#Unique_Reads Genus Species # 6 reads uniquely mapped to Achromobacter (multi-hits among diff. species in Achromobacter allowed) 3 Achromobacter Achromobacter xylosoxidans 1 Achromobacter Achromobacter xylosoxidans C54 1 Achromobacter Achromobacter sp. DMS1 1 Achromobacter Achromobacter denitrificans # 5 reads uniquely mapped to Acidovorax (multi-hits among diff. species in Acidovorax allowed) 2 Acidovorax Acidovorax sp. JS42 1 Acidovorax Acidovorax sp. RAC01 1 Acidovorax Acidovorax sp. Root217 1 Acidovorax Acidovorax ebreus TPSY # 49556 reads uniquely mapped to Acinetobacter (multi-hits among diff. species in Acinetobacter allowed) 49544 Acinetobacter Acinetobacter rudis 4 Acinetobacter Acinetobacter junii 2 Acinetobacter Acinetobacter gyllenbergii NIPH 230 1 Acinetobacter Acinetobacter equi 1 Acinetobacter Acinetobacter brisouii CIP 110357 1 Acinetobacter Acinetobacter johnsonii XBB1 1 Acinetobacter Acinetobacter tandoii DSM 14970 = CIP 107469 1 Acinetobacter Acinetobacter baumannii 1 Acinetobacter Acinetobacter harbinensis # 2 reads uniquely mapped to Aerococcus (multi-hits among diff. species in Aerococcus allowed) 2 Aerococcus Aerococcus viridans # 3 reads uniquely mapped to Aquabacterium (multi-hits among diff. species in Aquabacterium allowed) 2 Aquabacterium Aquabacterium sp. NJ1 1 Aquabacterium Aquabacterium parvum # 2 reads uniquely mapped to Arthrobacter (multi-hits among diff. species in Arthrobacter allowed) 2 Arthrobacter Arthrobacter sp. L77 # 3 reads uniquely mapped to Bordetella (multi-hits among diff. species in Bordetella allowed) 2 Bordetella Bordetella pertussis 1 Bordetella Bordetella bronchiseptica # 4 reads uniquely mapped to Brevundimonas (multi-hits among diff. species in Brevundimonas allowed) 2 Brevundimonas Brevundimonas sp. Leaf363 1 Brevundimonas Brevundimonas sp. DS20 1 Brevundimonas Brevundimonas bacteroides DSM 4726 # 3 reads uniquely mapped to Campylobacter (multi-hits among diff. species in Campylobacter allowed) 2 Campylobacter Campylobacter mucosalis 1 Campylobacter Campylobacter sp. MIT 97-5078 # 6 reads uniquely mapped to Cedecea (multi-hits among diff. species in Cedecea allowed) 4 Cedecea Cedecea neteri 2 Cedecea Dickeya solani # 6 reads uniquely mapped to Delftia (multi-hits among diff. species in Delftia allowed) 3 Delftia Delftia acidovorans SPH-1 1 Delftia Delftia sp. Cs1-4 1 Delftia Delftia tsuruhatensis 1 Delftia Delftia sp. HK171 # 2 reads uniquely mapped to Desulfovibrio (multi-hits among diff. species in Desulfovibrio allowed) 1 Desulfovibrio Desulfovibrio frigidus DSM 17176 1 Desulfovibrio Desulfovibrio desulfuricans ND132 # 1 reads uniquely mapped to Dietzia (multi-hits among diff. species in Dietzia allowed) 1 Dietzia Dietzia maris # 304 reads uniquely mapped to Escherichia (multi-hits among diff. species in Escherichia allowed) 182 Escherichia Escherichia coli 21 Escherichia Escherichia coli K-12 10 Escherichia Escherichia coli O157:H7 9 Escherichia Escherichia coli str. K-12 substr. MG1655 5 Escherichia Escherichia coli O157 5 Escherichia Escherichia coli BL21(DE3) 4 Escherichia Escherichia coli 042 3 Escherichia Escherichia coli P12b 3 Escherichia Escherichia coli ATCC 8739 3 Escherichia Escherichia coli B 3 Escherichia Escherichia coli ER2796 3 Escherichia Escherichia coli str. K-12 substr. W3110 3 Escherichia Escherichia coli ACN001 3 Escherichia Escherichia coli str. K-12 substr. DH10B 2 Escherichia Escherichia coli DH1 2 Escherichia Escherichia coli HS 2 Escherichia Escherichia coli W 2 Escherichia Escherichia coli SMS-3-5 2 Escherichia Escherichia coli 1303 2 Escherichia Escherichia coli 'BL21-Gold(DE3)pLysS AG' 2 Escherichia Escherichia coli str. K-12 substr. MC4100 2 Escherichia Escherichia coli O104:H4 str. 2009EL-2071 1 Escherichia Escherichia coli O104:H4 str. 2009EL-2050 1 Escherichia Escherichia coli O111:H- str. 11128 1 Escherichia Escherichia coli O145:H28 str. RM13514 1 Escherichia Escherichia coli APEC IMT5155 1 Escherichia Escherichia coli APEC O78 1 Escherichia Escherichia coli O157:H7 str. Sakai 1 Escherichia Escherichia coli UMNK88 1 Escherichia Escherichia coli O7:K1 str. CE10 1 Escherichia Escherichia coli PCN061 1 Escherichia Escherichia coli O26:H11 str. 11368 1 Escherichia Escherichia coli BW25113 1 Escherichia Escherichia coli SE15 1 Escherichia Escherichia coli UMN026 1 Escherichia Escherichia coli O145:H28 str. RM13516 1 Escherichia Escherichia coli IAI39 1 Escherichia NZ_CP014492 1 Escherichia Escherichia coli str. Sanji 1 Escherichia NZ_CP014670 1 Escherichia Escherichia coli VR50 1 Escherichia Escherichia coli IAI1 1 Escherichia Escherichia coli B str. REL606 1 Escherichia Escherichia coli O157:H16 1 Escherichia NZ_CP018770 1 Escherichia Escherichia coli O25b:H4-ST131 1 Escherichia Escherichia coli JJ1887 1 Escherichia Escherichia coli ATCC 25922 1 Escherichia Escherichia coli O139:H28 str. E24377A 1 Escherichia Escherichia coli O104:H4 str. C227-11 1 Escherichia Escherichia coli O55:H7 str. CB9615 1 Escherichia Escherichia coli O157:H7 str. TW14359 1 Escherichia Escherichia coli O104:H4 str. 2011C-3493 # 2 reads uniquely mapped to Eubacterium (multi-hits among diff. species in Eubacterium allowed) 1 Eubacterium [Eubacterium] hallii DSM 3353 1 Eubacterium Eubacterium sp. AB3007 # 1 reads uniquely mapped to Gardnerella (multi-hits among diff. species in Gardnerella allowed) 1 Gardnerella Gardnerella vaginalis HMP9231 # 2 reads uniquely mapped to Gemella (multi-hits among diff. species in Gemella allowed) 1 Gemella Gemella haemolysans ATCC 10379 1 Gemella Gemella sanguinis ATCC 700632 # 1 reads uniquely mapped to Hymenobacter (multi-hits among diff. species in Hymenobacter allowed) 1 Hymenobacter Hymenobacter terrenus # 4 reads uniquely mapped to Kocuria (multi-hits among diff. species in Kocuria allowed) 2 Kocuria Kocuria polaris 2 Kocuria Kocuria rhizophila DC2201 # 3 reads uniquely mapped to Meiothermus (multi-hits among diff. species in Meiothermus allowed) 3 Meiothermus Meiothermus silvanus DSM 9946 # 49867 reads uniquely mapped to Microbacterium (multi-hits among diff. species in Microbacterium allowed) 49864 Microbacterium Microbacterium sp. C448 1 Microbacterium Microbacterium azadirachtae 1 Microbacterium Microbacterium ketosireducens 1 Microbacterium Microbacterium sp. Root53 # 3 reads uniquely mapped to Nocardioides (multi-hits among diff. species in Nocardioides allowed) 2 Nocardioides Nocardioides sp. Soil797 1 Nocardioides Nocardioides sp. Root682 # 4 reads uniquely mapped to Paraburkholderia (multi-hits among diff. species in Paraburkholderia allowed) 2 Paraburkholderia Paraburkholderia sacchari 1 Paraburkholderia Paraburkholderia fungorum 1 Paraburkholderia Paraburkholderia sprentiae WSM5005 # 3 reads uniquely mapped to Pelomonas (multi-hits among diff. species in Pelomonas allowed) 3 Pelomonas Pelomonas sp. Root662 # 49572 reads uniquely mapped to Pseudomonas (multi-hits among diff. species in Pseudomonas allowed) 49560 Pseudomonas Pseudomonas pelagia CL-AP6 3 Pseudomonas Pseudomonas sp. LPH1 2 Pseudomonas Pseudomonas fluorescens 1 Pseudomonas Pseudomonas chlororaphis 1 Pseudomonas Pseudomonas alcaliphila JAB1 1 Pseudomonas Pseudomonas pseudoalcaligenes CECT 5344 1 Pseudomonas Pseudomonas pseudoalcaligenes 1 Pseudomonas Pseudomonas balearica DSM 6083 1 Pseudomonas Pseudomonas aeruginosa SCV20265 1 Pseudomonas Pseudomonas oryzihabitans # 18 reads uniquely mapped to Ralstonia (multi-hits among diff. species in Ralstonia allowed) 8 Ralstonia Ralstonia insidiosa 7 Ralstonia Ralstonia pickettii 12J 2 Ralstonia Ralstonia solanacearum FJAT-1458 1 Ralstonia Ralstonia mannitolilytica # 1 reads uniquely mapped to Rhodococcus (multi-hits among diff. species in Rhodococcus allowed) 1 Rhodococcus Rhodococcus fascians D188 # 7 reads uniquely mapped to Serratia (multi-hits among diff. species in Serratia allowed) 4 Serratia Serratia marcescens 1 Serratia Serratia sp. AS13 1 Serratia Serratia plymuthica S13 1 Serratia Serratia marcescens SM39 # 11 reads uniquely mapped to Sphingomonas (multi-hits among diff. species in Sphingomonas allowed) 4 Sphingomonas Sphingomonas sp. Leaf33 2 Sphingomonas Sphingomonas echinoides ATCC 14820 1 Sphingomonas Sphingomonas sp. Leaf412 1 Sphingomonas Sphingomonas panacis 1 Sphingomonas Sphingomonas sp. JJ-A5 1 Sphingomonas Sphingomonas astaxanthinifaciens DSM 22298 1 Sphingomonas Sphingomonas jaspsi DSM 18422 # 3 reads uniquely mapped to Staphylococcus (multi-hits among diff. species in Staphylococcus allowed) 1 Staphylococcus Staphylococcus saprophyticus 1 Staphylococcus Staphylococcus equorum 1 Staphylococcus Staphylococcus epidermidis # 3 reads uniquely mapped to Streptococcus (multi-hits among diff. species in Streptococcus allowed) 1 Streptococcus Streptococcus sp. I-P16 1 Streptococcus Streptococcus oralis 1 Streptococcus Streptococcus pneumoniae D39 # 2 reads uniquely mapped to Synechococcus (multi-hits among diff. species in Synechococcus allowed) 1 Synechococcus Synechococcus sp. SynAce01 1 Synechococcus Synechococcus sp. WH 7803