# 2020/03/05 19:38:38 # HUMAN Target (Host) organism # RNA Sequencing source # ERR188363 Replication ID # ERR188363 Sample ID # ERR188363_1 Read1 # ERR188363_2 Read2 R1 37901571 (100.0000%) [A] Total raw reads R1 36937870 (97.4574%) [B] Total reads after QC of (A) R1 R1 36937870 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R1 67978685 (92.0176%) [B-3] Total mapped reads of (B-2)x2 R1 5897055 (7.9824%) [B-4] Total unmapped reads of (B-2)x2 R1 34082188 (92.2690%) [F] Total mapped reads of (B-2) R1 2855682 (7.7310%) [G] Total unmapped reads of (B-2) R1 388563 (1.0519%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R1 36549307 (98.9481%) [J] Total mapped reads to host genome ( (B-2)-H) R1 281061 (0.7609%) [I-1] Total mapped reads of (H) to exo. genomes R1 7689.913 [I-3] RPMH of (I-1) R1 7609.020 [I-4] PPM of (I-1) R1 723334.440 [I-5] RPMU of (I-1) R1 845 (0.0023%) [I-6] Total chimeric reads of (I-1) R1 23.120 [I-7] RPMH of (I-6) R1 22.876 [I-8] PPM of (I-6) R1 2174.679 [I-9] RPMU of (I-6) R1 ## ----------------------------------------- R2 37901571 (100.0000%) [A] Total raw reads R2 36937870 (97.4574%) [B] Total reads after QC of (A) R2 R2 36937870 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R2 67978685 (92.0176%) [B-3] Total mapped reads of (B-2)x2 R2 5897055 (7.9824%) [B-4] Total unmapped reads of (B-2)x2 R2 33896497 (91.7662%) [F] Total mapped reads of (B-2) R2 3041373 (8.2338%) [G] Total unmapped reads of (B-2) R2 484419 (1.3114%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R2 36453451 (98.6886%) [J] Total mapped reads to host genome ( (B-2)-H) R2 274256 (0.7425%) [I-1] Total mapped reads of (H) to exo. genomes R2 7523.458 [I-3] RPMH of (I-1) R2 7424.792 [I-4] PPM of (I-1) R2 566154.507 [I-5] RPMU of (I-1) R2 709 (0.0019%) [I-6] Total chimeric reads of (I-1) R2 19.450 [I-7] RPMH of (I-6) R2 19.194 [I-8] PPM of (I-6) R2 1463.609 [I-9] RPMU of (I-6) R2 ## ----------------------------------------- ##=============================================## # List threshold of RPMU > 1 # List threshold of P-value < 0.001 # RPMH PPM RPMU Total Multi_Reads(All_ExoGenus) Uniq_Reads(This_Genus) wTotal Sum_ReadLength Type Exo Genus Pvalue(Uniq) 5.9370 5.8746 558.4526 252 43 209 216.994 18835 ALL_R1 bacteria Escherichia 4.72e-13 << 6570.6991 6501.5795 618058.0704 240155 1 240154 240154.498 17951807 ALL_R1 viral Lymphocryptovirus 0.0 << 5.0222 4.9564 377.9332 215 38 177 183.078 13882 ALL_R2 bacteria Escherichia 1.06e-07 << 6551.6580 6465.7368 493024.7265 238831 1 238830 238830.545 17737296 ALL_R2 viral Lymphocryptovirus 0.0 45.0937 44.5023 3393.3847 34354 34351 3 1643.820 2315450 ALL_R2 viral Phix174microvirus n/a << 0.8168 0.8082 76.8344 238 237 1 29.855 16297 R1U bacteria Pseudomonas n/a 0.0547 0.0541 5.1472 2 0 2 2.000 134 R1U bacteria Novosphingobium n/a 0.0274 0.0271 2.5736 1 0 1 1.000 76 R1U bacteria Ralstonia n/a 0.0274 0.0271 2.5736 1 0 1 1.000 76 R1U bacteria Lachnoclostridium n/a 0.0274 0.0271 2.5736 1 0 1 1.000 55 R1U bacteria Flammeovirga n/a << 0.0307 0.0304 2.8901 2 1 1 1.123 86 R1U fungi Fusarium n/a 0.0274 0.0271 2.5736 1 0 1 1.000 73 R1U fungi Kalmanozyma n/a 0.0274 0.0271 2.5736 1 0 1 1.000 66 R1U fungi Gloeophyllum n/a << 16.1426 15.9728 1518.4153 590 0 590 590.000 43792 R1U viral Lymphocryptovirus n/a << 0.0549 0.0541 4.1287 2 0 2 2.000 76 R2U bacteria Shewanella n/a 0.0549 0.0541 4.1287 2 0 2 2.000 75 R2U bacteria Methylobacillus n/a 0.0301 0.0297 2.2625 3 2 1 1.096 179 R2U bacteria Cystobacter n/a 0.0301 0.0297 2.2625 3 2 1 1.096 175 R2U bacteria Paenibacillus n/a 0.0301 0.0297 2.2625 3 2 1 1.096 175 R2U bacteria Mesorhizobium n/a 0.0274 0.0271 2.0643 1 0 1 1.000 58 R2U bacteria Photorhabdus n/a 0.0274 0.0271 2.0643 1 0 1 1.000 54 R2U bacteria Dethiobacter n/a 0.0274 0.0271 2.0643 1 0 1 1.000 42 R2U bacteria Lachnoclostridium n/a 0.0274 0.0271 2.0643 1 0 1 1.000 39 R2U bacteria Asticcacaulis n/a 0.0274 0.0271 2.0643 1 0 1 1.000 38 R2U bacteria Cesiribacter n/a 0.0274 0.0271 2.0643 1 0 1 1.000 36 R2U bacteria Geobacter n/a << 0.1247 0.1231 9.3865 6 2 4 4.547 317 R2U fungi Colletotrichum n/a 0.0885 0.0874 6.6616 6 5 1 3.227 326 R2U fungi Aureobasidium n/a 0.0885 0.0874 6.6616 6 5 1 3.227 315 R2U fungi Microsporum n/a 0.0851 0.0840 6.4035 5 2 3 3.102 220 R2U fungi Fonsecaea n/a 0.0823 0.0812 6.1930 3 0 3 3.000 171 R2U fungi Moniliophthora n/a 0.0711 0.0702 5.3528 4 2 2 2.593 191 R2U fungi Rasamsonia n/a 0.0698 0.0689 5.2537 3 1 2 2.545 145 R2U fungi Anthracocystis n/a 0.0522 0.0515 3.9305 5 4 1 1.904 282 R2U fungi Aspergillus n/a 0.0506 0.0499 3.8046 4 3 1 1.843 217 R2U fungi Neofusicoccum n/a 0.0505 0.0498 3.8004 3 2 1 1.841 187 R2U fungi Gaeumannomyces n/a 0.0462 0.0456 3.4743 5 4 1 1.683 281 R2U fungi Penicillium n/a 0.0448 0.0442 3.3710 3 2 1 1.633 143 R2U fungi Schizosaccharomyces n/a 0.0428 0.0423 3.2224 4 3 1 1.561 206 R2U fungi Chaetomium n/a 0.0424 0.0418 3.1894 2 1 1 1.545 86 R2U fungi Verruconis n/a 0.0360 0.0355 2.7063 3 2 1 1.311 151 R2U fungi Pestalotiopsis n/a 0.0356 0.0351 2.6774 2 1 1 1.297 96 R2U fungi Metschnikowia n/a 0.0356 0.0351 2.6774 2 1 1 1.297 81 R2U fungi Babjeviella n/a 0.0298 0.0295 2.2460 2 1 1 1.088 103 R2U fungi Postia n/a 0.0298 0.0295 2.2460 2 1 1 1.088 100 R2U fungi Talaromyces n/a 0.0279 0.0275 2.0974 3 2 1 1.016 163 R2U fungi Verticillium n/a 0.0275 0.0271 2.0685 2 1 1 1.002 132 R2U fungi Tsuchiyaea n/a 0.0275 0.0271 2.0685 2 1 1 1.002 113 R2U fungi Baudoinia n/a 0.0274 0.0271 2.0643 1 0 1 1.000 62 R2U fungi Leptosphaeria n/a 0.0274 0.0271 2.0643 1 0 1 1.000 55 R2U fungi Ordospora n/a 0.0274 0.0271 2.0643 1 0 1 1.000 53 R2U fungi Coprinopsis n/a 0.0274 0.0271 2.0643 1 0 1 1.000 50 R2U fungi Dichomitus n/a 0.0274 0.0271 2.0643 1 0 1 1.000 49 R2U fungi Thielavia n/a 0.0274 0.0271 2.0643 1 0 1 1.000 49 R2U fungi Fomitiporia n/a 0.0274 0.0271 2.0643 1 0 1 1.000 46 R2U fungi Encephalitozoon n/a 0.0274 0.0271 2.0643 1 0 1 1.000 41 R2U fungi Candida n/a 0.0274 0.0271 2.0643 1 0 1 1.000 39 R2U fungi Nosema n/a 0.0274 0.0271 2.0643 1 0 1 1.000 38 R2U fungi Cutaneotrichosporon n/a << 17.1177 16.8932 1288.1411 624 0 624 624.000 45293 R2U viral Lymphocryptovirus n/a 0.0274 0.0271 2.0643 1 0 1 1.000 75 R2U viral Pestivirus n/a