# 2020/03/25 17:22:55 # HUMAN Target (Host) organism # DNA Sequencing source # ERR007480 Replication ID # SRP000547 Sample ID # ERR007480_1.filt Read1 # ERR007480_2.filt Read2 R1 22617984 (100.0000%) [A] Total raw reads R1 15258984 (67.4639%) [B] Total reads after QC of (A) R1 R1 15258984 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R1 24783574 (81.2098%) [B-3] Total mapped reads of (B-2)x2 R1 5734394 (18.7902%) [B-4] Total unmapped reads of (B-2)x2 R1 12640562 (82.8401%) [F] Total mapped reads of (B-2) R1 2618422 (17.1599%) [G] Total unmapped reads of (B-2) R1 470855 (3.0858%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R1 14788129 (96.9142%) [J] Total mapped reads to host genome ( (B-2)-H) R1 12643 (0.0829%) [I-1] Total mapped reads of (H) to exo. genomes R1 854.943 [I-3] RPMH of (I-1) R1 828.561 [I-4] PPM of (I-1) R1 26851.154 [I-5] RPMU of (I-1) R1 69 (0.0005%) [I-6] Total chimeric reads of (I-1) R1 4.666 [I-7] RPMH of (I-6) R1 4.522 [I-8] PPM of (I-6) R1 146.542 [I-9] RPMU of (I-6) R1 ## ----------------------------------------- R2 22617984 (100.0000%) [A] Total raw reads R2 15258984 (67.4639%) [B] Total reads after QC of (A) R2 R2 15258984 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R2 24783574 (81.2098%) [B-3] Total mapped reads of (B-2)x2 R2 5734394 (18.7902%) [B-4] Total unmapped reads of (B-2)x2 R2 12143012 (79.5794%) [F] Total mapped reads of (B-2) R2 3115972 (20.4206%) [G] Total unmapped reads of (B-2) R2 802379 (5.2584%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R2 14456605 (94.7416%) [J] Total mapped reads to host genome ( (B-2)-H) R2 12847 (0.0842%) [I-1] Total mapped reads of (H) to exo. genomes R2 888.659 [I-3] RPMH of (I-1) R2 841.930 [I-4] PPM of (I-1) R2 16011.137 [I-5] RPMU of (I-1) R2 290 (0.0019%) [I-6] Total chimeric reads of (I-1) R2 20.060 [I-7] RPMH of (I-6) R2 19.005 [I-8] PPM of (I-6) R2 361.425 [I-9] RPMU of (I-6) R2 ## ----------------------------------------- ##=============================================## # List threshold of RPMU > 1 # List threshold of P-value < 0.001 # RPMH PPM RPMU Total Multi_Reads(All_ExoGenus) Uniq_Reads(This_Genus) wTotal Sum_ReadLength Type Exo Genus Pvalue(Uniq) 32.2442 31.2492 1012.6918 766 499 267 476.831 35459 ALL_R1 bacteria Alcanivorax 0.0 17.1962 16.6655 540.0792 412 170 242 254.299 18028 ALL_R1 bacteria Serratia 0.0 13.5737 13.1549 426.3096 405 355 50 200.730 18519 ALL_R1 bacteria Tetrasphaera 3.60e-210 5.4397 5.2718 170.8445 161 140 21 80.443 7371 ALL_R1 bacteria Eubacterium 2.18e-06 << 1.2172 1.1796 38.2283 18 0 18 18.000 837 ALL_R1 fungi Malassezia 1.32e-12 << 733.1454 710.5223 23025.8763 10843 2 10841 10841.849 486766 ALL_R1 viral Lymphocryptovirus 0.0 << 32.0045 30.3215 576.6302 809 593 216 462.676 36961 ALL_R2 bacteria Alcanivorax 0.0 17.8110 16.8745 320.9045 337 90 247 257.487 15120 ALL_R2 bacteria Serratia 0.0 17.6737 16.7443 318.4293 497 415 82 255.501 22804 ALL_R2 bacteria Tetrasphaera 0.0 6.2657 5.9362 112.8905 194 177 17 90.581 8663 ALL_R2 bacteria Eubacterium 3.72e-04 1.7184 1.6280 30.9604 37 13 24 24.842 1509 ALL_R2 bacteria Clostridium 3.67e-09 1.1070 1.0488 19.9444 54 38 16 16.003 2320 ALL_R2 bacteria Bacillus 9.07e-06 << 2.4210 2.2937 43.6203 35 0 35 35.000 1473 ALL_R2 fungi Malassezia 1.02e-57 << 733.7131 695.1315 13219.4387 10607 0 10607 10607.000 472325 ALL_R2 viral Lymphocryptovirus 0.0 << 2.0721 2.0082 65.0795 41 18 23 30.643 1916 R1U bacteria Alcanivorax n/a 0.1352 0.1311 4.2476 2 0 2 2.000 79 R1U bacteria Clostridium n/a 0.1352 0.1311 4.2476 2 0 2 2.000 74 R1U bacteria Bacteroides n/a 0.0798 0.0773 2.5061 2 1 1 1.180 83 R1U bacteria Pseudomonas n/a 0.0676 0.0655 2.1238 1 0 1 1.000 39 R1U bacteria Thermotoga n/a 0.0676 0.0655 2.1238 1 0 1 1.000 39 R1U bacteria Catonella n/a 0.0676 0.0655 2.1238 1 0 1 1.000 38 R1U bacteria Microbacterium n/a 0.0676 0.0655 2.1238 1 0 1 1.000 37 R1U bacteria Brachyspira n/a 0.0676 0.0655 2.1238 1 0 1 1.000 36 R1U bacteria Rhodovulum n/a 0.0676 0.0655 2.1238 1 0 1 1.000 36 R1U bacteria Myxococcus n/a 0.0676 0.0655 2.1238 1 0 1 1.000 36 R1U bacteria Fusobacterium n/a << 0.0676 0.0655 2.1238 1 0 1 1.000 47 R1U fungi Malassezia n/a 0.0676 0.0655 2.1238 1 0 1 1.000 46 R1U fungi Puccinia n/a 0.0676 0.0655 2.1238 1 0 1 1.000 39 R1U fungi Nosema n/a 0.0676 0.0655 2.1238 1 0 1 1.000 38 R1U fungi Phycomyces n/a 0.0676 0.0655 2.1238 1 0 1 1.000 37 R1U fungi Serpula n/a 0.0676 0.0655 2.1238 1 0 1 1.000 37 R1U fungi Rhinocladiella n/a 0.0676 0.0655 2.1238 1 0 1 1.000 37 R1U fungi Cordyceps n/a 0.0676 0.0655 2.1238 1 0 1 1.000 36 R1U fungi Trichoderma n/a 0.0676 0.0655 2.1238 1 0 1 1.000 36 R1U fungi Cyphellophora n/a << 0.3381 0.3277 10.6190 5 0 5 5.000 198 R1U viral Lymphocryptovirus n/a << 2.1302 2.0182 38.3809 50 33 17 30.796 2227 R2U bacteria Alcanivorax n/a 0.9367 0.8875 16.8773 31 30 1 13.542 1385 R2U bacteria Tetrasphaera n/a 0.5534 0.5243 9.9704 8 0 8 8.000 302 R2U bacteria Bacillus n/a 0.5131 0.4861 9.2450 8 1 7 7.418 311 R2U bacteria Clostridium n/a 0.5131 0.4861 9.2450 8 1 7 7.418 306 R2U bacteria Mycoplasma n/a 0.2767 0.2621 4.9852 4 0 4 4.000 162 R2U bacteria Fusobacterium n/a 0.2767 0.2621 4.9852 4 0 4 4.000 154 R2U bacteria Helicobacter n/a 0.2767 0.2621 4.9852 4 0 4 4.000 152 R2U bacteria Acinetobacter n/a 0.2767 0.2621 4.9852 4 0 4 4.000 151 R2U bacteria Buchnera n/a 0.2075 0.1966 3.7389 3 0 3 3.000 122 R2U bacteria Brachyspira n/a 0.2075 0.1966 3.7389 3 0 3 3.000 121 R2U bacteria Wigglesworthia n/a 0.2075 0.1966 3.7389 3 0 3 3.000 114 R2U bacteria Pseudoalteromonas n/a 0.2075 0.1966 3.7389 3 0 3 3.000 113 R2U bacteria Leptospira n/a 0.2075 0.1966 3.7389 3 0 3 3.000 111 R2U bacteria Rickettsia n/a 0.2075 0.1966 3.7389 3 0 3 3.000 111 R2U bacteria Lactobacillus n/a 0.1383 0.1311 2.4926 2 0 2 2.000 83 R2U bacteria Myroides n/a 0.1383 0.1311 2.4926 2 0 2 2.000 82 R2U bacteria Enterococcus n/a 0.1383 0.1311 2.4926 2 0 2 2.000 81 R2U bacteria Peptoniphilus n/a 0.1383 0.1311 2.4926 2 0 2 2.000 80 R2U bacteria Campylobacter n/a 0.1383 0.1311 2.4926 2 0 2 2.000 79 R2U bacteria Acetobacter n/a 0.1383 0.1311 2.4926 2 0 2 2.000 78 R2U bacteria Carnobacterium n/a 0.1383 0.1311 2.4926 2 0 2 2.000 76 R2U bacteria Sphingomonas n/a 0.1383 0.1311 2.4926 2 0 2 2.000 76 R2U bacteria Paenibacillus n/a 0.1383 0.1311 2.4926 2 0 2 2.000 76 R2U bacteria Blattabacterium n/a 0.1383 0.1311 2.4926 2 0 2 2.000 75 R2U bacteria Treponema n/a 0.1383 0.1311 2.4926 2 0 2 2.000 75 R2U bacteria Leptotrichia n/a 0.1383 0.1311 2.4926 2 0 2 2.000 75 R2U bacteria Erysipelatoclostridium n/a 0.1383 0.1311 2.4926 2 0 2 2.000 74 R2U bacteria Prevotella n/a 0.1383 0.1311 2.4926 2 0 2 2.000 74 R2U bacteria Oceanobacillus n/a 0.1383 0.1311 2.4926 2 0 2 2.000 73 R2U bacteria Pedobacter n/a 0.1383 0.1311 2.4926 2 0 2 2.000 73 R2U bacteria Blautia n/a 0.1383 0.1311 2.4926 2 0 2 2.000 72 R2U bacteria Frankia n/a 0.1383 0.1311 2.4926 2 0 2 2.000 72 R2U bacteria Cytophaga n/a 0.0981 0.0929 1.7672 2 1 1 1.418 76 R2U bacteria Marinitoga n/a 0.0813 0.0770 1.4644 2 1 1 1.175 100 R2U bacteria Capnocytophaga n/a 0.0692 0.0655 1.2463 1 0 1 1.000 48 R2U bacteria Candidatus_Phytoplasma n/a 0.0692 0.0655 1.2463 1 0 1 1.000 46 R2U bacteria Pseudothermotoga n/a 0.0692 0.0655 1.2463 1 0 1 1.000 46 R2U bacteria Nonlabens n/a 0.0692 0.0655 1.2463 1 0 1 1.000 46 R2U bacteria Borreliella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 45 R2U bacteria Spiroplasma n/a 0.0692 0.0655 1.2463 1 0 1 1.000 45 R2U bacteria Mariniradius n/a 0.0692 0.0655 1.2463 1 0 1 1.000 44 R2U bacteria Terasakiella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 44 R2U bacteria Cetobacterium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 44 R2U bacteria Catenovulum n/a 0.0692 0.0655 1.2463 1 0 1 1.000 44 R2U bacteria Catenibacterium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 43 R2U bacteria Photobacterium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 43 R2U bacteria Gloeocapsa n/a 0.0692 0.0655 1.2463 1 0 1 1.000 42 R2U bacteria Lagierella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 42 R2U bacteria Defluviitalea n/a 0.0692 0.0655 1.2463 1 0 1 1.000 42 R2U bacteria Bibersteinia n/a 0.0692 0.0655 1.2463 1 0 1 1.000 41 R2U bacteria Verrucosispora n/a 0.0692 0.0655 1.2463 1 0 1 1.000 41 R2U bacteria Sulfurihydrogenibium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 41 R2U bacteria Scytonema n/a 0.0692 0.0655 1.2463 1 0 1 1.000 41 R2U bacteria Fournierella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 41 R2U bacteria Caldisalinibacter n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U bacteria Hydrogenobaculum n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U bacteria Draconibacterium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U bacteria Dolichospermum n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U bacteria Citrobacter n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U bacteria Candidatus_Photodesmus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U bacteria Actinobacillus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 39 R2U bacteria Tetragenococcus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 39 R2U bacteria Plesiomonas n/a 0.0692 0.0655 1.2463 1 0 1 1.000 39 R2U bacteria Neofamilia n/a 0.0692 0.0655 1.2463 1 0 1 1.000 39 R2U bacteria Lentisphaera n/a 0.0692 0.0655 1.2463 1 0 1 1.000 39 R2U bacteria Kinetoplastibacterium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 39 R2U bacteria Desulfotomaculum n/a 0.0692 0.0655 1.2463 1 0 1 1.000 39 R2U bacteria Clostridioides n/a 0.0692 0.0655 1.2463 1 0 1 1.000 39 R2U bacteria Burkholderia n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Yersinia n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Vitreoscilla n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Thalassomonas n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Staphylococcus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Sphingobacterium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Runella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Ruminiclostridium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Nautilia n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Microscilla n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Mastigocladopsis n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Legionella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Leeuwenhoekiella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Lachnoclostridium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Hungatella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Holospora n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Hafnia n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Bifidobacterium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 38 R2U bacteria Anaeroarcus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U bacteria Zymomonas n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U bacteria Owenweeksia n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U bacteria Leminorella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U bacteria Kordia n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U bacteria Haemophilus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U bacteria Dyadobacter n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U bacteria Cyanothece n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U bacteria Cohnella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U bacteria Candidatus_Berkiella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U bacteria Candidatus_Amoebophilus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U bacteria Alkaliphilus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Ureaplasma n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Thiomicrospira n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Streptococcus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Stanieria n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Polynucleobacter n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Nostoc n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Marivirga n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Jeotgalibacillus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Edwardsiella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Chloroherpeton n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Arcobacter n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U bacteria Anaerosalibacter n/a << 0.2767 0.2621 4.9852 4 0 4 4.000 168 R2U fungi Trichoderma n/a 0.2767 0.2621 4.9852 4 0 4 4.000 144 R2U fungi Paracoccidioides n/a 0.2075 0.1966 3.7389 3 0 3 3.000 110 R2U fungi Malassezia n/a 0.1383 0.1311 2.4926 2 0 2 2.000 82 R2U fungi Ascoidea n/a 0.1383 0.1311 2.4926 2 0 2 2.000 80 R2U fungi Tetrapisispora n/a 0.1383 0.1311 2.4926 2 0 2 2.000 78 R2U fungi Melampsora n/a 0.1383 0.1311 2.4926 2 0 2 2.000 78 R2U fungi Aspergillus n/a 0.1383 0.1311 2.4926 2 0 2 2.000 76 R2U fungi Blastomyces n/a 0.1383 0.1311 2.4926 2 0 2 2.000 75 R2U fungi Phycomyces n/a 0.1383 0.1311 2.4926 2 0 2 2.000 75 R2U fungi Fusarium n/a 0.1383 0.1311 2.4926 2 0 2 2.000 74 R2U fungi Cordyceps n/a 0.0692 0.0655 1.2463 1 0 1 1.000 46 R2U fungi Candida n/a 0.0692 0.0655 1.2463 1 0 1 1.000 43 R2U fungi Talaromyces n/a 0.0692 0.0655 1.2463 1 0 1 1.000 43 R2U fungi Eutypa n/a 0.0692 0.0655 1.2463 1 0 1 1.000 42 R2U fungi Nosema n/a 0.0692 0.0655 1.2463 1 0 1 1.000 42 R2U fungi Bipolaris n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U fungi Wickerhamomyces n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U fungi Tuber n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U fungi Purpureocillium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U fungi Microsporum n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U fungi Histoplasma n/a 0.0692 0.0655 1.2463 1 0 1 1.000 40 R2U fungi Cladophialophora n/a 0.0692 0.0655 1.2463 1 0 1 1.000 39 R2U fungi Isaria n/a 0.0692 0.0655 1.2463 1 0 1 1.000 39 R2U fungi Batrachochytrium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U fungi Setosphaeria n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U fungi Penicillium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U fungi Metarhizium n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U fungi Kwoniella n/a 0.0692 0.0655 1.2463 1 0 1 1.000 37 R2U fungi Endocarpon n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U fungi Sphaerulina n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U fungi Puccinia n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U fungi Kluyveromyces n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U fungi Hyphopichia n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U fungi Enterocytozoon n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U fungi Colletotrichum n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U fungi Botrytis n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U fungi Arthrobotrys n/a << 0.4842 0.4587 8.7241 7 0 7 7.000 288 R2U viral Lymphocryptovirus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 48 R2U viral Betabaculovirus n/a 0.0692 0.0655 1.2463 1 0 1 1.000 36 R2U viral Phifelvirus n/a