# 2020/04/16 22:28:59 # HUMAN Target (Host) organism # DNA Sequencing source # ERR006305 Replication ID # SRP000547 Sample ID # ERR006305_1.filt Read1 # ERR006305_2.filt Read2 R1 9853507 (100.0000%) [A] Total raw reads R1 1444657 (14.6613%) [B] Total reads after QC of (A) R1 R1 1444657 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R1 2296406 (79.4793%) [B-3] Total mapped reads of (B-2)x2 R1 592908 (20.5207%) [B-4] Total unmapped reads of (B-2)x2 R1 1164995 (80.6416%) [F] Total mapped reads of (B-2) R1 279662 (19.3584%) [G] Total unmapped reads of (B-2) R1 56141 (3.8861%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R1 1388516 (96.1139%) [J] Total mapped reads to host genome ( (B-2)-H) R1 2073 (0.1435%) [I-1] Total mapped reads of (H) to exo. genomes R1 1492.961 [I-3] RPMH of (I-1) R1 1434.943 [I-4] PPM of (I-1) R1 36924.886 [I-5] RPMU of (I-1) R1 11 (0.0008%) [I-6] Total chimeric reads of (I-1) R1 7.922 [I-7] RPMH of (I-6) R1 7.614 [I-8] PPM of (I-6) R1 195.935 [I-9] RPMU of (I-6) R1 ## ----------------------------------------- R2 9853507 (100.0000%) [A] Total raw reads R2 1444657 (14.6613%) [B] Total reads after QC of (A) R2 R2 1444657 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R2 2296406 (79.4793%) [B-3] Total mapped reads of (B-2)x2 R2 592908 (20.5207%) [B-4] Total unmapped reads of (B-2)x2 R2 1131411 (78.3169%) [F] Total mapped reads of (B-2) R2 313246 (21.6831%) [G] Total unmapped reads of (B-2) R2 95834 (6.6337%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R2 1348823 (93.3663%) [J] Total mapped reads to host genome ( (B-2)-H) R2 1985 (0.1374%) [I-1] Total mapped reads of (H) to exo. genomes R2 1471.653 [I-3] RPMH of (I-1) R2 1374.029 [I-4] PPM of (I-1) R2 20712.899 [I-5] RPMU of (I-1) R2 76 (0.0053%) [I-6] Total chimeric reads of (I-1) R2 56.345 [I-7] RPMH of (I-6) R2 52.608 [I-8] PPM of (I-6) R2 793.038 [I-9] RPMU of (I-6) R2 ## ----------------------------------------- ##=============================================## # List threshold of RPMU > 1 # List threshold of P-value < 0.001 # RPMH PPM RPMU Total Multi_Reads(All_ExoGenus) Uniq_Reads(This_Genus) wTotal Sum_ReadLength Type Exo Genus Pvalue(Uniq) 24.0004 23.0678 593.5947 74 67 7 33.325 2664 ALL_R1 bacteria Eubacterium 9.48e-11 21.1449 20.3232 522.9690 67 62 5 29.360 2412 ALL_R1 bacteria Alcanivorax 4.89e-05 14.5191 13.9549 359.0958 31 11 20 20.160 1116 ALL_R1 bacteria Serratia 1.39e-38 2.9089 2.7958 71.9439 13 9 4 4.039 468 ALL_R1 bacteria Cutibacterium 2.05e-05 << 12.9635 12.4597 320.6213 18 0 18 18.000 648 ALL_R1 fungi Malassezia 3.27e-31 << 1360.2911 1307.4287 33643.6116 1890 2 1888 1888.786 68040 ALL_R1 viral Lymphocryptovirus 0.0 << 24.8513 23.2027 349.7715 67 54 13 33.520 2412 ALL_R2 bacteria Eubacterium 1.39e-38 16.8013 15.6868 236.4714 52 48 4 22.662 1872 ALL_R2 bacteria Alcanivorax 8.81e-04 14.0901 13.1554 198.3117 24 5 19 19.005 864 ALL_R2 bacteria Serratia 5.61e-38 8.0344 7.5014 113.0810 25 20 5 10.837 900 ALL_R2 bacteria Streptomyces 2.04e-05 5.9489 5.5543 83.7281 14 9 5 8.024 504 ALL_R2 bacteria Campylobacter 1.23e-04 2.9693 2.7723 41.7910 9 5 4 4.005 324 ALL_R2 bacteria Cutibacterium 8.35e-06 2.4481 2.2857 34.4554 5 2 3 3.302 180 ALL_R2 bacteria Staphylococcus 9.35e-04 << 8.8966 8.3065 125.2165 12 0 12 12.000 432 ALL_R2 fungi Malassezia 3.41e-15 << 1289.2722 1203.7459 18145.9607 1739 0 1739 1739.000 62604 ALL_R2 viral Lymphocryptovirus 0.0 << 0.7202 0.6922 17.8123 1 0 1 1.000 36 R1U bacteria Flavobacterium n/a 0.7202 0.6922 17.8123 1 0 1 1.000 36 R1U bacteria Bacillus n/a << 1.4404 1.3844 35.6246 2 0 2 2.000 72 R1U fungi Malassezia n/a << 2.1606 2.0766 53.4369 3 0 3 3.000 108 R1U viral Lymphocryptovirus n/a << 2.4710 2.3071 34.7789 7 6 1 3.333 252 R2U bacteria Eubacterium n/a 1.4828 1.3844 20.8694 2 0 2 2.000 72 R2U bacteria Streptomyces n/a 1.4828 1.3844 20.8694 2 0 2 2.000 72 R2U bacteria Pseudomonas n/a 1.4828 1.3844 20.8694 2 0 2 2.000 72 R2U bacteria Campylobacter n/a 1.4828 1.3844 20.8694 2 0 2 2.000 72 R2U bacteria Buchnera n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Weissella n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Sediminibacterium n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Sedimentitalea n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Sandaracinus n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Rickettsia n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Persicobacter n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Paenibacillus n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Mycoplasma n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Microbacterium n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Magnetospirillum n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Luteimonas n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Kosmotoga n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Kitasatospora n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Hydrogenivirga n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Herbaspirillum n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Helicobacter n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Helcococcus n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Geobacillus n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Francisella n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Flavobacterium n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Flammeovirga n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Facklamia n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Desulfobacca n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Deinococcus n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Cystobacter n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Crocinitomix n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Coprococcus n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Comamonas n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Candidatus_Arthromitus n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Bradyrhizobium n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Bordetella n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Bacteroides n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Bacillus n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Asticcacaulis n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Arsenicicoccus n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U bacteria Arcobacter n/a << 1.4828 1.3844 20.8694 2 0 2 2.000 72 R2U fungi Malassezia n/a 1.4828 1.3844 20.8694 2 0 2 2.000 72 R2U fungi Fomitiporia n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Schizophyllum n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Neurospora n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Nematocida n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Metarhizium n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Melampsora n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Kwoniella n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Eremothecium n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Debaryomyces n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Dactylellina n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Cryptococcus n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Capronia n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Beauveria n/a 0.7414 0.6922 10.4347 1 0 1 1.000 36 R2U fungi Aureobasidium n/a << 5.1897 4.8454 73.0430 7 0 7 7.000 252 R2U viral Lymphocryptovirus n/a