium acnes hdn-1 3 Cutibacterium Propionibacterium acnes HL096PA1 3 Cutibacterium Propionibacterium acnes 6609 3 Cutibacterium Cutibacterium granulosum DSM 20700 3 Cutibacterium Propionibacterium acnes TypeIA2 P.acn33 2 Cutibacterium Propionibacterium acnes C1 2 Cutibacterium Propionibacterium acnes SK137 2 Cutibacterium [Propionibacterium] humerusii P08 2 Cutibacterium Cutibacterium avidum 2 Cutibacterium Propionibacterium acnes 266 2 Cutibacterium Propionibacterium acnes KPA171202 1 Cutibacterium Propionibacterium acnes TypeIA2 P.acn31 1 Cutibacterium Cutibacterium avidum 44067 # 16 reads uniquely mapped to Delftia (multi-hits among diff. species in Delftia allowed) 7 Delftia Delftia tsuruhatensis 4 Delftia Delftia sp. HK171 3 Delftia Delftia sp. Cs1-4 2 Delftia Delftia acidovorans SPH-1 # 101 reads uniquely mapped to Escherichia (multi-hits among diff. species in Escherichia allowed) 57 Escherichia Escherichia coli 8 Escherichia Escherichia coli K-12 3 Escherichia Escherichia coli W 3 Escherichia Escherichia coli O157:H7 2 Escherichia Escherichia coli O55:H7 str. CB9615 2 Escherichia Escherichia coli UMNK88 2 Escherichia Escherichia coli BW2952 1 Escherichia Escherichia coli ACN001 1 Escherichia Escherichia coli O157:H7 str. TW14359 1 Escherichia Escherichia coli str. K-12 substr. MG1655 1 Escherichia Escherichia coli str. 'clone D i2' 1 Escherichia Escherichia coli KLY 1 Escherichia Escherichia coli DH1 1 Escherichia Escherichia coli str. K-12 substr. MC4100 1 Escherichia Escherichia coli O145:H28 str. RM13516 1 Escherichia Escherichia coli O157:H7 str. Sakai 1 Escherichia Escherichia coli ATCC 8739 1 Escherichia Escherichia coli ATCC 25922 1 Escherichia Escherichia coli B 1 Escherichia Escherichia coli 1303 1 Escherichia Escherichia coli O139:H28 str. E24377A 1 Escherichia NZ_CP014670 1 Escherichia Escherichia coli O104:H4 str. 2009EL-2050 1 Escherichia Escherichia coli ER2796 1 Escherichia Escherichia coli BL21(DE3) 1 Escherichia Escherichia coli PCN033 1 Escherichia Escherichia coli 'BL21-Gold(DE3)pLysS AG' 1 Escherichia Escherichia coli O157:H7 str. SS52 1 Escherichia Escherichia coli O104:H4 str. 2011C-3493 1 Escherichia Escherichia coli O145:H28 str. RM12761 1 Escherichia Escherichia coli PCN061 # 6 reads uniquely mapped to Geobacillus (multi-hits among diff. species in Geobacillus allowed) 1 Geobacillus Geobacillus sp. Y4.1MC1 1 Geobacillus Geobacillus genomosp. 3 1 Geobacillus Geobacillus thermodenitrificans NG80-2 1 Geobacillus Geobacillus sp. Y412MC61 1 Geobacillus Geobacillus icigianus 1 Geobacillus Geobacillus kaustophilus HTA426 # 7 reads uniquely mapped to Haemophilus (multi-hits among diff. species in Haemophilus allowed) 3 Haemophilus Haemophilus parainfluenzae T3T1 2 Haemophilus Haemophilus influenzae 1 Haemophilus [Haemophilus] ducreyi 1 Haemophilus Haemophilus sputorum CCUG 13788 # 1 reads uniquely mapped to Ktedonobacter (multi-hits among diff. species in Ktedonobacter allowed) 1 Ktedonobacter Ktedonobacter racemifer DSM 44963 # 3 reads uniquely mapped to Lachnoclostridium (multi-hits among diff. species in Lachnoclostridium allowed) 2 Lachnoclostridium [Clostridium] citroniae WAL-17108 1 Lachnoclostridium [Clostridium] bolteae 90A9 # 14 reads uniquely mapped to Lactobacillus (multi-hits among diff. species in Lactobacillus allowed) 2 Lactobacillus Lactobacillus sakei subsp. sakei 23K 2 Lactobacillus Lactobacillus backii 1 Lactobacillus Lactobacillus kefiranofaciens ZW3 1 Lactobacillus Lactobacillus gastricus DSM 16045 1 Lactobacillus Lactobacillus delbrueckii subsp. lactis 1 Lactobacillus Lactobacillus fermentum CECT 5716 1 Lactobacillus Lactobacillus herbarum 1 Lactobacillus Lactobacillus rhamnosus ATCC 8530 1 Lactobacillus Lactobacillus salivarius CECT 5713 1 Lactobacillus Lactobacillus gasseri ATCC 33323 = JCM 1131 1 Lactobacillus Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 1 Lactobacillus Lactobacillus curvatus # 3 reads uniquely mapped to Meiothermus (multi-hits among diff. species in Meiothermus allowed) 1 Meiothermus Meiothermus chliarophilus DSM 9957 1 Meiothermus Meiothermus silvanus DSM 9946 1 Meiothermus Meiothermus ruber DSM 1279 # 13957 reads uniquely mapped to Mesorhizobium (multi-hits among diff. species in Mesorhizobium allowed) 7151 Mesorhizobium Mesorhizobium plurifarium 6791 Mesorhizobium Mesorhizobium sp. ORS3324 3 Mesorhizobium Mesorhizobium sp. LC103 2 Mesorhizobium Mesorhizobium sp. Root157 2 Mesorhizobium Mesorhizobium loti NZP2037 2 Mesorhizobium Mesorhizobium sp. B7 1 Mesorhizobium Mesorhizobium ciceri biovar biserrulae 1 Mesorhizobium Mesorhizobium sp. AA22 1 Mesorhizobium Mesorhizobium loti MAFF303099 1 Mesorhizobium Mesorhizobium ciceri biovar biserrulae WSM1271 1 Mesorhizobium Mesorhizobium ciceri 1 Mesorhizobium Mesorhizobium sp. Root1471 # 64 reads uniquely mapped to Methylobacterium (multi-hits among diff. species in Methylobacterium allowed) 33 Methylobacterium Methylobacterium phyllosphaerae 6 Methylobacterium Methylobacterium aquaticum 5 Methylobacterium Methylobacterium extorquens 4 Methylobacterium Methylobacterium sp. C1 4 Methylobacterium Methylobacterium sp. Leaf456 2 Methylobacterium Methylobacterium sp. ZNC0032 2 Methylobacterium Methylobacterium radiotolerans JCM 2831 1 Methylobacterium Methylobacterium populi BJ001 1 Methylobacterium Methylobacterium sp. Leaf89 1 Methylobacterium Methylobacterium extorquens DM4 1 Methylobacterium Methylobacterium populi 1 Methylobacterium Methylobacterium sp. 77 1 Methylobacterium Methylobacterium sp. ARG-1 1 Methylobacterium Methylobacterium extorquens PA1 1 Methylobacterium Methylobacterium nodulans ORS 2060 # 13 reads uniquely mapped to Micrococcus (multi-hits among diff. species in Micrococcus allowed) 13 Micrococcus Micrococcus luteus NCTC 2665 # 14005 reads uniquely mapped to Mycobacterium (multi-hits among diff. species in Mycobacterium allowed) 7184 Mycobacterium Mycobacterium aurum 6810 Mycobacterium Mycobacterium cosmeticum 2 Mycobacterium Mycobacterium colombiense CECT 3035 2 Mycobacterium Mycobacterium bovis BCG str. Tokyo 172 1 Mycobacterium Mycobacterium hassiacum DSM 44199 1 Mycobacterium Mycobacterium smegmatis str. MC2 155 1 Mycobacterium Mycobacterium kansasii 824 1 Mycobacterium Mycobacterium neoaurum VKM Ac-1815D 1 Mycobacterium Mycobacterium sp. GA-0227b 1 Mycobacterium Mycobacterium phlei 1 Mycobacterium Mycobacterium mucogenicum # 2000 reads uniquely mapped to Nocardia (multi-hits among diff. species in Nocardia allowed) 754 Nocardia Nocardia brevicatena NBRC 12119 494 Nocardia Nocardia pneumoniae NBRC 100136 251 Nocardia Nocardia veterana NBRC 100344 209 Nocardia Nocardia jiangxiensis NBRC 101359 202 Nocardia Nocardia niigatensis NBRC 100131 82 Nocardia Nocardia otitidiscaviarum NBRC 14405 2 Nocardia Nocardia farcinica 1 Nocardia Nocardia seriolae 1 Nocardia Nocardia rhamnosiphila NBRC 108938 1 Nocardia Nocardia higoensis NBRC 100133 1 Nocardia Nocardia nova SH22a 1 Nocardia Nocardia arizonensis 1 Nocardia Nocardia sp. CNY236 # 4 reads uniquely mapped to Peptoniphilus (multi-hits among diff. species in Peptoniphilus allowed) 1 Peptoniphilus Peptoniphilus sp. BV3C26 1 Peptoniphilus Peptoniphilus indolicus ATCC 29427 1 Peptoniphilus Peptoniphilus rhinitidis 1-13 1 Peptoniphilus Peptoniphilus grossensis ph5 # 2 reads uniquely mapped to Peptostreptococcus (multi-hits among diff. species in Peptostreptococcus allowed) 1 Peptostreptococcus Peptostreptococcus stomatis DSM 17678 1 Peptostreptococcus Peptostreptococcus anaerobius VPI 4330 = DSM 2949 # 13702 reads uniquely mapped to Pseudomonas (multi-hits among diff. species in Pseudomonas allowed) 13678 Pseudomonas Pseudomonas pelagia CL-AP6 5 Pseudomonas Pseudomonas alcaliphila JAB1 3 Pseudomonas Pseudomonas aeruginosa 3 Pseudomonas Pseudomonas sp. LPH1 2 Pseudomonas Pseudomonas mendocina ymp 1 Pseudomonas Pseudomonas versuta 1 Pseudomonas Pseudomonas monteilii 1 Pseudomonas Pseudomonas sp. S-6-2 1 Pseudomonas Pseudomonas saudimassiliensis 1 Pseudomonas Pseudomonas mendocina NK-01 1 Pseudomonas Pseudomonas fulva 12-X 1 Pseudomonas NZ_CP008870 1 Pseudomonas [Pseudomonas syringae] pv. tomato str. DC3000 1 Pseudomonas Pseudomonas putida S12 1 Pseudomonas Pseudomonas putida KT2440 1 Pseudomonas Pseudomonas fluorescens # 14 reads uniquely mapped to Ralstonia (multi-hits among diff. species in Ralstonia allowed) 4 Ralstonia Ralstonia pickettii 12J 4 Ralstonia Ralstonia insidiosa 2 Ralstonia Ralstonia mannitolilytica 2 Ralstonia Ralstonia solanacearum FJAT-1458 2 Ralstonia Ralstonia solanacearum # 16 reads uniquely mapped to Rhizobium (multi-hits among diff. species in Rhizobium allowed) 2 Rhizobium Rhizobium leguminosarum bv. trifolii CB782 2 Rhizobium Rhizobium gallicum bv. gallicum R602 2 Rhizobium Rhizobium phaseoli 1 Rhizobium Rhizobium leguminosarum bv. viciae 3841 1 Rhizobium Rhizobium leucaenae USDA 9039 1 Rhizobium Rhizobium sp. S41 1 Rhizobium Rhizobium sp. N621 1 Rhizobium Rhizobium etli CFN 42 1 Rhizobium Rhizobium sp. LC145 1 Rhizobium Rhizobium etli CIAT 652 1 Rhizobium Rhizobium sp. Root651 1 Rhizobium Rhizobium sp. IRBG74 1 Rhizobium Rhizobium leguminosarum # 12 reads uniquely mapped to Rhodococcus (multi-hits among diff. species in Rhodococcus allowed) 3 Rhodococcus Rhodococcus fascians D188 1 Rhodococcus Rhodococcus defluvii 1 Rhodococcus Rhodococcus sp. 2G 1 Rhodococcus Rhodococcus sp. PBTS 1 1 Rhodococcus Rhodococcus aetherivorans 1 Rhodococcus Rhodococcus opacus PD630 1 Rhodococcus Rhodococcus erythropolis CCM2595 1 Rhodococcus Rhodococcus erythropolis R138 1 Rhodococcus Rhodococcus sp. YL-1 1 Rhodococcus Rhodococcus pyridinivorans SB3094 # 17 reads uniquely mapped to Ruegeria (multi-hits among diff. species in Ruegeria allowed) 6 Ruegeria Ruegeria pomeroyi DSS-3 5 Ruegeria Ruegeria mobilis F1926 2 Ruegeria Silicibacter lacuscaerulensis ITI-1157 2 Ruegeria Ruegeria conchae 1 Ruegeria Ruegeria halocynthiae 1 Ruegeria Ruegeria sp. TM1040 # 42 reads uniquely mapped to Sphingomonas (multi-hits among diff. species in Sphingomonas allowed) 9 Sphingomonas Sphingomonas sp. Leaf33 5 Sphingomonas Sphingomonas melonis TY 3 Sphingomonas Sphingomonas sp. Leaf339 3 Sphingomonas Sphingomonas wittichii 3 Sphingomonas Sphingomonas sp. ERG5 2 Sphingomonas Sphingomonas sp. NIC1 2 Sphingomonas Sphingomonas sp. Leaf17 1 Sphingomonas Sphingomonas taxi 1 Sphingomonas Sphingomonas sp. Leaf412 1 Sphingomonas Sphingomonas sp. LK11 1 Sphingomonas Sphingomonas sp. Mn802worker 1 Sphingomonas Sphingomonas paucimobilis NBRC 13935 1 Sphingomonas Sphingomonas wittichii RW1 1 Sphingomonas Sphingomonas sp. Leaf11 1 Sphingomonas Sphingomonas haloaromaticamans 1 Sphingomonas Sphingomonas sp. PR090111-T3T-6A 1 Sphingomonas Sphingomonas sp. Root241 1 Sphingomonas Sphingomonas elodea ATCC 31461 1 Sphingomonas Sphingomonas sp. SRS2 1 Sphingomonas Sphingomonas sp. WG 1 Sphingomonas Sphingomonas echinoides ATCC 14820 1 Sphingomonas Sphingomonas sp. URHD0057 # 29 reads uniquely mapped to Staphylococcus (multi-hits among diff. species in Staphylococcus allowed) 5 Staphylococcus Staphylococcus capitis subsp. capitis 5 Staphylococcus Staphylococcus epidermidis 5 Staphylococcus Staphylococcus epidermidis ATCC 12228 2 Staphylococcus Staphylococcus hominis subsp. hominis C80 2 Staphylococcus Staphylococcus epidermidis PM221 2 Staphylococcus Staphylococcus aureus 1 Staphylococcus Staphylococcus saprophyticus 1 Staphylococcus Staphylococcus epidermidis RP62A 1 Staphylococcus Staphylococcus capitis 1 Staphylococcus Staphylococcus carnosus subsp. carnosus TM300 1 Staphylococcus Staphylococcus hyicus 1 Staphylococcus Staphylococcus aureus subsp. aureus HO 5096 0412 1 Staphylococcus Staphylococcus warneri SG1 1 Staphylococcus Staphylococcus pseudintermedius ED99 # 10 reads uniquely mapped to Stenotrophomonas (multi-hits among diff. species in Stenotrophomonas allowed) 2 Stenotrophomonas Stenotrophomonas maltophilia JV3 2 Stenotrophomonas Stenotrophomonas acidaminiphila 2 Stenotrophomonas Stenotrophomonas panacihumi 1 Stenotrophomonas Stenotrophomonas koreensis 1 Stenotrophomonas Stenotrophomonas rhizophila 1 Stenotrophomonas Stenotrophomonas sp. LM091 1 Stenotrophomonas Stenotrophomonas sp. KCTC 12332 # 11 reads uniquely mapped to Streptococcus (multi-hits among diff. species in Streptococcus allowed) 1 Streptococcus Streptococcus thermophilus 1 Streptococcus Streptococcus pantholopis 1 Streptococcus Streptococcus mitis 1 Streptococcus Streptococcus plurextorum DSM 22810 1 Streptococcus Streptococcus anginosus 1 Streptococcus Streptococcus pyogenes 1 Streptococcus Streptococcus gordonii 1 Streptococcus Streptococcus pseudoporcinus LQ 940-04 1 Streptococcus Streptococcus oralis 1 Streptococcus Streptococcus iniae 1 Streptococcus Streptococcus mutans NN2025 # 9 reads uniquely mapped to Tepidimonas (multi-hits among diff. species in Tepidimonas allowed) 9 Tepidimonas Tepidimonas taiwanensis