# 2020/03/27 20:27:33 # HUMAN Target (Host) organism # DNA Sequencing source # ERR006321 Replication ID # SRP000547 Sample ID # ERR006321_1.filt Read1 # ERR006321_2.filt Read2 R1 6737129 (100.0000%) [A] Total raw reads R1 131435 (1.9509%) [B] Total reads after QC of (A) R1 R1 131435 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R1 152193 (57.8967%) [B-3] Total mapped reads of (B-2)x2 R1 110677 (42.1033%) [B-4] Total unmapped reads of (B-2)x2 R1 70684 (53.7787%) [F] Total mapped reads of (B-2) R1 60751 (46.2213%) [G] Total unmapped reads of (B-2) R1 37953 (28.8759%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R1 93482 (71.1241%) [J] Total mapped reads to host genome ( (B-2)-H) R1 234 (0.1780%) [I-1] Total mapped reads of (H) to exo. genomes R1 2503.156 [I-3] RPMH of (I-1) R1 1780.348 [I-4] PPM of (I-1) R1 6165.521 [I-5] RPMU of (I-1) R1 46 (0.0350%) [I-6] Total chimeric reads of (I-1) R1 492.073 [I-7] RPMH of (I-6) R1 349.983 [I-8] PPM of (I-6) R1 1212.025 [I-9] RPMU of (I-6) R1 ## ----------------------------------------- R2 6737129 (100.0000%) [A] Total raw reads R2 131435 (1.9509%) [B] Total reads after QC of (A) R2 R2 131435 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R2 152193 (57.8967%) [B-3] Total mapped reads of (B-2)x2 R2 110677 (42.1033%) [B-4] Total unmapped reads of (B-2)x2 R2 81509 (62.0147%) [F] Total mapped reads of (B-2) R2 49926 (37.9853%) [G] Total unmapped reads of (B-2) R2 24020 (18.2752%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R2 107415 (81.7248%) [J] Total mapped reads to host genome ( (B-2)-H) R2 157 (0.1195%) [I-1] Total mapped reads of (H) to exo. genomes R2 1461.621 [I-3] RPMH of (I-1) R2 1194.507 [I-4] PPM of (I-1) R2 6536.220 [I-5] RPMU of (I-1) R2 7 (0.0053%) [I-6] Total chimeric reads of (I-1) R2 65.168 [I-7] RPMH of (I-6) R2 53.258 [I-8] PPM of (I-6) R2 291.424 [I-9] RPMU of (I-6) R2 ## ----------------------------------------- ##=============================================## # List threshold of RPMU > 1 # List threshold of P-value < 0.001 # RPMH PPM RPMU Total Multi_Reads(All_ExoGenus) Uniq_Reads(This_Genus) wTotal Sum_ReadLength Type Exo Genus Pvalue(Uniq) 127.2544 90.5086 313.4403 22 17 5 11.896 792 ALL_R1 bacteria Alcanivorax 0.0 124.9331 88.8576 307.7227 20 14 6 11.679 720 ALL_R1 bacteria Eubacterium 0.0 53.4862 38.0416 131.7419 5 0 5 5.000 180 ALL_R1 bacteria Clostridium 3.87e-63 42.7890 30.4333 105.3935 4 0 4 4.000 144 ALL_R1 bacteria Paenibacillus 1.42e-229 34.4130 24.4760 84.7627 5 3 2 3.217 180 ALL_R1 bacteria Tetrasphaera 3.10e-30 32.1024 22.8326 79.0715 4 1 3 3.001 144 ALL_R1 bacteria Streptomyces 3.96e-128 32.0917 22.8250 79.0451 3 0 3 3.000 108 ALL_R1 bacteria Streptococcus 4.05e-77 21.4052 15.2243 52.7231 3 1 2 2.001 108 ALL_R1 bacteria Mycoplasma 1.72e-17 21.4052 15.2243 52.7231 3 1 2 2.001 108 ALL_R1 bacteria Bacillus 6.24e-53 21.3945 15.2166 52.6968 2 0 2 2.000 72 ALL_R1 bacteria Prevotella 2.25e-56 21.3945 15.2166 52.6968 2 0 2 2.000 72 ALL_R1 bacteria Chryseobacterium 1.18e-65 21.3945 15.2166 52.6968 2 0 2 2.000 72 ALL_R1 bacteria Buchnera 1.59e-87 21.3945 15.2166 52.6968 2 0 2 2.000 72 ALL_R1 bacteria Arcobacter 4.57e-23 10.7079 7.6159 26.3747 2 1 1 1.001 72 ALL_R1 bacteria Pseudomonas 9.68e-17 10.7079 7.6159 26.3747 2 1 1 1.001 72 ALL_R1 bacteria Providencia 5.97e-08 10.7079 7.6159 26.3747 2 1 1 1.001 72 ALL_R1 bacteria Hymenobacter 7.45e-08 10.7079 7.6159 26.3747 2 1 1 1.001 72 ALL_R1 bacteria Cutibacterium 2.20e-22 10.7079 7.6159 26.3747 2 1 1 1.001 72 ALL_R1 bacteria Citrobacter 1.51e-08 10.7079 7.6159 26.3747 2 1 1 1.001 72 ALL_R1 bacteria Acinetobacter 4.52e-40 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Xenococcus 3.17e-14 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Thermus 1.51e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Thauera 4.52e-40 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Synechococcus 9.68e-17 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Staphylococcus 2.20e-22 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Spirosoma 4.52e-40 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Sphingobacterium 3.17e-14 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Shewanella 3.17e-14 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Rhodanobacter 2.20e-22 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Rhizobacter 8.27e-05 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Peptoniphilus 4.74e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Pedobacter 4.74e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Muricauda 4.52e-40 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Micromonospora 7.45e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Leptotrichia 2.20e-22 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Leifsonia 4.52e-40 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Lachnoclostridium 7.45e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Kocuria 9.68e-17 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Hoeflea 9.68e-17 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Fusobacterium 1.51e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Flammeovirga 4.04e-13 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Deferribacter 7.45e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Cyanothece 2.20e-22 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Cellulophaga 4.74e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Candidatus_Solibacter 8.27e-05 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Brevibacillus 6.62e-06 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Blattabacterium 9.68e-17 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Arenibacter 3.17e-14 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Anaerococcus 9.68e-17 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Anabaena 4.52e-40 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Amycolatopsis 5.97e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 bacteria Actinomyces 2.20e-22 << 42.7890 30.4333 105.3935 4 0 4 4.000 144 ALL_R1 fungi Malassezia 2.46e-123 32.0917 22.8250 79.0451 3 0 3 3.000 108 ALL_R1 fungi Tuber 1.99e-148 32.0917 22.8250 79.0451 3 0 3 3.000 108 ALL_R1 fungi Tetrapisispora 1.06e-68 21.3945 15.2166 52.6968 2 0 2 2.000 72 ALL_R1 fungi Phialocephala 1.23e-34 21.3945 15.2166 52.6968 2 0 2 2.000 72 ALL_R1 fungi Marssonina 2.20e-22 21.3945 15.2166 52.6968 2 0 2 2.000 72 ALL_R1 fungi Fusarium 2.17e-21 21.3945 15.2166 52.6968 2 0 2 2.000 72 ALL_R1 fungi Aspergillus 9.65e-54 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Tsuchiyaea 4.52e-40 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Trichosporon 1.96e-09 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Trichoderma 3.17e-14 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Setosphaeria 1.51e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Phycomyces 4.52e-40 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Pestalotiopsis 4.74e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Penicillium 4.04e-13 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Paracoccidioides 3.04e-05 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Neurospora 2.20e-22 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Histoplasma 3.16e-04 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Fonsecaea 4.04e-13 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Cryptococcus 7.45e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Coniosporium 4.74e-08 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Clavispora 2.20e-22 10.6972 7.6083 26.3484 1 0 1 1.000 36 ALL_R1 fungi Cladophialophora 4.74e-08 << 1059.0274 753.2240 2608.4894 99 0 99 99.000 3564 ALL_R1 viral Lymphocryptovirus 0.0 << 292.0821 238.7035 1306.1615 38 11 27 31.374 1368 ALL_R2 bacteria Alcanivorax 0.0 50.0303 40.8871 223.7302 12 11 1 5.374 432 ALL_R2 bacteria Tetrasphaera 7.83e-17 9.3097 7.6083 41.6320 1 0 1 1.000 36 ALL_R2 bacteria Rhizobacter 1.14e-09 9.3097 7.6083 41.6320 1 0 1 1.000 36 ALL_R2 bacteria Hungatella 3.29e-31 9.3097 7.6083 41.6320 1 0 1 1.000 36 ALL_R2 bacteria Granulicella n/a 9.3097 7.6083 41.6320 1 0 1 1.000 36 ALL_R2 bacteria Cutibacterium 8.77e-49 9.3097 7.6083 41.6320 1 0 1 1.000 36 ALL_R2 bacteria Chroococcidiopsis 8.94e-88 << 27.9291 22.8250 124.8959 3 0 3 3.000 108 ALL_R2 fungi Malassezia 1.06e-154 9.3097 7.6083 41.6320 1 0 1 1.000 36 ALL_R2 fungi Nannizzia 2.48e-12 9.3097 7.6083 41.6320 1 0 1 1.000 36 ALL_R2 fungi Fusarium 3.91e-12 << 958.8977 783.6573 4288.0933 103 0 103 103.000 3708 ALL_R2 viral Lymphocryptovirus 0.0 << 38.7454 27.5573 95.4338 6 4 2 3.622 216 R1U bacteria Eubacterium n/a 28.0482 19.9490 69.0854 5 4 1 2.622 180 R1U bacteria Alcanivorax n/a 21.3945 15.2166 52.6968 2 0 2 2.000 72 R1U bacteria Streptomyces n/a 21.3945 15.2166 52.6968 2 0 2 2.000 72 R1U bacteria Streptococcus n/a 21.3945 15.2166 52.6968 2 0 2 2.000 72 R1U bacteria Paenibacillus n/a 21.3945 15.2166 52.6968 2 0 2 2.000 72 R1U bacteria Clostridium n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Xenococcus n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Thermus n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Thauera n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Sphingobacterium n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Providencia n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Peptoniphilus n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Mycoplasma n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Lachnoclostridium n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Flammeovirga n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Fermentimonas n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Cyanothece n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Citrobacter n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Chryseobacterium n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Buchnera n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Bacillus n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Anaerococcus n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U bacteria Actinomyces n/a << 21.3945 15.2166 52.6968 2 0 2 2.000 72 R1U fungi Tetrapisispora n/a 21.3945 15.2166 52.6968 2 0 2 2.000 72 R1U fungi Aspergillus n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U fungi Tuber n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U fungi Tsuchiyaea n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U fungi Trichosporon n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U fungi Phialocephala n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U fungi Penicillium n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U fungi Marssonina n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U fungi Fonsecaea n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U fungi Cryptococcus n/a 10.6972 7.6083 26.3484 1 0 1 1.000 36 R1U fungi Coniosporium n/a << 9.3097 7.6083 41.6320 1 0 1 1.000 36 R2U bacteria Chroococcidiopsis n/a << 9.3097 7.6083 41.6320 1 0 1 1.000 36 R2U fungi Fusarium n/a << 9.3097 7.6083 41.6320 1 0 1 1.000 36 R2U viral Lymphocryptovirus n/a