# 2020/03/11 22:11:07 # HUMAN Target (Host) organism # RNA Sequencing source # ERR188423 Replication ID # ERR188423 Sample ID # ERR188423_1 Read1 # ERR188423_2 Read2 R1 27002638 (100.0000%) [A] Total raw reads R1 26370194 (97.6578%) [B] Total reads after QC of (A) R1 R1 26370194 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R1 49415428 (93.6956%) [B-3] Total mapped reads of (B-2)x2 R1 3324960 (6.3044%) [B-4] Total unmapped reads of (B-2)x2 R1 24780047 (93.9699%) [F] Total mapped reads of (B-2) R1 1590147 (6.0301%) [G] Total unmapped reads of (B-2) R1 143856 (0.5455%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R1 26226338 (99.4545%) [J] Total mapped reads to host genome ( (B-2)-H) R1 76847 (0.2914%) [I-1] Total mapped reads of (H) to exo. genomes R1 2930.146 [I-3] RPMH of (I-1) R1 2914.161 [I-4] PPM of (I-1) R1 534193.916 [I-5] RPMU of (I-1) R1 83 (0.0003%) [I-6] Total chimeric reads of (I-1) R1 3.165 [I-7] RPMH of (I-6) R1 3.148 [I-8] PPM of (I-6) R1 576.966 [I-9] RPMU of (I-6) R1 ## ----------------------------------------- R2 27002638 (100.0000%) [A] Total raw reads R2 26370194 (97.6578%) [B] Total reads after QC of (A) R2 R2 26370194 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R2 49415428 (93.6956%) [B-3] Total mapped reads of (B-2)x2 R2 3324960 (6.3044%) [B-4] Total unmapped reads of (B-2)x2 R2 24635381 (93.4213%) [F] Total mapped reads of (B-2) R2 1734813 (6.5787%) [G] Total unmapped reads of (B-2) R2 211559 (0.8023%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R2 26158635 (99.1977%) [J] Total mapped reads to host genome ( (B-2)-H) R2 75759 (0.2873%) [I-1] Total mapped reads of (H) to exo. genomes R2 2896.137 [I-3] RPMH of (I-1) R2 2872.903 [I-4] PPM of (I-1) R2 358098.686 [I-5] RPMU of (I-1) R2 104 (0.0004%) [I-6] Total chimeric reads of (I-1) R2 3.976 [I-7] RPMH of (I-6) R2 3.944 [I-8] PPM of (I-6) R2 491.589 [I-9] RPMU of (I-6) R2 ## ----------------------------------------- ##=============================================## # List threshold of RPMU > 1 # List threshold of P-value < 0.001 # RPMH PPM RPMU Total Multi_Reads(All_ExoGenus) Uniq_Reads(This_Genus) wTotal Sum_ReadLength Type Exo Genus Pvalue(Uniq) 12.1618 12.0955 2217.2172 342 44 298 318.960 25066 ALL_R1 bacteria Escherichia 0.0 << 976.3468 971.0205 177997.4419 25606 0 25606 25606.000 1909566 ALL_R1 viral Lymphocryptovirus 0.0 700.0576 696.2386 127627.2523 50107 50106 1 18359.946 3727866 ALL_R1 viral Phix174microvirus n/a << 12.0392 11.9426 1488.6107 338 43 295 314.929 24255 ALL_R2 bacteria Escherichia 0.0 << 971.4956 963.7017 120122.5190 25413 0 25413 25413.000 1883251 ALL_R2 viral Lymphocryptovirus 0.0 624.0327 619.0263 77159.7710 49099 49098 1 16323.844 3584723 ALL_R2 viral Phix174microvirus n/a << 0.0381 0.0379 6.9514 1 0 1 1.000 42 R1U bacteria Synechococcus n/a 0.0381 0.0379 6.9514 1 0 1 1.000 36 R1U bacteria Desulfovibrio n/a << 0.0381 0.0379 6.9514 1 0 1 1.000 66 R1U fungi Penicillium n/a 0.0381 0.0379 6.9514 1 0 1 1.000 55 R1U fungi Punctularia n/a << 2.4022 2.3891 437.9379 63 0 63 63.000 4535 R1U viral Lymphocryptovirus n/a << 0.0673 0.0667 8.3192 2 1 1 1.760 103 R2U bacteria Thioalkalivibrio n/a 0.0382 0.0379 4.7268 1 0 1 1.000 51 R2U bacteria Bacillus n/a 0.0382 0.0379 4.7268 1 0 1 1.000 43 R2U bacteria Microbulbifer n/a 0.0382 0.0379 4.7268 1 0 1 1.000 39 R2U bacteria Tolypothrix n/a 0.0382 0.0379 4.7268 1 0 1 1.000 39 R2U bacteria Microbispora n/a 0.0382 0.0379 4.7268 1 0 1 1.000 39 R2U bacteria Corynebacterium n/a 0.0382 0.0379 4.7268 1 0 1 1.000 36 R2U bacteria Magnetospirillum n/a << 0.1276 0.1265 15.7734 4 2 2 3.337 247 R2U fungi Pyrenophora n/a 0.1276 0.1265 15.7734 4 2 2 3.337 206 R2U fungi Microsporum n/a 0.0765 0.0758 9.4536 2 0 2 2.000 112 R2U fungi Trichosporon n/a 0.0765 0.0758 9.4536 2 0 2 2.000 101 R2U fungi Auricularia n/a 0.0456 0.0452 5.6344 2 1 1 1.192 134 R2U fungi Isaria n/a 0.0456 0.0452 5.6344 2 1 1 1.192 126 R2U fungi Sporothrix n/a 0.0382 0.0379 4.7268 1 0 1 1.000 61 R2U fungi Lodderomyces n/a 0.0382 0.0379 4.7268 1 0 1 1.000 57 R2U fungi Punctularia n/a 0.0382 0.0379 4.7268 1 0 1 1.000 51 R2U fungi Gloeophyllum n/a 0.0382 0.0379 4.7268 1 0 1 1.000 50 R2U fungi Schizosaccharomyces n/a 0.0382 0.0379 4.7268 1 0 1 1.000 48 R2U fungi Phycomyces n/a 0.0382 0.0379 4.7268 1 0 1 1.000 48 R2U fungi Blastomyces n/a 0.0382 0.0379 4.7268 1 0 1 1.000 46 R2U fungi Capronia n/a 0.0382 0.0379 4.7268 1 0 1 1.000 45 R2U fungi Spizellomyces n/a 0.0382 0.0379 4.7268 1 0 1 1.000 45 R2U fungi Cutaneotrichosporon n/a 0.0382 0.0379 4.7268 1 0 1 1.000 42 R2U fungi Ustilago n/a 0.0382 0.0379 4.7268 1 0 1 1.000 40 R2U fungi Fibroporia n/a 0.0382 0.0379 4.7268 1 0 1 1.000 40 R2U fungi Exophiala n/a 0.0382 0.0379 4.7268 1 0 1 1.000 38 R2U fungi Thielavia n/a 0.0382 0.0379 4.7268 1 0 1 1.000 37 R2U fungi Purpureocillium n/a << 2.1408 2.1236 264.7016 56 0 56 56.000 4076 R2U viral Lymphocryptovirus n/a