# 2020/03/15 21:31:34 # HUMAN Target (Host) organism # DNA Sequencing source # SRR792770 Replication ID # SRP000547 Sample ID # SRR792770_1.filt Read1 # SRR792770_2.filt Read2 R1 11117380 (100.0000%) [A] Total raw reads R1 8919669 (80.2318%) [B] Total reads after QC of (A) R1 R1 8919669 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R1 16446786 (92.1939%) [B-3] Total mapped reads of (B-2)x2 R1 1392552 (7.8061%) [B-4] Total unmapped reads of (B-2)x2 R1 8270568 (92.7228%) [F] Total mapped reads of (B-2) R1 649101 (7.2772%) [G] Total unmapped reads of (B-2) R1 67345 (0.7550%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R1 8852324 (99.2450%) [J] Total mapped reads to host genome ( (B-2)-H) R1 3679 (0.0412%) [I-1] Total mapped reads of (H) to exo. genomes R1 415.597 [I-3] RPMH of (I-1) R1 412.459 [I-4] PPM of (I-1) R1 54629.148 [I-5] RPMU of (I-1) R1 22 (0.0002%) [I-6] Total chimeric reads of (I-1) R1 2.485 [I-7] RPMH of (I-6) R1 2.466 [I-8] PPM of (I-6) R1 326.676 [I-9] RPMU of (I-6) R1 ## ----------------------------------------- R2 11117380 (100.0000%) [A] Total raw reads R2 8919669 (80.2318%) [B] Total reads after QC of (A) R2 R2 8919669 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R2 16446786 (92.1939%) [B-3] Total mapped reads of (B-2)x2 R2 1392552 (7.8061%) [B-4] Total unmapped reads of (B-2)x2 R2 8176218 (91.6650%) [F] Total mapped reads of (B-2) R2 743451 (8.3350%) [G] Total unmapped reads of (B-2) R2 106443 (1.1934%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R2 8813226 (98.8066%) [J] Total mapped reads to host genome ( (B-2)-H) R2 3653 (0.0410%) [I-1] Total mapped reads of (H) to exo. genomes R2 414.491 [I-3] RPMH of (I-1) R2 409.544 [I-4] PPM of (I-1) R2 34318.837 [I-5] RPMU of (I-1) R2 33 (0.0004%) [I-6] Total chimeric reads of (I-1) R2 3.744 [I-7] RPMH of (I-6) R2 3.700 [I-8] PPM of (I-6) R2 310.025 [I-9] RPMU of (I-6) R2 ## ----------------------------------------- ##=============================================## # List threshold of RPMU > 1 # List threshold of P-value < 0.001 # RPMH PPM RPMU Total Multi_Reads(All_ExoGenus) Uniq_Reads(This_Genus) wTotal Sum_ReadLength Type Exo Genus Pvalue(Uniq) 1.8618 1.8477 244.7249 34 26 8 16.481 2774 ALL_R1 bacteria Eubacterium 4.84e-08 << 408.3673 405.2841 53678.8180 3615 0 3615 3615.000 312238 ALL_R1 viral Lymphocryptovirus 0.0 1.2426 1.2332 163.3380 11 0 11 11.000 967 ALL_R1 viral Betaretrovirus 1.22e-39 << 1.9308 1.9078 159.8696 36 28 8 17.017 2956 ALL_R2 bacteria Eubacterium 3.81e-08 1.5772 1.5584 130.5863 31 25 6 13.900 2731 ALL_R2 bacteria Campylobacter 9.55e-04 << 405.9807 401.1360 33614.2348 3578 0 3578 3578.000 312416 ALL_R2 viral Lymphocryptovirus 0.0 0.9077 0.8969 75.1576 8 0 8 8.000 803 ALL_R2 viral Betaretrovirus 4.49e-20 << 2.2593 2.2422 296.9782 20 0 20 20.000 1853 R1U viral Lymphocryptovirus n/a 0.2259 0.2242 29.6978 2 0 2 2.000 108 R1U viral Betaretrovirus n/a << 0.1135 0.1121 9.3947 1 0 1 1.000 42 R2U bacteria Gracilibacillus n/a 0.1135 0.1121 9.3947 1 0 1 1.000 39 R2U bacteria Carnobacterium n/a 0.1135 0.1121 9.3947 1 0 1 1.000 36 R2U bacteria Flavobacterium n/a << 0.1156 0.1142 9.5732 2 1 1 1.019 77 R2U fungi Rasamsonia n/a 0.1156 0.1142 9.5732 2 1 1 1.019 77 R2U fungi Paracoccidioides n/a << 3.0636 3.0270 253.6569 27 0 27 27.000 2378 R2U viral Lymphocryptovirus n/a