# 2020/02/20 23:24:21 # HUMAN Target (Host) organism # RNA Sequencing source # ERR188213 Replication ID # ERR188213 Sample ID # ERR188213_1 Read1 # ERR188213_2 Read2 R1 33049561 (100.0000%) [A] Total raw reads R1 32371593 (97.9486%) [B] Total reads after QC of (A) R1 R1 32371593 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R1 60345244 (93.2071%) [B-3] Total mapped reads of (B-2)x2 R1 4397942 (6.7929%) [B-4] Total unmapped reads of (B-2)x2 R1 30218249 (93.3480%) [F] Total mapped reads of (B-2) R1 2153344 (6.6520%) [G] Total unmapped reads of (B-2) R1 161623 (0.4993%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R1 32209970 (99.5007%) [J] Total mapped reads to host genome ( (B-2)-H) R1 118656 (0.3665%) [I-1] Total mapped reads of (H) to exo. genomes R1 3683.828 [I-3] RPMH of (I-1) R1 3665.436 [I-4] PPM of (I-1) R1 734152.936 [I-5] RPMU of (I-1) R1 766 (0.0024%) [I-6] Total chimeric reads of (I-1) R1 23.782 [I-7] RPMH of (I-6) R1 23.663 [I-8] PPM of (I-6) R1 4739.425 [I-9] RPMU of (I-6) R1 ## ----------------------------------------- R2 33049561 (100.0000%) [A] Total raw reads R2 32371593 (97.9486%) [B] Total reads after QC of (A) R2 R2 32371593 (100.0000%) [B-2] Total reads of (B) passed to HISAT2 R2 60345244 (93.2071%) [B-3] Total mapped reads of (B-2)x2 R2 4397942 (6.7929%) [B-4] Total unmapped reads of (B-2)x2 R2 30126995 (93.0661%) [F] Total mapped reads of (B-2) R2 2244598 (6.9339%) [G] Total unmapped reads of (B-2) R2 193842 (0.5988%) [H] Total unmapped reads of (B-2) after running BLASTn with (G) R2 32177751 (99.4012%) [J] Total mapped reads to host genome ( (B-2)-H) R2 111629 (0.3448%) [I-1] Total mapped reads of (H) to exo. genomes R2 3469.136 [I-3] RPMH of (I-1) R2 3448.363 [I-4] PPM of (I-1) R2 575876.229 [I-5] RPMU of (I-1) R2 170 (0.0005%) [I-6] Total chimeric reads of (I-1) R2 5.283 [I-7] RPMH of (I-6) R2 5.252 [I-8] PPM of (I-6) R2 877.003 [I-9] RPMU of (I-6) R2 ## ----------------------------------------- ##=============================================## # List threshold of RPMU > 1 # List threshold of P-value < 0.001 # RPMH PPM RPMU Total Multi_Reads(All_ExoGenus) Uniq_Reads(This_Genus) wTotal Sum_ReadLength Type Exo Genus Pvalue(Uniq) 680.8208 677.4216 135681.2892 66252 66117 135 21929.217 5014023 ALL_R1 bacteria Acinetobacter 1.17e-58 11.4579 11.4007 2283.4498 459 152 307 369.058 34513 ALL_R1 bacteria Escherichia 0.0 << 1576.8720 1568.9991 314256.0155 50791 0 50791 50791.000 3821557 ALL_R1 viral Lymphocryptovirus 0.0 << 526.4616 523.3092 87392.5723 59618 59487 131 16940.351 4163892 ALL_R2 bacteria Acinetobacter 3.36e-64 10.0011 9.9412 1660.1872 406 143 263 321.814 27933 ALL_R2 bacteria Escherichia 0.0 << 1573.2299 1563.8094 261155.9930 50623 0 50623 50623.000 3790906 ALL_R2 viral Lymphocryptovirus 0.0 519.1002 515.9918 86170.5822 59188 59187 1 16703.478 4135930 ALL_R2 viral Phix174microvirus n/a << 6.2571 6.2259 1246.9884 605 602 3 201.542 41553 R1U bacteria Acinetobacter n/a 0.0310 0.0309 6.1872 1 0 1 1.000 39 R1U bacteria Flammeovirga n/a << 0.0310 0.0309 6.1872 1 0 1 1.000 44 R1U fungi Trichosporon n/a 0.0310 0.0309 6.1872 1 0 1 1.000 37 R1U fungi Candida n/a 0.0310 0.0309 6.1872 1 0 1 1.000 36 R1U fungi Bipolaris n/a << 4.4086 4.3866 878.5878 142 0 142 142.000 10666 R1U viral Lymphocryptovirus n/a << 0.0311 0.0309 5.1588 1 0 1 1.000 44 R2U bacteria Chlamydia n/a 0.0311 0.0309 5.1588 1 0 1 1.000 41 R2U bacteria Tyzzerella n/a 0.0311 0.0309 5.1588 1 0 1 1.000 40 R2U bacteria Acidovorax n/a 0.0311 0.0309 5.1588 1 0 1 1.000 39 R2U bacteria Wolbachia n/a 0.0311 0.0309 5.1588 1 0 1 1.000 36 R2U bacteria Thermomonas n/a << 0.0670 0.0666 11.1173 3 1 2 2.155 170 R2U fungi Colletotrichum n/a 0.0622 0.0618 10.3177 2 0 2 2.000 80 R2U fungi Schizosaccharomyces n/a 0.0622 0.0618 10.3177 2 0 2 2.000 107 R2U fungi Microsporum n/a 0.0622 0.0618 10.3177 2 0 2 2.000 101 R2U fungi Laccaria n/a 0.0359 0.0357 5.9585 2 1 1 1.155 106 R2U fungi Trichoderma n/a 0.0359 0.0357 5.9585 2 1 1 1.155 106 R2U fungi Aspergillus n/a 0.0359 0.0357 5.9585 2 1 1 1.155 105 R2U fungi Trametes n/a 0.0311 0.0309 5.1588 1 0 1 1.000 69 R2U fungi Thielavia n/a 0.0311 0.0309 5.1588 1 0 1 1.000 53 R2U fungi Uncinocarpus n/a 0.0311 0.0309 5.1588 1 0 1 1.000 39 R2U fungi Purpureocillium n/a << 4.2887 4.2630 711.9200 138 0 138 138.000 10197 R2U viral Lymphocryptovirus n/a