# 2020/03/22 13:57:56 # HUMAN Target (Host) organism # DNA Sequencing source # ERR006373 Replication ID # SRP000547 Sample ID # ERR006373_1.filt Read1 # ERR006373_2.filt Read2 R1 8602938 (100.0000%) [A] Total raw reads R1 8476509 (98.5304%) [B] Total reads after QC of (A) R1 R1 8476509 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R1 14300017 (84.3509%) [B-3] Total mapped reads of (B-2)x2 R1 2653001 (15.6491%) [B-4] Total unmapped reads of (B-2)x2 R1 7134061 (84.1627%) [F] Total mapped reads of (B-2) R1 1342448 (15.8373%) [G] Total unmapped reads of (B-2) R1 344716 (4.0667%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R1 8131793 (95.9333%) [J] Total mapped reads to host genome ( (B-2)-H) R1 94366 (1.1133%) [I-1] Total mapped reads of (H) to exo. genomes R1 11604.575 [I-3] RPMH of (I-1) R1 11132.649 [I-4] PPM of (I-1) R1 273749.986 [I-5] RPMU of (I-1) R1 51 (0.0006%) [I-6] Total chimeric reads of (I-1) R1 6.272 [I-7] RPMH of (I-6) R1 6.017 [I-8] PPM of (I-6) R1 147.948 [I-9] RPMU of (I-6) R1 ## ----------------------------------------- R2 8602938 (100.0000%) [A] Total raw reads R2 8476509 (98.5304%) [B] Total reads after QC of (A) R2 R2 8476509 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R2 14300017 (84.3509%) [B-3] Total mapped reads of (B-2)x2 R2 2653001 (15.6491%) [B-4] Total unmapped reads of (B-2)x2 R2 7165956 (84.5390%) [F] Total mapped reads of (B-2) R2 1310553 (15.4610%) [G] Total unmapped reads of (B-2) R2 322355 (3.8029%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R2 8154154 (96.1971%) [J] Total mapped reads to host genome ( (B-2)-H) R2 94850 (1.1190%) [I-1] Total mapped reads of (H) to exo. genomes R2 11632.108 [I-3] RPMH of (I-1) R2 11189.748 [I-4] PPM of (I-1) R2 294240.821 [I-5] RPMU of (I-1) R2 34 (0.0004%) [I-6] Total chimeric reads of (I-1) R2 4.170 [I-7] RPMH of (I-6) R2 4.011 [I-8] PPM of (I-6) R2 105.474 [I-9] RPMU of (I-6) R2 ## ----------------------------------------- ##=============================================## # List threshold of RPMU > 1 # List threshold of P-value < 0.001 # RPMH PPM RPMU Total Multi_Reads(All_ExoGenus) Uniq_Reads(This_Genus) wTotal Sum_ReadLength Type Exo Genus Pvalue(Uniq) 133.5534 128.1222 3150.5036 2200 1199 1001 1086.029 110491 ALL_R1 bacteria Serratia 0.0 << 10990.5391 10543.5845 259264.9862 89374 2 89372 89372.789 4479135 ALL_R1 viral Lymphocryptovirus 0.0 139.2160 133.5545 3284.0831 2514 2283 231 1132.076 126519 ALL_R1 viral Mastadenovirus 0.0 << 147.8992 142.2747 3741.1953 2103 942 1161 1205.993 106380 ALL_R2 bacteria Serratia 0.0 << 11032.4614 10612.9055 279072.4171 89961 1 89960 89960.389 4546172 ALL_R2 viral Lymphocryptovirus 0.0 136.7730 131.5716 3459.7509 2472 2222 250 1115.268 125458 ALL_R2 viral Mastadenovirus 0.0 << 0.1230 0.1180 2.9009 1 0 1 1.000 51 R1U bacteria Serratia n/a 0.1230 0.1180 2.9009 1 0 1 1.000 51 R1U bacteria Alcanivorax n/a 0.1230 0.1180 2.9009 1 0 1 1.000 37 R1U bacteria Criblamydia n/a 0.1230 0.1180 2.9009 1 0 1 1.000 37 R1U bacteria Cellulomonas n/a 0.1230 0.1180 2.9009 1 0 1 1.000 36 R1U bacteria Spirillospora n/a << 0.1230 0.1180 2.9009 1 0 1 1.000 51 R1U fungi Aspergillus n/a << 5.1649 4.9549 121.8394 42 0 42 42.000 2099 R1U viral Lymphocryptovirus n/a 0.2459 0.2359 5.8019 2 0 2 2.000 100 R1U viral Lambdavirus n/a 0.1230 0.1180 2.9009 1 0 1 1.000 51 R1U viral Mastadenovirus n/a << 0.1226 0.1180 3.1022 1 0 1 1.000 51 R2U bacteria Serratia n/a 0.1226 0.1180 3.1022 1 0 1 1.000 51 R2U bacteria Rhizobacter n/a 0.1226 0.1180 3.1022 1 0 1 1.000 41 R2U bacteria Ideonella n/a 0.1226 0.1180 3.1022 1 0 1 1.000 39 R2U bacteria Actinomadura n/a << 0.1226 0.1180 3.1022 1 0 1 1.000 51 R2U fungi Malassezia n/a 0.1226 0.1180 3.1022 1 0 1 1.000 51 R2U fungi Botrytis n/a << 2.9433 2.8314 74.4521 24 0 24 24.000 1216 R2U viral Lymphocryptovirus n/a 0.1226 0.1180 3.1022 1 0 1 1.000 51 R2U viral Lambdavirus n/a